Gasterosteus aculeatus (three-spined stickleback): 120812474
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Entry
120812474 CDS
T07457
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120812474
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
ig
Ig_3
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Ig_6
Sp38
Endotoxin_C
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
120812474
NCBI-ProteinID:
XP_040024404
UniProt:
A0AAQ4S8W0
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All DBs
Position
Y:11431890..11481079
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AA seq
646 aa
AA seq
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MLNKMTSSQQQQMMQGPRWNRALSDPFFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPVESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLAVIQPGSF
RGLIYLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHKGRYIGELDQNHFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVNWITPNGSIMTHGDYKIRISVLTDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIESPHNEAFTIAVQQKVGP
TPPAGTWESVLPTSTTTTTVRTPLYTRTTEKTYTIPVTDRDGSLNGLDEVMKTTKIIIGC
FVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGQGMEGHLTLPPLE
HEHLNHYNAYKTAYNHASTINSIHSPAHEPLLIRASSKDNVQETQI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcaaggtcctaggtggaac
cgggccttgtctgaccctttttttgtgctgcttctggccctccagctgctggtggtggca
gggctggtacgcgctcagacatgcccctctgtctgctcctgtagtaatcagttcagcaaa
gtcatctgcacccggcgaggcctgcgagatgtccctgatggcatctctaccaacacccga
tacctaaatctgcaagaaaacctaattcaggtcataaaggtggacagcttcaagcacttg
agacatctggagatcctacaactgagcaaaaaccacatacgcaaaattgagttgggcgcc
tttaatggactggccagcctcaataccttggagctttttgataaccgcctcaccactatc
cccaacggggcctttgagtacctgtccaaactaaaggagctttggctgaggaataacccc
gtagagagcatcccctcctatgctttcaacagagtgccctcattacgccggttggacctc
ggggagctcaaacgtctctcctacatatctgagggtgcctttgaagggctgagcaatcta
cgctacctaaatctgggaatgtgcaatctgaaggaaattcccaaccttatccccctagtg
aagctggatgaactggagatgtcagggaaccagctcgctgttatccaacctggctctttt
agggggctcatctatttgcagaagctatggatgatgcatgcccagatccagacaatagaa
aggaactcttttgatgacctgcagtcactagtggagctcaatctagcccataacaacctt
actcttttgccccacgatctcttcactcctttacatcatctagagagggtacacttgcac
cacaacccgtggaattgtaactgtgacatcctctggctcagctggtggctgaaggagatg
gtcccagctaacaccagctgctgtgcccgttgcagctcaccaacccaccacaaaggacga
tacattggcgagctggaccagaaccactttcactgttacgctcctgttattgtggagcct
ccagcagatctaaatgtgacggaaggaagcgctgccgagttgaaatgcagagccagctct
ttgacgtcggtaaactggattacacccaatggttccatcatgacacacggagattacaaa
atcagaatatctgtgcttaccgatggcaccctgaactttaccaatgttaccatgcaagac
accggaacgtacacgtgtatggtcagtaattctgcaggaaacacaacagcgtctgccact
ctcaatgtgtcctctactgagaacagcagcttcagctacttcaccacggtgacggtggag
acaatagaatcaccacacaatgaagccttcaccattgctgtgcagcagaaggtgggcccc
acccctcctgctggtacatgggagtctgttttgccaacctccacaacaaccacaacagtc
cggactccgctctacacccgcaccacagagaagacctacaccatcccagtcacagatcgc
gatggttcactgaatggtttggatgaggtcatgaagaccaccaagatcatcatcggctgc
tttgttgcaatcacactcatggcagcagtcatgttgatcatcttctacaagatgcgtaaa
cagcaccaccagcagaaccaccacgcacccacacgcaccattgagatcatcaatgtggat
gaggactgtgtaactggaggccagggcatggaagggcacctcaccctgcctcctcttgag
catgagcacctcaaccactacaacgcctacaagactgcgtacaatcatgcctccactatc
aactctatacacagtccagcccacgaacctttgttaattcgggccagctcaaaagacaac
gtacaagagacccagatctaa
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