Gasterosteus aculeatus (three-spined stickleback): 120811751
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Entry
120811751 CDS
T07457
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120811751 (ptbp2a)
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120811751 (ptbp2a)
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
120811751
NCBI-ProteinID:
XP_040023260
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All DBs
Position
XXI:complement(3195446..3209001)
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AA seq
518 aa
AA seq
DB search
MDGLGDVAVGVKRGSDELSMYNSPNSGVSSVSDGASNGSDSKKLRVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMINYYTTVTPHIRNVPV
FVQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDAINAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLESSVAAAFSKDSNSLLGKIPGALN
PLSAAAAAAAAAGRVALAGQAGSSGVLLVSNLNEEMVAPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLAMSHLNGQKMYGKIIRVTLSKHQTVALPRDGLDDQGLTKDYAN
SPLHRFKKPGSKNFQNIFPPSATLHLSNVPQDVTEEDLRLLFSNAGGTVKAFKFFQDRKM
ALIQMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcctcggtgacgttgcagttggagtgaagaggggatcagacgagctgagtatg
tacaacagtcccaattctggtgtgagcagtgtcagtgatggggcttccaacggcagcgac
agtaaaaagctgcgggtggaggaggccccgccctctcgcgtcctccacatcaggaaactg
cccaacgaggcgtcggagaccgaagtcatcgccctgggcttgccttttggcaaagtcact
aatatcctcacactgaagggaaagaaccaggctttcttggagatggggacagaggaggcg
gccatcactatgatcaactattataccactgttactcctcacatccgcaacgtccctgtg
tttgttcagtactccaatcacaaagaactcaaaaccgacgccggcaatcagcggacccaa
gcggtgctccaggcggtgtcagcggtccagtccggcggctcgcccagctccgatgtccag
gaggctctcgccgcggcctccagccccgtgctgcgcatcatcatcgacaacatgttttat
cccgtgacgctggatgtactgcaacagattttctccaaattcggcacggtcatgaagatc
atcacgttcactaagaacaatcagttccaggctcttctgcagttcagcgatgccatcaat
gcgcagcaggccaaactggctctggatggccagaacatctacaactcatgctgcacgcta
cgcatcgacttctccaagctggtcaacctgaacgtcaagtacaacaacgacaagagtcgg
gactacacgcggcccgagctgcccgccggcgacggccagcccagcctcgagtcgtcggtg
gccgccgccttcagcaaagactccaactccctcctgggtaagatcccaggagccctgaac
ccgctgagtgcggcggcggcggctgcggctgctgcaggcagggtggcgctcgctggacag
gcggggtccagtggggtcctgctggtcagcaacctcaacgaggagatggttgcgccccaa
agtctgtttaccctcttcggggtgtacggcgacgtccagagggtgaaaattctgtacaat
aagaaggacagcgctctcattcagatgtccgacgccaaccaggcccagctagccatgagc
cacttgaatggccaaaagatgtacgggaagatcatccgcgtgacgctgtccaagcatcag
accgtggcgctgcctcgggacggcctggacgaccagggcctgaccaaggactacgccaac
tccccgctccaccgattcaagaaacccggctcaaagaatttccagaacatcttcccgccc
tctgccaccctccatctctccaacgtcccacaagatgtgacggaggaggatctgcggctg
ctcttctcaaacgctggaggaactgtgaaagcgttcaagtttttccaggatcgtaaaatg
gctctgatccagatgtccaccgtggaggaggccatccaggccctgattgacctacacaac
tacaacatgggaggaaaccagcacctccgagtctccttctcaaagtccaccatttag
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