Gasterosteus aculeatus (three-spined stickleback): 120811873
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Entry
120811873 CDS
T07457
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120811873
Cell adhesion molecules [BR:
gat04515
]
Cadherins
Major cadherins
120811873
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_CELSR2_9th
Stevor
DUF443
Fibulin_C
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
120811873
NCBI-ProteinID:
XP_040023517
UniProt:
A0AAQ4NX74
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Position
XXI:complement(16040433..16110337)
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AA seq
803 aa
AA seq
DB search
MLTRNCLLLFLWILVDGGSVSSLHPPSPALGRSRPAREHARGSVGPMRNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDGGDNAVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDIDTNRPLEPESEFVIKVQDINDNEPKFLEGPYTASVPEMSPV
GAYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTFVNITLSDVNDNPPRFSKSFFHLRVPESSSVGSAVGRIKAHD
LDIGRNAEVEYTIVPGDGGAMFDITTNDHNQEGIIILKRHLDYESKKAYTFKVDATNAHL
DPRFQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASG
SPVRYSIDWKSDLDSYFDIDPVEGTISTNELLDRESIARHNISIVATKLNSPVLTSRVAV
AVNVLDINEFPPELAGHHETFVCENAKVGQVIQTLSAKDEDLPTAGQQFSFRSPKEDIKN
KNFTIRDFGNNTAGIVTKRNGFRRRLQEIYLVPVVIDDNGYPPKSSTGTLTVRVCGCESN
GSLLTCSAEAIFLPVGLSTGALVAILLCIIILLVIVVLYVGLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLFRRDVKPETKRGPRPPVSQDSADIRDF
IAERLREHDVDNAAPPYDSLATYAYEGGGSVAESLSSIDSVAVGLGEDYDYLGDWGPRFK
TLAGIFGERSETQSDSNATENPH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaaggaactgcctgctgctgttcctttggattcttgttgacggaggctcagtc
tcttctttgcatccaccttcgccggcactgggacggagcaggccggcgcgggagcacgcc
aggggttcggtgggcccgatgaggaatggggcggctggatttcagcgggtcaaaaggggc
tgggtgtggaaccagttctttgtgctggaggagtacatggggtcggacccgcagtacgtg
ggcaagctgcacactgacctcgacgggggggacaatgcggtgaagtacactctctcggga
gacggtgccggctccattttcacaattgaccaaacgaccggggacatccatgccttaagg
agtcttgacagggaggagaagccttactacacccttcgcgcccaggccgtcgacatcgac
accaacaggcccctcgagccggaatcagagtttgtcatcaaggttcaagacataaacgac
aacgagccgaagttcctggagggcccttacacggccagtgtccccgagatgtccccagta
ggggcgtatgtgacccaagtgacagccacggatgcagatgaccccacctatggaaacagt
gccagagtggtctacagcatcctccatggccagccctacttctctgttgaccctaaaact
ggtgttataaagacagccttgcccaacatggaccgggaggtgaaggagcagtaccaggta
ttaatccaggccaaggacatggggggccagctgggggggctggccgggaccaccttcgtc
aacatcaccctcagcgacgtcaacgacaacccgcccaggttctccaaaagtttcttccac
ctacgagttccagagtcctcgtccgtgggttccgccgtgggcagaatcaaagcccacgac
ttggacatcgggaggaacgccgaggtggagtacaccatcgtgccgggggacggaggcgcc
atgtttgacatcaccaccaacgaccacaaccaagaggggatcatcattctcaaaaggcac
ctggactacgaaagcaagaaggcgtacacctttaaggtcgatgccaccaatgctcatctg
gatccacggttccaaagcttcggggccttcaaagacacggccacagtgaagattaacgtt
ttggatgtggacgagcccccggtgttcaataagccctcctatgtgatggatgtgtacgag
gacacgcccgcgggcaccatcatcggagcggtgacggcgcaggatctcgacgccagcggc
agtccagtcaggtattccatcgactggaagagtgacttggacagctactttgacatcgat
ccagtggagggaacgatttcgacgaacgagctcctcgacagagagagcatcgcccggcac
aacatctccatcgtggccaccaaactcaatagtccagtgctgaccagccgggtggccgtc
gccgtcaacgtgctcgacatcaacgagttcccgcctgaactcgccggtcaccacgagacc
tttgtttgtgaaaacgccaaagtgggacaggtgattcagactctcagtgcaaaagacgag
gatctaccgactgctggacaacagttctccttcagatcaccaaaggaagacataaaaaac
aagaacttcaccatccgagactttggcaacaacacggctgggattgtgacgaagcgcaat
ggcttcagacggcgtctgcaggagatctacctcgttcccgtggtgattgacgacaacggc
tacccccccaagagcagcaccggcaccctgaccgtccgggtgtgcggctgcgaatcgaac
ggctcgctgctgacctgcagcgcggaggccatctttctccccgtgggtctcagcacagga
gctctggtcgccatccttctgtgtatcatcatcctgttagtaatcgtggtactctacgtg
ggcttgaggcggcagaagaaaaaagaaaccctcatgtcgtccaaagaggacatccgggac
aacgtgatccactatgacgacgaaggcggcggcgaggaggacacgcacgcattcgacatg
gggacactccgcaaccccaaggtcgtcaaagagaatctgttccgccgggacgtcaaaccc
gagacgaagagaggtcccaggccgccggtgtcgcaggacagcgccgacatccgagatttc
atcgccgagcggctgcgggagcacgacgtggacaacgcggcgccgccctacgactcgctg
gccacgtacgcctacgagggcggcggctccgtggccgagtcgctcagctccatcgactcc
gtcgccgtgggcctcggggaggactacgactacctcggggactgggggccccgctttaag
acactggcggggatatttggggaacggtcggagacccagtcggactcaaacgccacagag
aatccacattga
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