Gasterosteus aculeatus (three-spined stickleback): 120811973
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Entry
120811973 CDS
T07457
Name
(RefSeq) uncharacterized protein LOC120811973
KO
K19538
retinitis pigmentosa 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120811973
04812 Cytoskeleton proteins [BR:
gat04812
]
120811973
Cilium and associated proteins [BR:
gat03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120811973
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
120811973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
120811973
NCBI-ProteinID:
XP_040023681
LinkDB
All DBs
Position
XXI:13847394..13858331
Genome browser
AA seq
2424 aa
AA seq
DB search
MNESAFRRALPEQSFGSGRTSGTPRHPSLIHPILSKRVCFYKSGDPQFNGLRMVINSRTF
KTFDALLDSLSRKVPLPFGVRNITTPRGVHAVRTLDELEDGKSYICSDTRKVKPIDLALA
RKKPAPWYHARPVSPRRRSAQQARFFPGGNNHRQESVSFARTPKILSVFRNGDAGVKHSV
VLHKRTTPTFESILECISELMQFQVVKLHAADGRRVDGFPGLILCSGTVVAAGREPFRPA
NYNAQISPAQSTSPTKQIGPRRPRALKRKKKSKPYTPKSRHFSLSSERYIVDRIHNSITG
GPCDRPGHSVELESGHMLESVAETPDTGLCVAAGERDGRQLPSDDDIEKSFRVNQDGSMT
VEMRVRLTIKEEETIHWTTTLARSSVASQLNATCSPETGPEQQINSLKSNSLDSESPASS
INKDKTRDNNDEDPPSLGNGVLSESNNEEDPRSPPTPGHRHIRIEQASVEGVQSGAVEGI
REGVVGSYSYREQAQSGAVTEQYCVVKQRSSRPVPKPRRQSSVDANNVNGRNVPTFKSAG
MSEIQRIESSGGEVTETVLHVYEQQTCQDNFFANLCSQDMSAFGIPFCRPATSETGQLSS
NEEFEPPPWRPSTASESISIWRAESTSVTSALNLPSRGPGAIQAVDAQQRLPKPTVGQPG
PQQKEGNKDRRVSSKPKVINKRVRRLKLPGKKRKENSAGVPEKNGKVKTFTSAGFIKKIY
GNKSKSVKSTMKLKKGPDRVTTGSSQQLDDTVKCVLKDLNVPLASKETTSETVSSEKGRL
NVAPIEVSQHGGMLERQTSMHQEKKKENECCDVSESMSLPAFNSSSAVTKEYVESWLEKA
CLNPSAYSDEASKKKAALTFVQTENARCVESEKKKGLTFVADDEKGLEDTSGEPNGPLPQ
DELEASVKQRIRSFESKPSGQSTKKAAVKQQIVYSHETTTNTENYLTLARNNTDQTKPLV
CCEIVPPINDTSTEIPPGIRVDDKSSTIQISFKKEAPSKELPTPVGNTDLPEYSMTGGSS
EAGGLMPRLGSQTPRKHPLSVSRTSDRAESPADRAMETTATVHPDTCAHSAAPLPRTPSI
KRAPLVSNKSLDRKMSLRKACLEKYTLCSDATSETSASSTPINPVGDNVVPNGVCSTGTQ
RPSEGRAEETQRSNSISDVRSSPSCGTSASPASSTSEERMSSSGISSSLAPTPSDLSLKD
TKTDKTHSFPQKKEAMSPQPLVKSVKHSSPSPGRKSPSEPQNSPELSSFHNHPPDAGLHQ
TSNAGSSTERKLNRPKSHRRRSPYSQSLDMASSPVKHKAAGRRRHKTPRATNSAAEQQTA
TGSALASLDVDRCDESKTADDPEEPVAQIVPRQLNTVNQANMKPVLETICYSIKSIRRIT
QNKRPSCLEKSNSLPDFSSHVASTFGSSSQALLAFLSVMTLKEGLDDMNMDKLDANNVSC
AEALKMIDSLRKIASIDDSQELKASLSSLQRSASKQLLQSWKGFQDLSDKHKSPTPNDSE
PEAAIEAVSGCRVEETVVGEIVDSLDIPERLKEELNCLSKVKINSDDEEPTERAKTKNNS
NAEISKFSTDYGVSVGDVAKDDKDDVDVSSIIKKFTDVNQPKQSNAGGRTKDSRDKDSLG
NGSDKCPPAHPTNKHTPEGKQLCSSALFAEDNEHNGVKSNQDQAQANGVVSGYTILAQDT
GASDAEEHDGDRLQVHGEASASGSELRRCEEEEGRRIPRAAKDLEREALCQQSVSVSEAG
EQHSSEDEGEVEWGSDEDKQATSDYDAELDVRRKDGTSSRESHHKPLSEEELPEVACQSA
CTGSNSSVDESTCDPDVDDPSSEEEQPEVEGMRLKVIFEESVLGSEEEEEEHLDYLPDHM
QPTRKYRESKALMEETEEDSVSSHEEGRDADETHVCDTVEGDPSHFILNQDSYILKDKSS
CIKSDILTQMYGLNEDEDSGNDHSSCEQHAETEQPKDEGKPPNTSSYEDKESCSSEEEGV
HIDRYTEDSCTEYQGAPPHAKDTTREKAVEIPQHQTEGIISQSVAARVILLEKQVAVAQK
TTESSATRRSSQRKAPLGRDEEDSPSESPASRPAAGAQSPPQSSLSFSYDSSGVVTSEPE
GHRVRSIREMFLAKAATDVQHRCLPSSKTSEARAETSASGGYQTQTSSEPSSSEDDSARR
SITKGFVRRTIERLYGKKDARPDQEAGGRPPSAPKQQKQEHLSAFSPFHVSRSKAMSEFS
YFNSTHAVEPLSDATRCVAFNAELRPEDNEQWFLREKALIRKSASEPVAINKGFTNSQGG
EMCEDAEEDPPYSLFSTKSELEDNQSSLSRKCTYFSLPHTSDSDAHLEESSAVSRTGGNG
QSAADTKEDSQDAGTRAERGGALPAVADFKRKDNKVHPATEPPPDGEVVLVQPGKRQGVM
SRRVEEPDVLDILYNFCGQNCPIL
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtcggcgtttcggagggccctccctgagcagtcattcgggagtgggcgcacc
tctggcaccccccgccacccgagcctcatccacccgatcttatcgaagagggtctgcttc
tacaagagcggagacccccagttcaatggcctgcgcatggtcatcaacagccgcaccttt
aaaacgtttgacgcgctgctggacagcctctctagaaaggtccccctgccgttcggggtg
aggaacatcaccacgccgaggggggttcacgccgtccgcaccctggacgagctggaggac
ggaaaatcctacatctgctccgacactcgcaaggtgaaaccgatcgacctggctctggcc
aggaagaagccggcgccgtggtaccacgccaggcccgtcagcccccgtcgtcggagcgcg
cagcaggcccggtttttccccggcggaaacaaccaccggcaggagtcggtgtcgtttgcg
cgcacgccgaagattctgtcggttttccgcaacggggacgccggcgtgaaacactcggtg
gtgcttcacaagaggaccactcccacttttgaatccatcctggaatgtatttcagagctg
atgcagttccaggtggtgaagttgcacgcagccgatggccgacgcgtggacggctttcca
ggcttgattttgtgttctgggacagtagtggctgcgggccgggagccgttcaggcccgca
aattacaatgcacagatttcaccagctcaaagcacgtcgcctaccaaacaaataggtccc
agaagaccgagggctttgaaacgtaaaaaaaagtcaaaaccatacactccaaagtcgaga
catttctccctgtcgtcggagaggtacatcgtcgaccgcattcacaactccatcacagga
ggtccgtgcgaccgacctggtcactctgtcgagttggagtcgggccacatgctggagtcc
gtcgcggagacgccggacaccggcctctgcgtcgcagccggggagcgggacggccgtcaa
ctgccctcggacgacgacatcgagaagtcctttcgagtgaaccaagacggcagcatgacg
gtggagatgagggtgcggctgacgattaaggaagaggaaaccattcattggacgaccact
ctggcgcgttccagtgtggccagtcagctcaatgcgacctgttcaccagagaccgggccg
gagcagcagatcaactcactgaaatcaaactcactggattcagaaagtcccgcctcctcc
atcaacaaggacaaaactcgggataacaacgacgaggatccaccttcgctgggcaacggc
gttttgagtgagagcaataatgaagaggatccaaggagcccccccacaccagggcacagg
cacattagaatagagcaagcctccgtggagggcgtccaatcaggggcggtagaggggatt
cgggaaggcgtggtcggctcgtactcgtaccgagagcaggcgcaaagcggggccgtgacg
gagcagtactgcgtggtcaaacagaggagcagcaggccggtgcccaaaccgagaagacag
agctctgtggatgccaacaacgtaaatggtagaaacgtacccactttcaagtcagcgggg
atgtctgagatccaacggattgaatccagtggaggggaggtcactgaaaccgtcttacac
gtgtatgaacagcagacatgccaggataatttcttcgcaaacctttgttcacaggatatg
tctgctttcgggatacctttttgcaggcctgctacttcagaaaccggccagctctcctcc
aacgaggagtttgagcctccgccctggaggccgtcgacagcttccgagtcaatcagcatc
tggagggccgagagcacgtcagtaacatctgccttgaacttgccttcacgggggccgggc
gcgattcaagcagtagacgctcagcaacgattgccgaagcccaccgttggccaaccggga
ccccaacaaaaagagggcaacaaagataggcgagtgtcatcgaaacccaaagtgatcaac
aaacgcgttcgccggcttaagttgccggggaaaaagcgaaaggaaaattccgcaggagta
cctgagaaaaatgggaaagtgaaaactttcaccagcgctgggttcattaagaagatttat
gggaataaatcaaaatcagtaaaaagcacaatgaagctaaaaaagggcccagacagggtt
acaacggggagctctcaacagctggatgacacggtaaaatgtgttctcaaagacttaaac
gtaccattggcatcgaaagaaactacaagcgagaccgtttcttcggaaaaaggccgactg
aatgttgctcccattgaagtaagccaacacggggggatgctggaacggcagacgtcaatg
catcaggagaaaaagaaagaaaacgagtgctgtgatgtcagcgaaagcatgtccttgcct
gcgtttaactcctccagcgctgtcactaaagagtatgtggaaagctggctggagaaagcc
tgtctcaacccctcagcctactccgatgaggcaagtaaaaaaaaagcagcacttactttt
gtacaaacggaaaacgccaggtgtgtggagtctgaaaagaagaaaggtttgacgtttgtg
gcagacgacgaaaagggtttggaggacacgtcaggggaaccaaatggcccgctgcctcaa
gatgagctggaagcttccgtcaaacaaagaatccggtcctttgaaagcaaaccatcaggt
caatcaacgaagaaagccgcagtcaaacagcaaattgtgtacagtcatgaaacgactaca
aacacagaaaactatctgactttagctcgcaataacacagaccaaactaaacctcttgtc
tgttgtgaaatagttccgccaattaatgacacatctacagaaattccaccgggcatcaga
gtggacgacaaatcaagtacaatccaaatctcatttaaaaaagaagcaccttcaaaggag
ctaccaacacctgttggaaatacagatctaccagaatattccatgacgggtggatcctca
gaggccggcggcctgatgccgaggctcggcagtcaaacgccacgcaaacacccgttatcc
gtcagccgtacctctgatagggccgagtcacctgccgaccgcgcaatggaaacgacagcg
accgtccaccccgacacctgtgcgcacagcgcggcgccattaccgaggactccatccatt
aaaagggcccctttggtcagtaacaaatctctagacaggaaaatgtctctcagaaaggct
tgtctggagaaatatacgttatgtagcgatgccacctcagagacaagcgcctcgtctact
cccatcaacccagttggcgataatgtggtgccaaacggcgtctgttcaacagggacgcag
cgacccagtgaaggccgagcggaagagacgcagcgatcaaacagcatctcagatgtgaga
agcagtccgtcgtgtggtacttctgcatccccggctagttcaacatctgaagagaggatg
tcatcatccggtatttcatcgagtttggctccgacaccgagtgatctttcacttaaagac
acaaaaacagataaaacacattcatttcctcaaaaaaaagaagcaatgtcaccccaaccc
ctggtgaaaagcgtcaaacatagcagtccatctccagggagaaaatcaccttctgaacct
caaaactctccagaattatcatcattccataaccaccctccagatgctggattacaccaa
acatcaaatgctggctcttccactgagagaaagctcaatcgaccaaaatcacataggagg
cgatctccatactctcagtctcttgacatggcgtcatctcccgtcaaacacaaggcagct
ggaaggaggcgtcacaaaacaccacgcgccacaaactctgcagccgagcaacaaacggca
actggcagcgctctcgcttcgctggatgtcgaccggtgtgatgagagcaagacggccgac
gacccggaggaaccggttgcgcaaatcgtcccacggcagttaaacactgtaaatcaggca
aatatgaaacctgtgcttgagacgatttgctactcgataaagtcgattagacgaatcaca
caaaacaaacgtccgtcgtgtctggaaaagtccaacagcctgcccgacttctcgtctcac
gtggcctccaccttcggctcgtcgtctcaagctctcctcgctttcttgtccgtcatgacc
ctaaaggaagggctagacgacatgaatatggacaagctggacgcgaacaacgtgagctgc
gccgaagccttaaaaatgatcgattctctcagaaaaatcgccagtattgacgattcccaa
gagttgaaagccagcttgtccagcttgcagcggtctgcttcaaaacagctccttcaaagt
tggaagggctttcaggatctgagcgacaaacacaagagcccaacaccaaatgattctgag
ccagaagccgcgatcgaggccgtttccggctgtcgcgttgaagaaaccgtcgtcggtgag
atcgtggacagtcttgacatacctgagaggctcaaggaagagttgaactgtctttcaaaa
gtcaaaattaacagtgacgatgaagaaccgacagaaagagcgaaaacaaaaaacaacagt
aacgccgaaatatccaaattctccacagactacggtgttagtgtcggggatgtcgctaaa
gatgacaaagatgatgttgatgtgagctcaattattaagaaattcacagacgttaaccag
ccgaaacaatccaacgcaggtggcagaactaaggacagtagagacaaagacagcttgggg
aatggttcggacaaatgtccacccgctcacccgaccaataaacacacacctgaaggaaag
cagctctgcagctcagcgttgtttgcagaagacaacgagcacaacggggtgaaatccaac
caagaccaggctcaagcgaatggagtagtcagcggctatacaatcctcgcacaggacacc
ggtgcctccgacgcagaggagcacgacggcgatcggcttcaggtgcacggtgaggcgagc
gcctctgggagcgagctccgccgctgtgaagaggaggaagggcggcgcattccaagggcc
gcgaaagatttagagcgggaggcgctttgtcagcaaagcgtatccgtttcagaagcaggt
gagcaacatagttcggaggacgagggagaagttgaatggggaagcgacgaggacaagcaa
gcaacatctgattatgatgccgaactggatgtgaggaggaaggacggaacatccagccgc
gagagtcaccacaagcctttgtcggaggaggagctgccagaggttgcatgtcaatcggcc
tgcacggggtccaactccagtgtcgacgaaagcacgtgtgacccagatgttgacgatcca
tcttcagaggaagagcagccagaggttgaaggtatgagactaaaggtcatctttgaggaa
agtgttttgggcagtgaggaagaggaggaagaacaccttgattatcttccagatcacatg
cagccaacaagaaaatacagagagtcaaaggctttgatggaagagacggaggaggacagt
gtcagctcacatgaagaaggccgcgatgccgatgaaacacacgtttgcgatacagtagaa
ggggatccaagccattttatactaaatcaggattcatatatcctaaaagacaaaagcagt
tgtataaagtctgacattttaacacagatgtatggactcaatgaagatgaagacagtggg
aatgaccacagcagctgtgagcaacacgcagagacggagcaaccaaaggatgaaggcaaa
ccacccaacacctcaagctatgaggacaaagagtcctgctcatcagaggaggaaggtgtc
cacattgacagatatacagaagacagctgtacagaatatcaaggagctcctccacacgca
aaggacaccacgcgtgaaaaggctgtagaaataccgcagcatcaaacggagggaataata
tcccaatctgtcgcggcgagggtgattcttctggaaaagcaagttgccgttgcccagaag
acaacagaaagttctgccacccgacgttcctcccagagaaaggctccactcgggcgggac
gaagaggactcgccctccgaatcgcccgcgtctcggccggctgccggcgcccaatcgccg
cctcaatcgtcactatcgttcagctacgactccagcggcgtcgtaacgtcggagcccgag
ggccaccgggtcaggtccattcgggaaatgttcctggcaaaggctgccacagatgtccaa
cacagatgtctcccgagctcgaaaacatcagaggccagagcggagacgtcagccagcggc
gggtaccagactcagacttcgagcgagccgtccagcagcgaagacgattcggcgcggaga
tccatcacgaaaggcttcgtgagaagaacaatcgaaaggctttacggcaagaaagacgcc
agacctgaccaggaggcgggtgggaggccgccatccgcgccaaaacagcaaaagcaggaa
cacttgagcgctttctctcccttccacgtatcccggtccaaagcgatgtctgagttttct
tacttcaactccactcatgcagtggagcccttgagtgacgcgacacgctgcgtcgctttt
aacgccgagttaaggcctgaagacaatgaacaatggttcctgagggaaaaggccctgatc
agaaagtccgcgtcagagccggtcgcaataaacaaaggtttcacaaactctcaaggaggg
gaaatgtgtgaggacgccgaggaggaccccccttactccctgttcagcacaaagtccgaa
ctggaggacaatcagtcgtcactgtcaaggaagtgcacctacttctctttgccccacacg
agcgactcggacgcacatctggaggagtcgagcgccgtcagcagaaccggcggcaatggc
caaagcgccgcggacacgaaggaggactcgcaggacgccgggacgcgggccgagaggggc
ggcgcgctgcccgccgtcgccgactttaagaggaaggacaacaaagtgcacccggcgacg
gagcctccgcccgacggcgaggtggtgctcgtgcagccggggaagcggcaaggcgttatg
agcagaagggtcgaggagcccgacgtgttggacatactttacaatttctgcggtcagaat
tgtcccatcctgtaa
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integrated database retrieval system
