Gasterosteus aculeatus (three-spined stickleback): 120812002
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Entry
120812002 CDS
T07457
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gat04054
]
120812002
Pattern recognition receptors [BR:
gat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120812002
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
LRR_1
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
120812002
NCBI-ProteinID:
XP_040023716
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All DBs
Position
XXI:204355..219288
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AA seq
1019 aa
AA seq
DB search
MRLIEETGPGRRIQSSEVPTSPSAQPHQTHLDSIFMLLEENILTFVKNELKKIQKFMSSD
YPECLEKEDEEVLDEEQRRSREAFVKISVHFLRRMKQEELAERLQSRLPAAVCQRELKSN
LKKKFQCVFEGIAKAGNPTILNEIYTELYITEGGTAEVNEEHEVRQIETASRRPARPETT
IRQEDLLKASAGGEEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKDHQDIQFTFPFTFRE
LNVLREKKFSLVGLVHHFFSETRAARICKFEEFQVVFIFDGLDECRLPLDFHNNEILTDV
TEISSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVSMVTEVRGFTDPQKEEYFR
KTFRDEEQASRIISHIKTSRSLHIMCHIPVFCWITATVLEEVLKTREGGELPKTLTEMYI
HFLVVQSKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECAI
DITAASVYSGVFTQIFREERGLYQDMVFCFVHLSVQEFLAALHVHLTFFSSGVNLLSEEQ
TSSPVSKVSKDEPEPKRLYQSAVDKALQSPIGHLDLFLRFLLGLSLEPNQTLLRGLLTQT
GSRSQTNQETVQYIKVKINEDVSPEKSINLFHCLNELNDASLVEEIQWFLRSGLLSAEER
SPSQWSALVFILLSSEEDLEVFDLKKYSASEEALLRLLPVVKASNKVLLSGCNLSERSCD
ALSLVLSSQSSNLRELDLSNNHLQDSGVKLLSAGLKSPHCELETLRLSGCNLSERSCDAL
SSVLSSQSSSLRELDLSNNHLQDSGVKLLSAGLKSPHCELETLRVEPDGVRWLRPGLRKY
SCELTIDTNTVNKQLKLSDNNRKVTYVMEEDQSHPDHPDRFDSDPQLLCRTGLTGRCYWE
VEWRRGVDVSVSYRGIRRKGNSGDCEFGSNDQSWSLSCSDGGYYVLHNKTRTPITTSSSS
SSSGRVAVYVDCPAGSLSFYRVSSDTLIHLHTFSTTFTEPLYPGFWFRSPGSSVSLCPL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcatagaagagacgggaccaggtcgtaggatccagagctcagaggttcccaca
agtccgtctgcccagccacatcaaacacacctggactccatcttcatgctgctggaggag
aacatcctcacttttgtgaagaacgagctgaagaagatccagaagtttatgagttcagat
tacccagaatgcttagagaaagaggatgaggaggtgctggatgaagagcagaggaggagc
agagaggcctttgtgaagatctcagtgcacttcctgaggagaatgaagcaggaggagctg
gctgagcgtctgcagagcagacttcctgctgcagtttgtcagcgtgaactcaaatccaac
ctgaagaagaagttccagtgtgtgtttgaggggatcgctaaagcaggaaacccaaccatt
ctgaatgagatctacacagagctctacatcacagagggagggactgcagaggtcaatgaa
gaacatgaggtcagacagattgaaacagcatccaggagaccagccagaccagaaacaacc
atcagacaagaagacctcctcaaagcctcagctggaggagaggaaccaatcagaaccgtg
atgactaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggac
tgggctgaagacaaagaccaccaggacatacagttcacatttccattcaccttcagagag
ctgaatgtgctgagagagaagaagttcagcttggtgggacttgttcatcacttcttcagt
gaaaccagagcagcaagaatctgcaagtttgaagagttccaggttgtgttcatctttgac
ggtcttgatgagtgtcgacttcctctggacttccacaacaatgagatcctgactgatgtc
acagagatctcctcagtggatgtgctcctcacaaacctcatcagggggaagctgcttccc
tctgctcgcctctggatcaccacacgacctgcagcagccaatcagatccctcctgagtgt
gtcagcatggtgacagaggtcagagggttcaccgacccccagaaggaggagtacttcagg
aagacgttcagagatgaggagcaggccagcaggatcatctctcacatcaagacctcacga
agcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggag
gaggtgttgaagaccagagagggaggagagctgcccaagaccctgactgagatgtacatc
cacttcctggtggttcagtccaaagtgaagaaggtcaagtacgatggaggagctgagacg
gatccacactggagtccagagagcaggaagatgatcgagtctctgggaaaactggccttt
gatcagctgcagaaaggcaacctgatcttctatgaatccgacctgacagagtgtgccatc
gatatcacagcagcctcagtgtactcaggagtgttcactcagatcttcagagaggaaaga
ggactgtaccaggacatggtgttctgcttcgtccatctgagtgttcaggagtttctggct
gctcttcatgtccatctgaccttcttcagctctggtgtcaatctgctgtcagaagaacaa
acatcctcgccggtgtctaaagtctctaaagacgaacctgaaccaaagcgtctctaccag
agtgctgtggacaaggccttacagagtcctattggacacctggacttgttcctccgcttc
ctcctgggtctttccctggaacctaatcagactctcctacgaggtctgctgacacagaca
ggaagtcgctcacagaccaatcaggagacagtccagtacatcaaggtgaagatcaatgag
gatgtgtctccagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatgct
tctctagtggaggagatccaatggttccttagatcaggacttctctccgcagaagaacgg
tctccttctcagtggtccgctctggtcttcatcttactgtcatcagaagaagatctggag
gtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtg
gtcaaagcctccaacaaagttctactgagtggctgtaacctctcagagagaagctgtgac
gctctgtccttagttctcagctcccagtcctctaatctgagagagctggatctgagtaac
aaccacctgcaggattcaggagtgaagctgctgtctgctggattgaagagtccacactgt
gaactagagactctcagactgagtggctgtaacctctcagagagaagctgtgatgctctg
tcctcagttctcagctcccagtcctctagtctgagagagctggatctgagtaacaaccac
ctgcaggattcaggagtgaagctgctttctgctggattgaagagtccacactgtgaactg
gagactctcagggtggagcctgatggagtccgatggttgagaccaggtctgaggaagtat
tcctgtgaactcacaatcgacacaaacacagtaaacaaacaactcaaactgtctgacaac
aacaggaaggtgacatatgtgatggaggaggatcagtcacatcctgatcatccagacaga
tttgactccgatccccagctgctgtgtagaactggtctgactggtcgctgttactgggag
gtcgagtggagaagaggagttgatgtatcagtgagttacagaggaatcaggaggaaagga
aacagtggagactgtgagtttggatccaatgatcagtcctggagtctgagctgctctgat
ggaggttactatgtccttcacaataagacaagaacacccatcaccacctcctcctcctcc
tcctcctctggtagagtagcagtgtatgtggactgtcctgctggctctctgtccttctac
agagtctcctctgacacactgatccacctccacaccttcagcaccacattcactgaacct
ctttatcctgggttctggttcaggtctcctggttcctcagtgtctctgtgtcctctt
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