Gasterosteus aculeatus (three-spined stickleback): 120811786
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Entry
120811786 CDS
T07457
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120811786 (scrib)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_13
LRR_1
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
120811786
NCBI-ProteinID:
XP_040023339
LinkDB
All DBs
Position
XXI:14240984..14288656
Genome browser
AA seq
2061 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEVFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRALAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNHLSSLPPELGNLRRLVCLDVSENRLEELPSELN
GLLALTDLLLTQNLLEVVPDSIGCLKQLSILKVDQNRLTHLTDSIGECENLTELILTENL
LQSLPRSLGKLKKLTNLNVDRNRLGGVPKELGGCTSLNVLSLRDNTLGKLPSELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDEHTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDTNLNRVSVIQFQEETKAEEEEDDDAAAERRGLQRRATPHPSE
LKVMKKVIEERRNEAYTSRPDGEEQSPDPQEKRLSDLSNQSNDSQVSNSTLSATSHEERR
NAAAASQRGDLVGGHYHRDEEEQDEMEVEYIEPSVHFAEEPIIRGLHEDDDDDGGEDGES
EEDERPAIPAEKQRLIRKDTPHYKKHFKINKLPKPEAVAALLQGFSPAGMNSPTQAAEQD
EDEEEEEELSLCTPQHHHRMEELQDSRLQVNSSQVKGVSFDQVNNLLIEPARIEEEEHNL
TIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLH
EAEHHTAVEALRSSGSTVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGIAFNME
TTPSVPHQRFSTCLIRNDKGLGFSIAGGKGSTPYRTADTGIYISRIAEGGAAHRDSTLQV
GDRVISINGVEMTEARHDQAVALLTGTSPTISLLVERDPNAPGGSPGQSRARAHSPPPPE
PSDSPDQDEDGLNIHGNNLSRMEDEYPIEEVTMLKSGGPLGLSIVGGSDHASHPFGINEP
GVFISKVIPHGLACESGLRVGDRILEVNAIDLRHATHQEAVRALLANKQEIRMLVRRDPS
PPGMQEIVIQKQPGEKLGISIRGGAKGHAGNPFDSTDEGIFISKVSSSGAAARDSRLQVG
MRILEVNNHSLLGMTHTEAVRVLRAVGDSLVMLMCDGFDPQKMTTVEASPGIIANPFASG
IVRKNSMESISSIDRDLSPEEMEIMQKESEMVRETSQWEREEMEKVERMRLEREEATRLL
EEETENIGTGPLKLDYKTLAALPTTSLQKLNRFSTSESLTAHMEAPPQAQYGAPLEPLGF
GSAHPESDPGPDADRDYLRGSQFAPDGTSSAGSSTPISSLAAEEEESLVDSQPICFKENP
FLVANRRGKGRPAGQQVLSGPPVGYGKGGQLQPWLFNKAAPSDFTRTESPIREAPYSPTI
QPPSHHSSNSSLHAGRETRFANLHFTSTPTANTDSTSSSTRPGAIQPVGRARQSPSPATP
DGHSPNPFQHGPSPFDSQTSPRAPSLTSPDELPMNVKQAYKAFAAVPRSLAVLEPPQDLY
GVRNNFHPKQTPEPELMNEVFDGIDGQEGAGRGPTGTLPLSPDRREYMSLAAVPRLSRPS
WDPKSPSPGGKSSPEQRSFRDRQKYFEIDMKQQTPEKPKPRVSLVGEDDLKKMREEEERK
FEQRAQEYLLDEEEDDEEEDLAKQVAQMKVTGKVLLDGVEYNVEPISSPSQHRATPPSYS
ATPPSYSAKPPDYSSAPPSYNATPPSYNASYCGSSGPPSVDGKGESQRNSLEDGFRVEQR
PTSMTGLIPAYPGDSAAPVRTAKAERRHQERLRMQSPELAVAPDRDLSPAEKRALEAEKR
AMWRAARPCGLEEDVRQYEQDLAKRLYQARVRASQGTADPQPPTSSSSSFSSAAAASQLR
MKSLEQDALKAQMVIAKSRDGKKRGTLDQLTESPSPAPTPSPTPMEELSPRGVTSPGRMS
LSSKKFDYRQFAAIPSSKPVYDIQTPDAVEELQFIDDGSSNPAAAASPDVPATSALEEMA
LYSNKRKLRQGRRSLETAVPT
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcggtggacaagcga
cattgcaacctgcagactgtccccgatgaggtcttccgctacagtcggagtctggaggag
cttctcctcgacgccaaccaactcaaagagctgcccaagcctttcttcagactactgaac
ctacggaagctcggcctgagtgacaatgagatccagagactcccccccgaggtggccaac
ttcatgcagctggtggagctggacatctccagaaatgacattcctgagatcccggagagc
attaagttctgcaaggctttggagatcgcagacttcagtggaaacccgctgtccaaattg
ccggatggtttcactcaactccgagcgctggctcacctggcactcaacgacgtgtcgttg
cagacgttgcccaacgacattggaaacctggccaacctggtaacgttggagctcagggag
aacctgctgaagtctctgccaacgtcgctctcttttctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagttttgccggacaccctcggtgctctccccaacctgagg
gagctgtggctggaccgtaaccatttgtcctcattacccccagagctggggaaccttcgg
agactggtgtgtctggatgtgtctgagaatcgcctggaggagcttccctcagagcttaac
ggcctcctggctctcaccgacctgctgctcacacagaacctgctggaggtcgtgcctgac
agcataggctgtctgaaacagctgtccatcttgaaggtggaccagaatagactgacccac
ctgacggattcaataggcgagtgtgaaaacctcacagaactcatcttgacggagaacctt
ttacagtcacttcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgtagac
cgcaaccgcttgggcggcgtgcccaaagagctgggcggctgtaccagcctcaacgtcctc
tccctgagagacaatacgctgggcaaactgccctctgagcttgcagatgccaccgagctg
catgtgctggatgtggctggaaacagattacaaaacctgccctttgctctgacaaacctc
aacttgaaggccatgtggctcgcagagaaccagtcacagccaatgctcaagttccagaca
gaagacgatgagcacacaggggagaaggtcctgacctgctacttgctgccccagcagcct
tctccaagcctagagaacctgctgcagaacagcgtggacgacagctggacggacacaaat
ctgaacagagtgtcggtcattcagttccaggaggagaccaaggcggaggaagaagaagat
gatgatgctgccgcggaacgcagaggccttcagcgtagagccacacctcaccctagtgag
ctgaaggtgatgaagaaggttattgaggagaggaggaatgaagcgtacacatccagaccc
gatggcgaggaacagtcccctgatccacaggagaaacggctcagtgacctttccaatcaa
agcaacgactcccaggtgtccaacagcactctgtcggcgacttcccacgaggaaagaaga
aatgcggcagcggcctcgcaaaggggcgaccttgtgggcggccactaccatcgagatgag
gaagagcaggatgagatggaggtggaatacattgagccctcagtgcactttgcagaggag
cccatcatccgtggtttgcatgaggacgacgacgacgatggaggggaggatggggagagt
gaggaggacgagaggccggccatccccgcggagaagcagcgcctaatcagaaaggacacg
ccgcactacaagaagcacttcaagatcaacaagctgcccaaaccagaggctgtggcggcg
ctgctgcagggcttcagtcccgccggcatgaactctccgacgcaggccgccgagcaggac
gaggacgaagaggaagaggaggagctaagtttgtgcacccctcaacaccatcacagaatg
gaggagctccaagacagccggctgcaggtcaattccagtcaagtaaagggggtgtcattt
gatcaagtcaataatctgctgattgaacctgctcgaattgaggaggaagagcacaacctg
acaattgtgcgacaaaccggcggcctgggaatcagcattgctggagggaaaggatccacg
ccgtacaagggggatgatgagggaatcttcatttccagagtatctgaagagggtcctgca
gccagagcaggcgttaaagtgggagacaaactcctagaggtgaatggagtggacctccac
gaagcagaacaccacacggcggttgaagcgctccgcagctccggctccaccgtgtccatg
acggtgctgcgcgagcgaatggtggagccggagaacgccatcacgaccacgccgctcagg
ccggaggacgactacttcccgcgcgagaggcggagcagcggcatcgccttcaacatggag
acgactcccagcgtgccgcaccagcggttctccacctgcctcatccgaaacgacaagggg
ctggggttcagcatcgccgggggcaaaggttccacgccctaccgcacggcggacacggga
atctacatctcccggatcgcagagggaggagcagcacacagagacagcacgctgcaagta
ggcgaccgggtgatctcgatcaatggtgtagaaatgacagaggccaggcatgaccaggca
gtagcgctccttaccggcacctcccccaccatctccctcctggtggagcgagacccgaat
gcgccggggggctctccgggtcaatcccgggcgcgagcccactcccctccgcccccagag
ccctccgattcaccggaccaggacgaggacggactcaacattcacgggaacaacctgagt
cggatggaggacgagtatcccatcgaggaagtaaccatgctgaagtcaggtggccctcta
ggcctgagcatcgtgggaggcagtgatcacgccagtcacccgtttggcatcaacgaaccc
ggagtgttcatctccaaggtgattcctcacggcctggcgtgtgaaagtggactgcgcgtc
ggggaccgaatcttagaagtgaacgccatcgacctgcgccacgctacgcaccaggaggca
gtgcgagcgctgctggccaacaagcaggagatccggatgttagtgcgcagggacccgtca
ccgcccgggatgcaggagattgtgatccagaagcagcccggggagaagcttggcatcagt
attcggggaggggccaagggtcacgcaggaaacccctttgactccacagacgagggcatc
ttcatctctaaggtgagttcgagtggtgcggcagcaagagacagccggctgcaggttggc
atgcgtatcctggaggtgaacaaccacagcctgctgggcatgacgcacacagaggcagtg
cgagtgctgcgggctgtaggagactctttggtcatgctcatgtgcgacggattcgaccca
caaaagatgaccaccgtggaggcctctcccggaatcattgcgaacccatttgcttcaggc
atcgtccgtaagaacagtatggaaagcatctcttcgatagaccgagacctgagcccagag
gagatggaaatcatgcagaaggagtctgagatggtgagagagacctcgcagtgggagcga
gaagagatggagaaagtggagcgtatgcgcttggagcgtgaggaggcgacccgcctgcta
gaggaggagactgagaacattggaactggacctctgaaacttgactataaaaccctggcg
gctctgcccaccaccagcctgcagaagctcaacaggttctctacctctgaaagtctgacc
gctcacatggaggcccccccgcaggcccagtacggagcccccttagagcccctgggcttc
ggctcagcccaccccgagtccgaccccggtcccgacgcggaccgcgactaccttcgaggc
tcccagttcgcccccgacgggacctccagcgccggctcgtcgacgcccattagttcgttg
gcggccgaagaagaggagagcctggtggactctcagcccatctgcttcaaagagaacccc
ttcctggtggccaatcgcagaggaaaggggcgtccggccggacagcaggtcctgtcgggg
cccccggtgggctacggcaaggggggccagctgcagccctggttgttcaacaaggcagct
ccctctgatttcaccaggaccgagagcccgatccgagaagccccctactcccccaccatc
caaccgcccagccaccactcttccaacagctccctgcatgcaggcagggagacgcgcttc
gcaaaccttcatttcacctccactcctacagccaacactgacagcacgtcttcatcaact
cggccgggtgccatccagcccgtcggccgcgcgcggcagagtccctcccccgccactccg
gacggccacagtcctaaccccttccagcatggcccctcccccttcgactcccagacctct
cctcgcgccccctccctcacctcgcccgacgagctccccatgaatgtcaagcaggcgtac
aaggcgtttgccgccgtgcctcgctctctggccgtgctggagcccccccaggacctgtat
ggcgtgaggaacaacttccacccaaagcaaactccagagcctgagttgatgaacgaggtg
tttgatggcatagacggtcaggagggggccggtaggggtccgaccggcacgctccccctc
tcccctgaccgccgggagtacatgagcctggcagcagtgcctcgcctctccaggccttcc
tgggacccgaagagtccatctcctggtggtaagtccagcccagagcagcgctccttcagg
gacagacagaagtactttgagatcgacatgaagcagcagacgccagagaaacccaaacct
cgcgtgtctctcgttggcgaagatgacctcaagaaaatgagggaggaagaagagaggaag
tttgagcagcgggcgcaggagtacctgctggatgaggaggaggacgatgaggaagaggac
ctggctaagcaggtggcgcagatgaaggtgactggcaaagtgttgctggacggagtggag
tacaacgtggagccaataagcagcccgtcacagcaccgcgccacgcccccgagctacagc
gccacgcccccgagctacagcgccaagcccccggactacagctccgcgcccccaagctac
aacgccacgcccccgagctacaacgccagctactgtggcagctccgggcctccctctgtt
gacgggaagggggagtcccaaaggaattccctggaggacggcttcagggtggagcagagg
cccacctccatgaccggtctgatcccggcgtacccgggagactcggcggctcccgtccgc
acggccaaagcagagcgcagacatcaggagagactccgcatgcagagccccgagctggct
gtggcccccgacagggacctgtccccggctgagaaacgagctctggaggctgagaagaga
gccatgtggagggcagcacggccctgtggcctagaggaggatgttaggcagtatgagcag
gacctggctaagagactctaccaggcccgagtgagggcatctcagggcacggccgacccc
cagccccccacctcttcctcctcctccttctcctctgcagcagcagcctcacagctcagg
atgaagtctctggagcaggatgcactgaaagcacagatggtcatcgccaagtcgcgtgac
ggaaagaagcgcggcacactggaccagctgacggagtcgccgtcgccggccccgacgccc
tctcccacgcccatggaagagctcagtcctcgaggagtaacgtcgcctggacggatgtcc
ctgtcgtcaaagaagtttgactaccgacagtttgccgccattccttcttccaaaccagtg
tacgacatccagacccccgacgctgtcgaggagctgcagttcattgacgacggctccagc
aacccagcggccgctgcgagtccagatgtgcctgccacctcggctctggaggagatggcc
ctgtacagcaacaagcgcaaactgaggcagggccgccgcagcctggagaccgccgtgccc
acgtaa
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