Gasterosteus aculeatus (three-spined stickleback): 120811867
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Entry
120811867 CDS
T07457
Symbol
arfgef1
Name
(RefSeq) LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120811867 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120811867 (arfgef1)
Membrane trafficking [BR:
gat04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
120811867 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
120811867
NCBI-ProteinID:
XP_040023509
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All DBs
Position
XXI:11312119..11346840
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AA seq
1905 aa
AA seq
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MFEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSAAGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDNT
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQLERERHRQQTEPDSPQLEAHG
HPQAKSPSREADGAVTPPTPSATTPPTPSTPAPEGGSRSASAGREEPREGDGXAEERERG
PVYESPEAENDATGQQHPEAGDEEEEGTPNYEEKAQEIVQSILQDVVNTVAGGHCLDPAN
LCSDTKECGKGDPAESDPAEAAMDGPQSSLEDEGTLGSDSEHVHANGIPGTPISASFTPS
LPDDRLSLSSTDTQESGAAPGQPPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKS
HELRSKVLSLQLLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSI
FLTLLSHFKTHLKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYV
NYDCDLNAANIFERLVNDLSKIAQGRGGHELGTTTLQELTLRKKGLECLVSILKCMVEWS
KDQYVNPNSQTSLGQEKPAEQESTETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTD
NPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQ
VGEFLGDNDRFNKEVMYAYVDQMDFQGKDFVSALRTFLEGFRLPGEAQKIDRLMEKFAAR
YLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPE
EYLSAIYDEIAGKKIAMKETKELTMKSSKQSVASEKQRRLLYNVEMEQMAKTAKALMEAV
SHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACI
FCIQLERDAYVQALARFTLLTASSGISEMKQKNIDTIKTLITVAHTDGNYLGNSWHEITK
CISQLELAQLIGTGVKARYISGTVRSKEGFITSTKEQSNDEYLGLVGGTVDRKQIASIQE
SIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVE
ISYYNMGRIRLQWSRIWEVIGDHFNKVGCNSNEDVAIFAVDSLRQLSMKFLEKGELANFR
FQKDFLRPFEHIMKKNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDE
SIVELAFQTTGHIVTNVFEKHFAATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCA
KYVSERPQAFKDYTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEV
MKTYGHTFEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAISDVFTQYFE
SLNDVLLDDILAQLYWCVQQDNEQLARSGTNCLENVVILNGEKFSLETWDKTCNCMLDIF
KTTIPHALLTWRPAGAEGEHLTAPGLSDKPLDSISQKSVDIQTRHDDQHSISSGDRAAAD
NRRQSQYSSASGMCEDGSRSRTPMKAQGQRLFTALLIKCVVQLELIQTIDNIVFFPATSK
KEDAENFASAQRDASCAVDVPAETQAQGMYRYLTSEQLFKLLDCLLESHGFAKAFNSNNE
QRTLLWKAGFKGKSKPNLLKQETSSLACGLRILFRMYTDESRRDAWEEVQRRLLDVCSGA
VAYFLALTSESHREAWTNLLLLFLTKVLKISDERFKVHASRYYPLLCEIMQFDLIPELRA
VLRKFYLRIGLVFHIARLPEPEPQPAPSEQKAEPEVGDGDGDEAE
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagggcaaaaagacgaaaaacatgttcctcacacgagctttggagaagatcctg
gccgacaaggaggtgaagaaggctcaccattcgcagttgcgcaaagcgtgcgaggtggca
cttgaggaaatcaaagaggaatcagaaaaattaagtccgccgagcgcggcaggcaaatcg
ggctccagcaccttgccgccaatcaagtcgaagaccaacttcatcgaagccgacaagtac
ttcctgccgtttgagctggcatgtcagtccaaatgtccccgcatcgtcatcacctcgctc
gactgcctgcagaagctgatcgcgtacggccacctgacgggcagcgccccggacaacacg
gccccgggcaagaagctcatcgaccggatcatcgagaccatctgcgcctgcttccaaggg
ccgcagacggacgagggcgtgcagctgcagatcattaaggccctgctgacggcggtgacc
tcccagcacatagaaatccacgagggcaccgtgctgcaggccgtgcgcacgtgttacaac
atctacctggccagcaagaacctcatcaaccagaccacggccaaggccacgctcacgcag
atgctcaacgtcatcttcgctcgcatggagaatcaagctctccaggaagcgaagcagctg
gagcgagagcggcaccggcagcagactgagccggactcccctcagctggaggcccacggc
cacccgcaggccaagagtccgtcccgggaggccgacggggccgtcacccctccgaccccg
agcgccactaccccgcccaccccctcgacacccgccccggagggcggcagcaggtctgcg
tctgctgggcgggaggagccgagggagggagacggataggcggaggagcgggagcggggc
cccgtctacgagagcccggaagcagagaacgatgcaacaggtcagcagcacccagaagca
ggtgacgaggaggaagaggggacgcccaactacgaagaaaaagcccaggagatcgttcag
agtattttgcaggatgtggtcaataccgtcgcaggaggacactgcctggaccccgcgaac
ctctgctccgacacaaaggagtgcggcaagggcgacccggcagagtcggacccggctgag
gcggcgatggacggaccccagagctccctggaggacgagggcaccctgggtagcgacagc
gagcacgtccacgccaacggcatccccggcacgcccatttccgccagcttcaccccctcg
ctgcccgatgaccggctgtccctgtcgtccaccgacacccaggagtcgggcgccgccccg
ggacagccgcccggcgcaaagttctcccacatcctccagaaagatgcctttcttgtcttc
cgctcgctctgcaagctgtcgatgaaacctctgtcggatggaccacctgatcccaagtcc
cacgagctgcgttccaaggtcctgtccctccagctgctcctgtccatcctgcagaacgcc
gggcccatcttcaagaccaacgagatgttcatcaacgccatcaagcagtacctgtgcgtg
gccctgtccaagaacggcgtctcctctgtgccggaggtctttgaactctccctctccatc
ttcctcacgctgctctcccacttcaagacgcacctgaagatgcaaatcgaggtgttcttc
aaggagattttcctgtacattctcgagacgtccacaagctcctacgaccacaagtggatg
gttattcaaaccctgacaagaatatgtgcagatgcccagagtgtggtggacatctacgtg
aactacgattgtgacttgaacgctgctaacatattcgagcggttggtcaatgacctctca
aaaattgcgcagggtcgcggaggccacgagctcggcacgacaaccctacaggagctgacc
ctgagaaagaaaggccttgaatgtctagtgtccatcctgaaatgtatggtagaatggagt
aaagaccaatacgtcaaccctaactcccagaccagcctcggccaagagaagccagcggag
caggagagcacggagaccaaggccccggagaccataaaccgctacgggagcatcaactcc
ctggactccacggcctcgtccggcatcggcagctacagcacccagatgtccggcacagac
aaccccgagcagtttgaggtcctcaaacagcaaaaggagatcattgagcaaggcatcgac
ctgttcaacaagaaaccaaagagagggatccagtaccttcaagagcaaggcatgctgggt
acaaccccagaggatctggctcagttcttgcaccaggaagagaggcttgattcgactcag
gtgggagaattcctcggagataacgatcgtttcaataaagaggtgatgtacgcatacgtg
gaccagatggacttccaaggcaaagactttgtctccgcactgaggacgttcctggagggc
tttcggctgcccggagaggcccagaagatcgaccggctcatggagaagtttgcagcgaga
tatcttgaatgcaatcagggacaaaccctctttgccagtgctgatacggcgtacgtcctt
gcctactccatcattatgttgacgacagaccttcacagtccacaggtgaagaataaaatg
acaaaagagcaatacatcaaaatgaaccgcggcatcaacgacagcaaagacctacccgag
gaatatctctcggccatctacgacgagatcgccggaaagaagatcgccatgaaggagacg
aaagagctcaccatgaaatccagcaagcagagtgtggccagcgagaagcagaggcgtctg
ctctacaacgtggagatggagcaaatggcgaagacggccaaagctctgatggaggccgtc
agccacgtccaagctcccttcaccagcgccacacacctggagcacgtccggcccatgttc
aagctggcgtggacaccgttcctggcggccttcagcgtgggtctacaggactgcgatgac
acggaggtggcctcgctgtgtctggagggcatccgttgcgccatcaggatagcgtgcatc
ttctgcatacagttggagagggacgcgtacgtgcaggccttggcgaggttcaccctgctg
accgccagctctggcatctccgaaatgaagcagaagaacatcgacaccatcaagactctc
atcactgtggcccacacagacggcaactacctcggcaactcttggcacgagatcaccaag
tgcatcagtcagctggagctggctcagctgatcggcacaggagtgaaggcgcgctacatc
tcagggacggtgaggagcaaagaggggttcattacgagtaccaaggagcagagcaacgac
gagtacctcggcctagtcggggggacggtggaccgtaagcagatcgccagcattcaggag
tccatcggagagaccagctctcagagcgtggtggtggctgtggacaggatattcaccggt
tccaccagactggatggtaacgcaatagtggattttgtgcgctggctgtgtgccgtgtcc
atggatgagctggcctcgcccacacacccacgcatgttcagcctgcagaagatagtcgag
atctcttactacaacatgggccgcatcaggctgcagtggtccaggatctgggaggtcatc
ggagaccacttcaacaaggtcggctgcaattccaatgaagatgtggccattttcgcggtg
gactctctcaggcaactgtccatgaagtttctggagaagggggagctggctaacttcaga
ttccagaaagactttctccgaccttttgagcacatcatgaaaaagaacaggtcccccacc
atcagagacatggtggtgcgctgtatagctcagatggttaactcccaggcagcgaacatc
cgctcgggctggaagaacatcttctctgtcttccacctggcggcttctgaccaggacgag
agcattgtggagctggccttccagaccaccggccatatcgtcacgaatgtatttgagaaa
cactttgcggccacaatcgactccttccaggacgccgtcaagtgtctgtccgagtttgcc
tgcaacgcctccttcccggacaccagcatggaagccatccgcctcatccggcactgcgcc
aaatacgtctcggagaggccacaggccttcaaagactacaccagcgatgacatgaatgta
gcgcctgaggaccgtgtgtgggtgcgggggtggttccccatcctctttgagctctcctgc
atcatcaacaggtgtaagctggatgtcaggaccagggggctgacggtgatgtttgaagtg
atgaagacatacgggcacacctttgagaagcactggtggcaagaccttttcagaatagtc
ttcaggatcttcgacaacatgaagctcccggagcaacagaccgagaaagcggagtggatg
accaccacctgcaaccatgcactttacgccatctctgatgtgttcacccaatactttgag
tccctcaacgacgtcctgctggatgatattctggctcagctctactggtgtgtgcagcaa
gacaatgagcagctcgctcgttcaggcaccaactgtctagagaatgttgtaatcctgaat
ggagagaagttctccctggagacctgggacaagacatgcaactgcatgctggacatcttc
aagaccaccatcccacacgcgctgttgacatggagaccagcaggagcagagggagaacac
ttgacagcaccgggcctctcagacaaaccgctggactccatttcccagaagtctgtggat
attcagacccgccatgacgaccagcactccatcagcagcggcgatcgggccgccgcggac
aaccgtcggcagagtcagtacagctcagcctcaggcatgtgtgaggacggctcccgcagc
aggaccccgatgaaggcccaggggcagcgcttattcacagctttgctgataaagtgcgtc
gtgcagcttgagctcatccagacgatcgacaacattgtgttttttccggccacaagcaag
aaggaagacgccgagaactttgcttccgcccagcgggacgcctcgtgtgcagtcgacgtc
ccggcggagacccaggcccaaggcatgtaccgctacctgacctcagagcagctcttcaag
ctgctggactgcctgctggagtcgcacggcttcgccaaggccttcaactccaacaacgag
cagcggaccttactgtggaaagcaggtttcaaagggaagtcgaagcccaacctgctgaag
caggagaccagcagcctggcgtgcggcctgcgcatcctgtttcgtatgtacacagacgag
agccggcgggacgcctgggaggaggtccagagacggctgctcgatgtgtgcagtggggct
gtagcgtacttcttggctctgacctcagagagccacagagaggcctggaccaacctgctg
ctgctcttcctcaccaaggtgctgaagatcagtgacgagaggttcaaggtgcatgcgtcc
cggtactaccctcttctgtgtgagatcatgcagttcgacctgatccccgagctgcgggcg
gtcctcagaaagttctacctgcgcatcggcctcgtgtttcacatcgcgcggctgccagaa
ccagaacctcagccggcacccagcgagcagaaggcggagccggaggtcggggacggggac
ggggacgaggccgagtga
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