Gasterosteus aculeatus (three-spined stickleback): 120812003
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Entry
120812003 CDS
T07457
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gat04054
]
120812003
Pattern recognition receptors [BR:
gat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120812003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_1
LRR_4
AFG1_ATPase
DUF4329
Motif
Other DBs
NCBI-GeneID:
120812003
NCBI-ProteinID:
XP_040023718
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All DBs
Position
XXI:229164..262923
Genome browser
AA seq
1034 aa
AA seq
DB search
MDPAALAVRQANNTAVEVGGALTSSEVPTSPSAQQHQKHLDSIFMLLEENILTFVKNELK
KIQKVVSSDYPECLEKDDEEELDEEQRRSREAFVKISVHFLRRMKQEELAERLQSRLPAA
VCQRELKSNLKKKFQCVFEGIAKAGNPTLLNEIYTELYITEGGTAEVNEEHEVRQIETAS
RKPARPETTIRQEDLLKASAGGEEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKDHQDIQ
FTFPFTFRELNVLRGKKFSLVGLVHHFFSETRAAGICRFEKFQVVFIFDGLDECRLPLDF
YNNEILTDVTESASVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFT
DPQKEEYFRKKFTDGEQASRIISHIKTSRSLHIMCHIPVFSWITATVVEEVLKTREGGEL
PKTLTEMYIHFLVVQSKVKKVKYDGGPETDPHWSPKSRKMIKSLGKLAFDQLQKGNLIFY
ESDLTECGIDIRAASVYSGVFTQIFREERGLYQDKVFCFVHLSVQEFLAALHVHLTFFSS
GVNLLSEEQTTSPVSNVSRDEPEPMRLYQSAVDKALQSPNGHLDLFLRFLLGLSLETNQT
LLRGLLTQTGSRPETNQETVQYIKKKISEDVSPEKSINLFHCLNELNDVSLVEEIQQSLR
SGRLSTEELSPAQWSALVFILLSSEEDLEVFDLKKFSASEEALLRLLPVVKASNKVLLSD
CNLSERICDTLSSVLSSQSSSLRELDLSNNHLQDSGVKLLSAGLKSPHCELETLRLSVCN
LSERSCDALSSVLSSQSSSLRELDLSNNHLQDSGVKLLSAGLKSPHCELETLRVEPDGVR
WLRPGLRKYSCELTIDTNTVNTQLKLSDNNRKVTRVEEDQSYPDHPDRFDCRPQLLCRTG
LTGRCYWEVEWSGRVTVSVSYMGIGRKGNSDDCVFGLNDQSWSLICSDGGYYVYHNDTVT
PITSSSSSSSSSSGRVAVYVDCPAGSLSFYRVSSDTLIHLHTFSTTFTEPLYPGFGFWSG
SGSSRSRPLLASRE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggacccagcggcgctggcggtccgacaggcaaacaatacagccgtcgaagtggggggg
gcgctgacgagctcagaggttcccacaagtccgtctgcccagcagcatcaaaaacacctg
gactctatcttcatgctgctggaggagaacatcctcacttttgtgaagaacgagctgaag
aagatccagaaggttgtgagttcagattacccagaatgcttagagaaagatgatgaggaa
gagctggatgaagagcagaggaggagcagagaggcatttgtgaagatctcagttcacttc
ctgaggagaatgaagcaggaggagctggctgagcgtctgcagagcagacttcctgctgca
gtttgtcagcgtgaactcaaatccaacctgaagaagaagttccagtgtgtgtttgagggg
atcgctaaagcaggaaacccaacccttctgaatgagatctacacagagctctacatcaca
gaaggagggactgcagaggtcaatgaagaacatgaggtcagacagattgaaacagcatcc
agaaaaccagccagaccagaaacaaccatcagacaagaagacctcctcaaagcctcagct
ggaggagaggaaccaatcagaaccgtgatgactaagggagtggctggcattgggaaaaca
gtcttaacacagaagttcactctggactgggctgaagacaaagaccaccaggacatacag
ttcacatttccattcaccttcagagagctgaatgtgctgagagggaagaagttcagcttg
gtgggacttgttcatcacttcttcagtgaaaccagagcagcaggaatctgcaggtttgag
aagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttt
tacaacaatgagatcctgactgatgtcacagagtcggcctcagtggatgtgctcctcaca
aacctcatcagggggaagctgcttccctctgctcgcctctggatcaccacacgacctgcc
gcagccaatcagatccctcctgagtgtgttggcatggtgacagaggtcagagggttcact
gacccccagaaggaggagtacttcaggaagaagttcacagatggggagcaggccagcagg
atcatctctcacatcaagacctcacgaagcctccacatcatgtgccacatcccagtcttc
tcctggattactgctacagttgtggaggaggtgttgaagaccagagagggaggagagctg
cccaagacccttactgagatgtacatccacttcctggtggttcagtccaaagtgaagaag
gtcaagtacgatggaggacctgagacggatccacactggagtccaaagagcaggaagatg
atcaagtctctgggaaaactggcctttgatcagctgcagaaaggcaacctgatcttctat
gaatccgacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtg
ttcactcagatcttcagagaggagagaggactgtaccaggacaaggtgttctgcttcgtc
catctgagtgttcaggagtttctggctgctcttcatgtccatctgaccttcttcagctct
ggtgtcaatctgctgtcagaagaacaaacaacctccccggtgtctaacgtctctagagac
gaacctgaaccaatgcgtctctaccagagtgctgtggacaaggccttacagagtcctaat
ggacacctggacttattcctccgcttcctcctgggtctttccctggagaccaatcagact
ctcctacgaggtctgctgacacagacaggaagtcgcccagagaccaatcaggagacagtc
cagtacatcaagaagaagatcagtgaggatgtgtctccagagaaaagcatcaatctgttc
cactgtctgaatgaactgaatgatgtttctctagtggaggagatccaacagtcccttaga
tcaggacgtctctccacagaggaactgtctcctgctcagtggtcagctctggtcttcatc
ttactgtcatcagaagaagatctggaggtgtttgacctgaagaaattctctgcttcagag
gaagctcttctgagactgctgccagtggtcaaagcctccaacaaagttctactgagtgac
tgtaacctctcagagagaatctgtgacactctgtcctcagttctcagctcccagtcctct
agtctgagagagctggatctgagtaacaaccacctgcaggattcaggagtgaagctgctt
tctgctggactgaagagtccacactgtgaactggagactctcagactgagtgtctgtaac
ctctcagagagaagctgtgacgctctgtcctcagttctcagctcccagtcctctagtctg
agagagctggatctgagtaacaaccatctgcaggattcaggagtgaagctgctttctgct
ggactgaagagtccacactgtgaactggagactctcagggtggagcctgatggagtccga
tggttgagaccaggtctgaggaagtattcctgtgaactcacaatcgacacaaacacagta
aacacacaactcaaactgtctgacaacaacaggaaggtgacacgtgtggaggaggatcag
tcatatcctgatcatccagacagatttgactgcaggcctcagctgctgtgtagaactggt
ctgactggtcgctgttactgggaggtcgagtggagcggaagagttactgtatcagtgagt
tacatgggaatcgggaggaaaggaaacagtgatgactgtgtgtttggattgaatgatcag
tcctggagtctgatctgctctgatggaggttactatgtctatcacaatgacacagtaaca
cccatcacctcctcctcctcctcctcctcctcctcctctggtagagtagcagtgtatgtg
gactgtcctgctggctctctgtccttctacagagtctcctctgacacactgatccacctc
cacaccttcagcaccacattcactgaacctctttatcctgggtttgggttctggtctggt
tctggttcctcaaggagtcgccccctgctggccagtagagagtaa
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