Gasterosteus aculeatus (three-spined stickleback): 120811927
Help
Entry
120811927 CDS
T07457
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811927 (irx5a)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120811927 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
120811927
NCBI-ProteinID:
XP_040023621
UniProt:
A0AAQ4R386
LinkDB
All DBs
Position
II:complement(17410605..17414690)
Genome browser
AA seq
458 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVVSKLKGSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYR
KNATRDATATLKAWLGEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWTPRNRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLLDPGDTGCDRFKEET
HGKDTDPLLSDSELKDPEERTTELLPDSAKPTTSSPSALPRGNQAAAAQQDKPSDLSLAT
GSVTSNATSVIHSPPSAPKPKLWSLAEIATSTDRCKGSGEGPQAGPGLGQIAAMGTNASP
SRSSPQCPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHGNHGSVTTGSTAHFNGLNQT
VLNRAEALVRESQKVRSQTQVDLCKDSPYELKKGMSNI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatccgcagggctacttgtaccagccgtccgcgtctctagccctgtattcgtgc
cccgcgtacagcaccagcgtgatatcgggaccgaggaccgaggaacttgggagatcctct
tcgggatctgcttttgcgccttacgccggatctaccgcgttcaccagcgcctcgccgggc
tacaactcccacttgccatacagcgcggacgcggccgcggctgccacattcacctcgtac
gtggtgagtaaactaaagggctctccctatgaccacaccacgggcatggcgggctcaatc
ggataccatccttacgcagcacccttgggctcctacccttacggtgacccggcgtatcgt
aaaaacgcaacgcgggacgccaccgccaccctgaaggcctggctcggcgagcaccgcaag
aacccctacccgaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctc
acccaggtgtccacctggttcgccaacgccaggcggaggctaaagaaggagaacaagatg
acctggaccccccggaaccgaagcgaggacgaggaggaagacgagaatatcgatttggag
aaaaacgatgacgatgagccaaacaagcccacggacaagggagactccacggacacagaa
gcagatcataaactgctggacccaggggacacgggctgtgacagatttaaagaggagacc
catggcaaagacacggatccccttctgagcgactcggagttaaaagacccggaggagcgg
actacagagttgctgccggattccgcgaaaccgaccacgtcgtctccctcggcgctgccc
cgagggaaccaggccgccgccgcgcagcaagacaagccgtcagatttgagcctggcgacg
ggctcggtgaccagcaacgcgacctctgttatccactcgcccccctcggccccgaaacca
aaactctggtccctggcggagatcgccacctccacagacaggtgtaagggcagcggcgag
ggcccacaggctggccccggtttgggtcagatcgcggcgatgggcaccaacgcgtctcca
tcgcggtcctcccctcagtgcccgctccccaacagcacggtgctatccaggcctctgtac
tacacctcccctttctacccgggctacacgaactatgggggcagttttggacatcttcac
ggtaaccatggctcggtaaccacgggctccacggcacatttcaatggattaaaccagact
gtgttgaatagagcagaggctttggtaagagagagccagaaagtcagaagccaaacgcag
gtagatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
DBGET
integrated database retrieval system
