Gasterosteus aculeatus (three-spined stickleback): 120812085
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Entry
120812085 CDS
T07457
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120812085 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120812085 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120812085 (myom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
Ig_J_second
C2-set_3
Motif
Other DBs
NCBI-GeneID:
120812085
NCBI-ProteinID:
XP_040023834
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All DBs
Position
XXI:complement(13745083..13764322)
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AA seq
1482 aa
AA seq
DB search
MSGSVPFYQKHHRHYDRSYRSKETESRLSHYQTGSRYTAAGTTSASTSASTSRSGGLKVT
SYSGLEASRLSPVPTRVKPTYLAVDKENQIIGYVVPIFRGSQEFAAGFSDTEERRVRDTA
GYMARRDLFTSGLEMERSEQISRREAMRGSAERISLNKRIHEHGEHFKRMNEDSLMHAPD
FVIKPRSHTVWEKQSVRLHCTVSGWPDPRVVWYKNNVAIDPLSNAGKYKIESRYSVHSLE
INKCDFDDTAQYRVSAMNSKGEQSVFASVVVKRFKGEVDESLPSPRRAGTEDGPVSEYGI
NFQTHIVDTFGVSFGREGETMSLGCTVIIYPALHRYQPEVQWYRDDVLLCPSKWNHMCWS
GDRATLTFTHLNKEDEGLYTLRVTTKSGYETYSAYVFVRDAEAEVERAPGAPLDVRCLDA
NKDYIIVSWKQPAVDGGDSISGYFVDRCEVGTTHWIQCNETPVKFARFPVTGLVEGRSYM
FRVRAVNANGMSRASRASEPVAAMDPADRARKRGTSAPWTGQIIVTEEEPAEGIVPGRPL
ELQVTEATKNYVVLSWNPPGEKGLEGVMYYVEKCVSGTDSWQRVNTEIPVRSPRFALFDL
AEGKSYSFRVRCCNSAGVGEPSDPTEATTVGDKLDIPSAPSKVVPTRNTDTSVVVSWEAS
REAKEMVGYYIEGSVVGSGAWEPCNNKPVNATRFICHGLTTGEKYVFRVRAVNAAGLSQF
SPESEPVEVKAAIGGGIPHASPAPPFGISVLECVRDSMVLAWKQPSFIGGADITGYFLDY
REVVDGVPEKWHEANTRAVSERAYRVSDLRENKKYQFQVRAANMAGVGIPSQPSDTFLCE
EWTIAVPGPPHDLQVREVRSDSLVLLWKPPVYQGRDPVNGFYVDIKEAGAPQEAWRGVNT
KATESAFIKITDVKEGESYVFRVRAQNYAGVGQVSAVTEPVVALTKPGTKEIVVDVDDNG
VVSLNFECGDMTADSKFVWSKNYEEITDPSRLTMETKGNKSKAAFNTPAEEDVGIYSCLV
THTDGASSSYSLSEEELKRLLVISHDHKFPVIPLKSDLAVELLEKGKVRFWLQADKMTAN
GKVDYIFNDNAVSQGDKYKMNFDKNTGVIEMIMDCLTPADEGTFTFQLQDGKATNQSSLV
LIGDVFKALQKESEFQMKEWVRKQGPHFIEYLSYEVTQECCVILKCKVGNMKKETSALWY
KDGHQIKADDSLGFTEGVLKLEIAQISKKDSGVYEVVLKDDRGKDTSTLNLTDQGFKDLM
NEVFSFIANSSTPLKITSTDEGVRLYTFVNFYNDLLQVTWHYKDSAIAFSDRVKSGVVGE
QLWLQITEPTEKDTGKYAIEFHDGKAGLRRTVELSGQAFDDAFAEFKRLQAAAIAERSRA
RVAGGLPDVVTIQEGKALNLTCNISGDPLPEVTWLKNDREITSDDHCILSIASGKFASFT
ITAVNTMDSGKYSILVKNKYGTESGDFTVSVFMPEEAGGKKK
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatcggttccgttctaccagaagcaccatcgccactatgacagaagctaccgc
agcaaggagacggagtccaggctcagccactaccagaccggcagcaggtacaccgcggcc
ggcaccacctccgccagcacctccgccagcaccagcaggagcgggggccttaaagtgact
tcgtattctgggctggaggcgagcagactgagccccgtgcccacgagagtcaagccaacg
tacttggctgtggataaagagaaccaaatcatcggctacgtagtgcctatcttcaggggc
agtcaagagttcgctgcaggattttcggacaccgaggagagaagggtgagagacacggct
ggatacatggcccgcagggatttgttcaccagcggcctggagatggagaggtcagagcag
atctccaggagggaggccatgcgcgggtcggccgagcgcatctctctgaacaaaaggatc
catgaacacggggaacatttcaagcgcatgaacgaagacagcctgatgcacgccccggac
tttgtgatcaaacctcgctcccacaccgtgtgggagaagcagagtgtgcggctgcattgc
accgtcagcggctggccggacccgcgggtcgtctggtacaagaacaatgtggccattgac
cctctttccaatgctggcaagtataagatcgagagcagatacagcgtgcactccctggag
attaacaagtgtgattttgatgacacggcgcagtatcgcgtctctgccatgaactccaag
ggggagcagtctgtatttgcctccgtcgtggtcaagaggttcaagggagaagttgatgag
tccttgccatcacccagacgtgccggtactgaagatggcccagtgtccgagtacggcatc
aacttccagactcacattgttgatacgtttggcgtgtcgtttggaagagagggcgagacc
atgagtctgggatgtacggtcatcatctacccggctctgcaccgctaccagccagaggtc
cagtggtacagagacgatgttctgctgtgtccctctaagtggaaccacatgtgctggagt
ggagaccgagccacgctgactttcacacacctcaacaaagaggacgagggcctttacacc
ctgcgcgtcaccaccaagtccggatatgaaacctactcagcctacgtctttgtcagagac
gctgaagccgaggtggagagagctccgggtgcccctctggatgtgcgctgcctggacgcc
aacaaggattacatcattgtgtcctggaagcagccggctgtcgatggcggtgactccatc
tcgggctactttgtggacagatgtgaggttggaaccacccactggatccagtgcaacgag
actcccgttaaatttgcccgtttccccgtcaccggcctggtggagggccgctcctacatg
ttccgcgtgcgcgccgtcaacgccaacggcatgagccgcgcgtcacgagcctctgagccg
gtggcggccatggacccggctgaccgcgcccgcaagagaggtacctctgctccgtggacc
ggccaaatcattgtcacagaggaggaacctgcagagggcatcgtccccggccgacctctt
gagctgcaggtgaccgaagcgaccaagaactacgtggtgctgagctggaacccacccggg
gagaaaggcctcgagggcgtcatgtactacgtggaaaagtgcgtctcgggcaccgacagc
tggcagagggtgaacacggagatcccggtcaggtctcctcgcttcgcgctgttcgacctc
gccgaggggaagtcctacagcttccgcgtccgctgctgcaactcggccggcgtcggcgag
ccgtccgaccccacggaggccaccaccgtcggcgacaagctcgacatcccgtccgccccg
agcaaagtcgtcccgacccgaaacacggacacgtcggtcgtggtgtcgtgggaggcgtcg
cgggaggccaaggagatggtgggatactacatcgaggggagcgtcgtgggcagcggcgcg
tgggagccgtgcaacaacaaaccggtgaacgccaccaggttcatctgccacggcctgacg
acgggggagaagtacgtgttcagggtgagggcggtgaacgccgcggggctcagccagttt
tccccggagtctgagccggtggaggtgaaggctgctatcgggggcggcatccctcacgcc
tccccggctcctcccttcggcatctccgtcctggagtgtgtgcgcgactccatggtgctg
gcctggaagcagccgagcttcatcggcggcgcggatatcaccggctacttcttggattac
cgcgaggtcgtcgacggcgtgccggagaagtggcacgaggccaacaccagggccgtcagt
gagagggcctacagggtgtccgacctgagggagaacaagaagtaccagttccaggtgcgg
gcggccaacatggcgggcgtcggcatcccgtcgcagcccagtgacacgttcctgtgcgag
gagtggaccatcgccgtgccagggcctcctcacgacctgcaagtaagagaggtccggagt
gactccctggtgttgctatggaaaccgcctgtgtaccagggccgcgacccggtcaacggt
ttctacgtcgacatcaaggaggcgggcgcgccgcaggaggcctggagaggagtcaacacc
aaggccacggagagcgcgttcatcaagatcacggacgtgaaggaaggagagtcatatgtg
ttcagggtgcgcgcccagaactacgccggcgttggacaagtctccgccgtgacggagccg
gtcgtggcgctcaccaaaccaggcaccaaggagatagtggtggacgtcgatgacaacggc
gtcgtctccctgaactttgagtgcggcgacatgacggccgactccaaatttgtgtggtcc
aagaattacgaggagatcacggatccgtcccgcttgactatggagaccaagggaaacaag
tccaaagccgctttcaacacccctgcggaggaggacgtaggtatctactcatgtctggtc
acccacactgatggtgcttcatccagctacagtctctctgaagaagagttgaagaggctg
ctggtgatcagtcatgaccacaagttccccgttattccgctgaagtcggacttggccgtg
gagctgctggagaagggaaaggttcgcttttggctgcaggcggacaagatgacggctaac
ggcaaagtggactacatcttcaacgataacgccgtctctcagggggacaaatacaaaatg
aactttgacaaaaacaccggcgtgatcgagatgatcatggactgtctgactccggcggac
gagggcaccttcaccttccagctgcaggatggcaaagcgaccaaccagtccagcttggtg
ctgataggcgacgtgttcaaggcgctgcagaaggaatcagagttccagatgaaagaatgg
gtcagaaagcaaggtcctcacttcatcgagtatttgagttatgaggtgacacaagagtgc
tgcgtgatcctcaagtgcaaggttggaaacatgaagaaggagacgtcggcgctgtggtac
aaagacggccaccagatcaaagcggacgacagtctcggcttcaccgagggagtcctcaag
ctggaaattgctcaaatttccaagaaggactctggtgtgtacgaagtcgttctgaaggac
gacagagggaaagacacgtccacgttgaatctgacggatcaaggtttcaaagacttgatg
aatgaagttttcagttttatcgccaattcctccaccccgctgaagatcacgagcactgat
gagggcgtccgactctacaccttcgtcaacttctacaacgatttactccaagtgacgtgg
cactacaaggattcggccatcgccttttctgaccgggtgaagagtggcgtggtgggagag
cagctgtggctgcagatcacggagcccacggagaaggacacgggcaaatacgccatcgag
ttccacgatggcaaagcgggcctgcggaggaccgttgagctgtccggtcaagcatttgac
gacgcgtttgcagaattcaagagactccaagctgctgccattgcagagagaagtcgtgct
cgagtagcaggaggccttcccgacgtggtcaccatccaggagggcaaggccctcaatctc
acctgcaacatctcgggcgaccctttgcccgaggtcacctggctgaagaacgacagggag
atcacctccgacgaccactgcatcctcagcatcgcctcgggcaagttcgccagcttcacc
atcaccgccgtgaacacgatggactccggcaagtacagcatcctggtgaagaacaagtac
ggcacggagagcggggacttcactgtaagtgtcttcatgcccgaagaggcgggcggcaag
aagaagtaa
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integrated database retrieval system
