Gasterosteus aculeatus (three-spined stickleback): 120812200
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Entry
120812200 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: granule associated Rac and RHOG effector protein 1-like
KO
K26671
granule associated Rac and RHOG effector protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120812200
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120812200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4745
Motif
Other DBs
NCBI-GeneID:
120812200
NCBI-ProteinID:
XP_040023946
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All DBs
Position
II:complement(5993935..6021673)
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AA seq
1107 aa
AA seq
DB search
MYCCSALESKMDYKRRFLLGGSKQKVQQHQQYQMPELSRTLSASLASSCSASVPMGTGVG
MPGSCHAPPSGAATTAVADIQQGISKYLDALNVFCRASAFLTDLFSSVFRNSHYSKAAMQ
LKDVQEHVMEAASRLTAAIKPEIAKMLMELSAGAANFKDQNDFSLQDVEVLGRCFLTVMQ
VHFQFLSQALQKVQPVAQSCLAEALAQAQERCANARSQSSDLGCLTELEEASRSWKGAAQ
AMARLRERGRDGCLAGIQVQQLFCSNNPTIPDHQLKELNMKIDNSLQAYKAALESLGHSE
YALKAGFHLNPKAVEAALQSCCSEAEAQQAGRMQTTSQPIQCELPTIPVQIGSHFLKGVS
FNESAAENLKLKTHTMLQLIKEALGQNGVTPRDDSPVTEVLNQVCPSSWRGACKTAVQLL
FAQAGLVVVDTAQIENKEAYAPQITLDGSKVVVQVPSTWCLKEDPATMSLLQRSLDPEKT
LGLVDVLYTAVFDINKWKERKEQALPTIQMQLQREIPDYGGRADLPPGAGSKTSSGLPKT
ISKLTSKFAKKVSSSSNSGGSYSIPSTPSRSRLSTGSSEEKTKSLGHSDGRLQSLLQMSS
LSDSSPQSQLANGLVSDDQGMNLPTDQEMQDVIDFLSGFNMGKSQQASPLVKRRNSVASA
NPAELKPPSGPPPTSQSVSHSALQPQAQTLSQPPSSVQKQQPQPQPPPQQQQQQQQQQQQ
QQQQQQQQPAPPPQQPSPQALQYYQHLLQPISQQQPPPQLPPQQTPPQVLSQQRVASKWL
VSSGQQSAPQGPPAGLSPLGPIGQWGSPGLPDLSSDLYSLGLVSTYMDSVMSEMLGQKPQ
GPRNNTWPNRDQSEGGFGVLGDTLPFDPAVGSDPEFARYVAGVSQAMQQKRQVQHIRRPS
NTRSNWPMPEEAHRTWSHPEYYSEGEAVNSSWTANQGDSASSSDETSSANGDSLFSMFSG
PDLVAAVKQRRKHSCGEPEVCTLPSPPLHHIIDDNQDSKTKTWPPKAPWQHSTHHNTMPN
PSSSLYQMNIPPSSQWSDSMQMLQSPVWSTASDCSPSAGISSGFPFTQQQQQQQQQQQQQ
QQHKPMTKGFKSFPLKHEHRPSYLHQY
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtattgttgtagtgcgctggaaagtaaaatggactacaagcgtcgctttttgctcggc
gggtccaagcagaaagtgcaacagcaccagcagtaccagatgcctgagttgagccggacc
ctgagcgcctccctggcctcctcttgctcggcctctgtgcccatgggcaccggggtgggc
atgcccggcagctgccacgcaccaccctccggcgccgccaccaccgccgtcgcagacatc
cagcaaggcatctccaagtatttggacgccctcaacgtgttctgccgggccagcgccttc
ctcacagacctgttcagcagtgtgttcaggaactctcactattccaaagcagctatgcaa
ctgaaggacgtgcaggaacacgtcatggaggcggccagcaggctgactgcagcaataaag
cctgaaatcgccaagatgctgatggagctgagcgccggggccgccaacttcaaagaccag
aacgacttcagcctgcaggatgtcgaggtgctgggtcggtgcttcctcacggtgatgcag
gtccatttccagtttctgtcgcaggctctgcagaaggtccagcccgtggcccagtcctgc
ctggccgaggctcttgcccaggcccaggagcgctgcgccaacgcccgctcccagagctct
gacctcggctgcctcactgagctggaggaagcctcccgctcatggaaaggtgcagctcag
gccatggcgaggctgagagagaggggccgggacggctgcctggcaggcatccaggttcag
cagctcttctgctccaacaaccccaccatccctgaccaccagctgaaggagctcaacatg
aagatagacaattctttacaggcatacaaagcagcactagagagcctcggccacagtgag
tacgcactgaaggccggctttcatcttaaccccaaagctgtggaggccgccttgcagagc
tgctgcagtgaggcggaggcccagcaggcgggcaggatgcagaccacctcccagcccatc
cagtgcgagctgcccaccatccctgtccagatcggctcacatttcctcaaaggagtgtcc
ttcaacgagtcagcggctgaaaacctcaaactgaaaacgcacaccatgctgcagctcatt
aaggaggcgctgggccagaacggagtgacccccagagacgattctcccgtcactgaggtc
ctcaaccaagtctgcccgtccagctggagaggagcctgcaagaccgcggtccagctgctg
tttgcccaggctggtctggttgttgttgatactgctcagattgagaacaaggaggcctat
gctccccagatcactcttgacggttccaaagtggtggtgcaggttccctctacatggtgt
ctgaaggaggacccagccactatgtccttgctccagcggagcttagatccggagaagaca
ctcggcctggtggacgtgctgtacactgcagtgtttgacatcaacaagtggaaggagaga
aaagaacaagccctgcccacgattcagatgcagctgcagcgggaaatccctgattatggc
ggccgggccgacctgcctccaggcgccggctcaaagacctccagcggtttgcccaaaaca
atatccaagctgacttccaagttcgcaaagaaggtctcatccagctccaatagcgggggc
agctactccatcccgagcaccccgtctcgcagcaggctgtcaaccggtagctccgaggag
aagaccaagagcctgggccacagtgacgggaggctacagagcctcctgcagatgagcagc
ctgtccgactcctccccgcaaagccagctggccaacggtttagtgtccgacgaccagggg
atgaacttgccaactgaccaggagatgcaggacgtcatcgactttctctcaggattcaac
atggggaaatcccagcaggcctcgcctctggtcaaaaggaggaactctgtggcgtctgcg
aaccccgctgagctgaagccgccgagtgggccgccgccaacttcccaatctgtctcacac
agcgccctgcagccccaagctcagaccctgtcccagcctccgtcatcagtgcagaaacag
cagcctcaaccacagccacctccgcagcagcagcagcagcaacaacaacaacaacaacaa
cagcagcagcagcagcagcagcagcctgctcctccacctcaacagccctccccccaggcc
ctgcagtactaccagcacctcctgcagcccatcagtcagcagcagcctcctcctcaactt
cctcctcagcagaccccaccgcaggtcctgtcacagcaaagagtggcaagcaagtggctt
gtcagctccgggcaacagtccgcaccgcaaggtcccccagcagggctgtcccccctgggc
ccaatcggtcagtggggctctcctggactgccggatctgagctcagatctgtacagtctg
ggcctggtcagcacctacatggacagtgtcatgtcagagatgctgggtcagaagccacag
gggccccgtaacaacacttggcccaacagggaccagagtgaaggaggttttggagtcctg
ggagacacgctgccctttgaccctgcagtcggctccgacccggagtttgcgcgctacgtc
gccggcgtcagccaggccatgcagcagaaacggcaggtgcagcacatccgtcgccctagc
aacacgcgcagcaactggccaatgcctgaagaagcacacaggacctggtcccacccagag
tactacagtgagggggaggccgtgaacagcagctggacagccaatcagggggactcggcc
agctccagcgatgagacgtcttcagccaacggtgacagcctgttctccatgttttcgggt
ccggatcttgtagcagcggttaaacaaaggagaaaacacagctgtggcgagccggaggtg
tgcaccctgccctcaccaccactccatcacatcatcgatgataaccaggacagcaagact
aaaacctggcctcccaaagcgccgtggcagcactccacccaccacaacaccatgcccaat
cccagctcttccttgtaccagatgaacatccctccatcctctcagtggagcgactccatg
cagatgctgcagtctcccgtgtggtccactgccagcgactgctccccctctgccggcatc
tcctctggttttcctttcacccagcagcagcaacaacaacaacaacaacagcagcagcag
cagcaacacaaacccatgaccaagggctttaaatcgttcccccttaaacatgagcacagg
ccctcctaccttcaccagtactga
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