Gasterosteus aculeatus (three-spined stickleback): 120811975
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Entry
120811975 CDS
T07457
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120811975 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811975 (sox17)
Transcription factors [BR:
gat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120811975 (sox17)
SSDB
Ortholog
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
120811975
NCBI-ProteinID:
XP_040023683
UniProt:
G3NK71
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All DBs
Position
21:13836014..13838071
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AA seq
398 aa
AA seq
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MSSPDAGYASDDQTQARCAMSAMMPGMGRCQWADPLSPLGDAKVKNEPCASGSGGQNRGK
TEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKRPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLVHGVSDHQGPSMPGDGRACAESLGYHE
HGFQVPPQQLGHYRDAQALGGPSYETYSLPTPDTSPLDAVESDLMFFPSHSQEDCHMMPA
YAYHSQAAEYQPQDPHGNHHGNPILHRHPGSTPEQPLQSANLPPSYMGCPNPLAMYYTQH
CSPGHPKRHPGGAGQLSPPPDSHHPHPADSVEQMHHSELLAEVDRSEFEQYLSSSSARVD
MAGHYGPHEAGMQGPESLISSVLSDASTAVYYCSYNNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcccgatgcgggttacgccagcgacgatcagacccaggcaaggtgcgcgatg
tcagccatgatgcctggaatgggacgctgccagtgggccgaccctctcagtcccctcggc
gacgccaaagtgaagaacgagccgtgcgcctccggctccggcggccagaatcgcggcaaa
actgagccgcggatccggcggcccatgaatgcgttcatggtctgggcgaaggatgagcgc
aagagactggcgcagcagaacccggatctgcacaacgcggagctgagcaaaatgttgggg
aaatcgtggaaagcccttcctgtgacagaaaagcgtccctttgtggaggaggccgagcgg
ctgcgcgttcagcacatgcaggaccaccccaactacaagtaccggccccggcggcggaag
caggtgaagcggattaagcggctggactctggctttctggtccacggcgtgtccgatcac
cagggcccgtccatgcccggggacggcagggcgtgtgcggagagcctgggctaccacgag
cacggcttccaggtgcccccccagcagctcggccactaccgagacgctcaggccctcggg
ggcccctcctatgagacgtatagcctccctacgcctgacacctcccctctggacgctgtc
gagtcggacctcatgttcttcccctcgcattcacaagaggactgccacatgatgcccgcc
tacgcgtaccactcccaggcggcggagtaccagccccaggacccccacggcaaccaccac
ggcaacccgatcctgcaccggcaccccggctcgactccggagcagccccttcagtccgca
aaccttcccccctcctacatgggatgccccaaccctctggccatgtattacactcagcac
tgcagccccggccaccccaagcggcaccccggcggggccggacagctctccccgcctccc
gactcccaccaccctcacccggcagacagcgtggagcagatgcaccactcggagctgctg
gccgaggtggaccgcagcgagttcgagcagtatttgagctcctcttcggcgcgcgtggac
atggccggccactacgggccgcacgaggccggcatgcaggggcccgagagcctgatatca
tcggtgctgtcggacgccagcacagctgtgtattactgtagctacaacaactcctaa
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