Gasterosteus aculeatus (three-spined stickleback): 120812429
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Entry
120812429 CDS
T07457
Name
(RefSeq) sorting nexin-1-like isoform X1
KO
K17917
sorting nexin-1/2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120812429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120812429
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120812429
Membrane trafficking [BR:
gat04131
]
Endocytosis
Macropinocytosis
Sorting nexins
120812429
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120812429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
GvpO
Motif
Other DBs
NCBI-GeneID:
120812429
NCBI-ProteinID:
XP_040024296
LinkDB
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Position
Y:complement(520151..565054)
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AA seq
679 aa
AA seq
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MATSSERSPPPFPDSEDHDVLDSEEVGGRDSDEDDVGDELFTSAVNSPLTEHGSTPSPAS
QPSDVSMKPLRDILDDPLIEPLSSQTENKPTTEDASEPSDDFGNLTSNITDSPGDTAADA
TEIPLDKHADDFVDIFGVEAEAPRGKVVVADVTIETAAHKREAANDVTDPPGDRKTGSND
EEQEVKETSTDSIIDLSDDLPASDSQQPPPARDRFIDPLVNLLSDSPAASDAKIPSRATV
DLFKDEGSDLFADPRQHKSAHQPQKSLLDEPDEDLFCESLWAASKKLVSKEPRGKPDATK
AASNVSNTGGPLQEAADLFSQEAVTAVPGIKNASTVNSKTNGVHSEEEKEIFAEATVELS
LDSPRDERRNDVSARPSASASALSAAASLAKSQSASLEELDEEEQEDKFEISISVKDPEK
IGDGMNAYMAYKVTTQTQLAMFRYKTFTARRRFSDFLGLYEKLSEKHGPNGFIVPPPPEK
SILGMTKVKVGKEDSSSADFVARRRAALERYLQRVVNHPSLLQDPDVREFLEREELPRAV
GTQALSGAGFLKMINKATDAVSKMTIKMNESDVWFEEKLQEVESADQQFRKLHTLVESLV
VHRKELSLNTASFAKSTAMLGSAEDNTALSRALSQLAEVEDKMEQLHQEQAANDTFSFAE
LIADYVRLLGAVRGSLITG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcggagcgcagtcctcctccgttccccgactccgaggaccacgatgtg
ctggactcagaggaggtgggaggccgcgacagcgacgaggacgacgtcggggacgagctc
ttcacgagcgcggttaactctccactgactgaacatggcagcacgccatcacctgccagt
caacccagcgacgtttcgatgaagcctctccgtgacatcttggatgatcccttaatcgag
cccctcagcagccaaacggaaaacaaaccgacgaccgaagatgcaagcgagccctcggat
gactttggcaaccttacgagcaacattactgattctcccggagacacggccgcggacgca
actgagatccctttagacaaacacgcagatgattttgttgacatatttggagttgaagct
gaagccccgcgagggaaagtagtggtggcggacgttactattgaaacagcagcacataag
agggaagcggccaatgatgtcaccgatccacccggagacaggaaaacaggaagcaacgat
gaggaacaggaagtaaaagaaacgtccacggattcaattattgacctcagcgatgatttg
ccagccagtgactcacaacagccgccacctgctagagacagattcattgacccactggtg
aaccttctaagtgattcgccagccgcttctgatgccaaaatccccagccgggccacagtc
gatctgttcaaagacgagggaagcgaccttttcgcggatcctcgtcagcataaatctgcc
catcagccccagaaaagcctccttgacgaacctgacgaggatctgttctgcgagtcgctc
tgggccgcctcgaagaaactcgtcagcaaggagccgaggggaaagccagacgcaaccaaa
gccgccagtaacgttagcaacacaggcggcccgctacaggaggccgctgatctcttctct
caggaagccgtcactgcagtgcctggcatcaagaacgccagcacggtcaactccaagact
aacggggtccattctgaggaggaaaaggaaatatttgccgaagctaccgtggagctttct
ctggacagtccgcgggacgagagacggaatgacgtgtcggccagaccgtctgcgtccgcc
tccgccttgtcagcagctgccagcctggccaagtcccagtctgcttccctggaagagttg
gatgaagaagagcaggaagacaaatttgagatctccatctctgtcaaagaccctgaaaaa
ataggtgatgggatgaacgcctacatggcctacaaagtaaccacacagacccagctggcc
atgttccgctacaagacctttacagcgaggcgacgcttcagcgacttcctcggcctctac
gagaagctgtctgaaaagcacggacccaatggcttcatcgtgcctccgccccccgagaag
agcattctgggtatgacgaaggtgaaggtgggaaaggaagattcctcatctgcagacttt
gtggcgagaagaagagctgctctggagagatatctccagagggtcgtgaatcatccgtct
cttctccaagatccggatgttagagagtttctggagagagaggaacttcccagagcagtg
ggcacacaggctctgagcggcgccggcttcctgaagatgatcaacaaagcaacagacgcc
gtcagcaaaatgaccatcaagatgaacgagtcggacgtgtggtttgaagagaagctgcag
gaggtggagtctgcagaccagcagttccggaagcttcacacactggtcgagtctctggtc
gttcacaggaaagagttgtcgttgaacacagccagttttgccaaaagcacggccatgctg
ggcagcgcagaggacaacaccgccctgtcccgagctctctcccagctggcagaggtggag
gacaagatggagcagttacaccaggagcaggctgctaacgacactttcagcttcgccgaa
ctcatcgcggattacgtccgccttcttggagccgtgagggggtcgttgatcaccggatga
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