Gasterosteus aculeatus (three-spined stickleback): 120812463
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Entry
120812463 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120812463
Transcription factors [BR:
gat03000
]
Eukaryotic type
Other basic domains
RF-X
120812463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
120812463
NCBI-ProteinID:
XP_040024381
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All DBs
Position
Y:complement(673431..690691)
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AA seq
1481 aa
AA seq
DB search
MAHDQQQPGPKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDGILQDVETF
TDIEKLYLYLKLPSGPSNGNDKRTENERGSSTPGLCDQSSMSSSRTQQMYAFNWIRNHLE
EHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYS
GLRKKAFVHMPSLPNLDLQKSGDGCELMEPMGQSPSAEDEMRSAACGLVCEWAQKVLSRQ
FDHVEDLAHFLLNSHYIGTKSMAALTVMTGTPTGMRTPTPASAFVPTAEANSFQAQGKTL
PSPSVDAKQQLQRKIQKKQQEQKLHSPLPSEAQVKRTEASTPGPTIPCGSPALLSSQPTI
GIVVAAVPSPVTVQRGRQLMTSPSPVGTSEGKVLPVNFQVVTQSVKPSPKHPQNISASPV
SDRLARHGTRYAQILPKPSATSAITLRSPPTLLITNNPXKTVMPTPHVSSVNVVKMTAIA
LAPSSSGGTSVRPASAGVNTIAALDDSQHPHGVPSFAPQSPAIRTGPLVSTHILSSDIKV
VSEAANDNTFAAGAKEGRMAKFRAASEPSFLIKCSPGPDRGLRVKSDPTPPPTSVAVAGT
LDSNSINCHGSTLYLTVDNQNSIGNTSSNGSSALTPTSKDPCLDAKSPRKRTGPSGEAHV
IPVKRVFISQQPLAFIDNPKPAVSAALKRIPRPGTPARPESAPCKATVKHTSAGPSQILA
LSDSLITHNEGAQPVVKPQALLMKREDHSLAADTRAAGNNAPDQALLRQITRDSLTIPAN
SGALKASVMGDLKSTIWEEGQLNKLQKQAFAQQIPAEPKQAPSDQPSIIAQPPEASGQLS
LTQEMVDFAGSQPNMDYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFGSCVDVSIQGQSA
SSQGSILNSHQAGPTFFHSAHSSTTPVQTPTPTPTPTPTSEITLGHSMARESPCSRMAPI
TPVDGAMGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHDASIVSSSPVKP
MQRPMATHPDKAKLEWINNRYNSNSAGLLPNHSIGILPSYQDLVDDQFRKPHAFAIPGHL
FQAQSRQDAAHFGRLTPISPVQQQQQQQQQQQQQLVTSVNTPTKQESFAVPAPLDNKGST
SSASSTFRCRSVSPAVCQRNPSGNTNPLTYTNTTNTTTRAVVSPFNSPITSEVLSIPSNS
QTVSSVHSMVQRSQSVPLNIMMQSEMLPVQGQSNTAKITNVLLSKMETDGSDSIRGLGIN
NLPSNYTARLNLTQILETTPGYAGGTADQTLLPVCSSPAAFELQQHGYLTTGSGEQGSFS
AGEGQAQAGPGDHHQQQQQQLSESPAQTQTQLLLQSTQQPEAEDEQQQLDFNNTVKDLLG
DDGLNPSSQLVGQVASELNAVASDFSNDIRLTSDLSSSITDLNTLDTNLLFDPNQQQEQY
EDSTLEELKNDPLFQQICSDTVNSFDWLESKDQPTTVEMLG
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgatcaacaacaaccgggtccgaagcctgcctcggggttaggctctctccca
gccctggttccggggctccaggggcccgaggccaacgcgctgcagttcaaaataaagaac
tcgatctgcaaatctgtacaatcaaaagtggacggcatattgcaagatgttgagacgttt
acagacatcgaaaaactctacctctacctgaagttgccttctggtcccagtaatgggaat
gataaaaggactgagaatgagagggggtcctccactcctggattatgtgatcagagttcc
atgtcgtcaagccgcacgcaacagatgtatgcattcaactggatacgcaatcacctagaa
gagcatccagagacttccctcccgaagcaagaggtgtatgatgaatacaagagctattgt
gacaatctcggctacaatcccctgagtgcagccgacttcggaaagatcatgaagaatgtt
tttcctaacatgaaggcacgtcgactgggcatgaggggcaaatccaaatactgttatagc
gggttaaggaagaaagctttcgttcacatgccgtccttacccaacctggatctgcagaag
tctggtgatgggtgcgagctgatggagccgatgggccagtccccgagtgctgaagatgaa
atgagatctgccgcctgcggactggtgtgcgagtgggcccaaaaggtcctgagtcgtcag
tttgaccacgtggaggacctggcccacttcctgctcaatagccactacattggtactaag
tccatggctgcgctcactgttatgaccggaacacccacaggaatgaggacgccaactcca
gcgtctgcgtttgtgccaacagctgaggcgaactctttccaggcccaggggaagaccctg
ccttctccctctgttgacgcgaagcagcaactgcagcgcaagatccagaagaagcagcag
gagcagaagctccactcgcccctgcccagtgaggcccaggtcaagagaacggaggccagc
actcccggccccacgatcccctgtggcagccccgctctgctctcctctcagcccaccata
ggcatcgtagtagcagctgtgcccagcccagtcacggtgcagcgaggccggcagttgatg
acctcacccagcccggtggggacttccgaagggaaagtgttgcccgtgaacttccaagtg
gtaactcagtccgtgaaaccgtcccctaaacatcctcagaatatctccgccagtcctgtg
agtgaccggctggcacgacacggtacgcgctacgcacaaattctgcccaagccctctgcc
accagtgccatcacgctgcgctcgccccccaccctgctcatcaccaacaaccccnataaa
actgtgatgccgactccccacgtcagctcggttaacgtggtgaagatgacggccatcgct
ctggctcccagcagcagcggcggcacgagcgtgcgtcccgcctcggcgggtgtcaatacc
atagctgctctggacgactctcagcacccgcacggcgtaccctcatttgcccctcagtct
cctgcaatccgaaccggccccctagtctccacccacatcctgtcctccgacatcaaagtg
gtgtctgaagccgcaaatgacaatacctttgctgccggggccaaagagggaagaatggcc
aagttccgggcggccagcgagccaagcttcctgattaagtgttctcccggacccgataga
gggttaagggtaaaaagtgaccctacgccccctcccacctcggtagctgtagctggaact
ctagacagcaatagcattaactgccatggcagcactttgtacttgactgttgataatcag
aactccattggaaacacgtcatccaatggctcctctgctcttaccccgacatcgaaagat
ccctgcctggatgccaagagcccaagaaagcgcacaggccccagtggggaggcccacgtt
attcctgtgaagagggtgttcatttcccagcagccactggcttttatcgataatcccaaa
cctgcagtcagtgctgctctgaagaggatccccagaccgggaaccccagccagacccgag
agtgctccctgcaaagcgactgtgaaacacacctctgcagggccctcgcagatccttgcc
ctctctgactcgcttatcacacacaacgagggcgcccagcctgttgtcaaaccccaggcc
ctgctgatgaaacgcgaggatcattctctcgccgctgatacaagagcagctggaaacaac
gcgccagatcaggcgttgctaaggcagatcaccagggactctctcactataccagccaac
tcaggagcactcaaagcctctgtgatgggggacttaaagagcacaatatgggaggaggga
cagctcaacaagcttcagaagcaagcttttgcgcagcagataccagcagaacccaaacaa
gccccttctgaccaaccttccattatagctcaaccccccgaggcctcaggccagctgagc
ctcacgcaggagatggttgactttgccggttctcagcccaacatggactacttccctttc
aacgacgacgacatgacccaggacagcatcgtggaggagctggtgcaaatggaggagcag
atgaaactgaagggtctgttcgggagctgtgtggatgtgtccatccaaggccagtcagcc
agcagtcaaggctctatcctaaattctcaccaggccggccctactttcttccactctgcc
cacagcagcaccactcctgtccaaactccgactcccacgccgacacccactcccacctct
gaaataacgcttggtcacagcatggcaagagagagcccctgttcccgcatggctcccatc
acccctgttgacggagccatgggtcgccacacccccatcagcacgccgctgtccaactgc
agcagcagcgttcccccgagcccggtggagtgcaggaaccccttcgcgttcacgccgatc
aactcgagcatcacagggtatcatgatgccagtattgtctccagcagccccgttaagccc
atgcaaaggccgatggcgacgcaccctgacaaggccaagctggagtggatcaacaaccgc
tacaacagcaactctgcaggtcttttgccaaaccatagcattggcattctgcccagctac
caagacctggtagatgaccagtttcgtaagccacatgcctttgcgatcccaggccattta
tttcaagctcagtcgagacaggatgctgctcactttggccgtttgacccccatatccccg
gtgcagcagcagcagcaacaacaacaacaacaacagcaacagctggtaacgagtgttaac
acacccacaaaacaggagagttttgctgtgcctgcaccgttagacaacaagggatcaacc
tcatctgcgtccagcactttccgttgccgcagtgtgagtcctgcagtgtgccaaaggaac
cccagtggaaacaccaaccctctaacctacaccaataccaccaacaccaccacccgagct
gtggtttccccctttaactcccccatcacgtccgaggtgctcagcatcccgtccaacagt
cagactgtcagctctgtgcacagcatggttcagcgtagtcaatctgtgcccctgaacatc
atgatgcagagtgagatgctgcccgtgcagggtcagagcaacaccgccaaaatcaccaat
gtccttctgagcaagatggagactgatggcagtgattctatccgaggcctgggcataaac
aacctcccctccaactacacggcccgtttgaacctcacacagatcctggagaccacgcct
ggctacgctggaggaaccgctgaccagactctgctgccggtctgctccagccctgctgcc
tttgagctccagcagcatggctacctgaccacaggcagtggagaacaggggagtttctcc
gctggggagggccaagcacaagcaggtcctggtgaccaccatcagcagcagcagcagcag
ctcagtgagagtcccgcgcaaacgcaaacgcagctcctccttcagagcacacagcagcca
gaggcagaggacgagcaacagcagctggatttcaacaacactgtcaaggacctgctgggg
gacgatggcctcaatcccagttcccagttggtgggtcaggtagcttcagagctcaacgct
gtggcatctgacttttcaaacgacatcagactgacctcagatctgtccagtagcatcact
gaccttaacacgttggacaccaacctgctgtttgatcccaatcaacagcaggaacaatac
gaagactccacactggaagagctgaagaacgacccgctgtttcagcaaatatgcagtgat
actgtgaactcctttgactggctagaaagcaaagaccagcctactacagtagagatgctg
ggctaa
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