Gasterosteus aculeatus (three-spined stickleback): 120812487
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Entry
120812487 CDS
T07457
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120812487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120812487
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120812487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
TarH
Motif
Other DBs
NCBI-GeneID:
120812487
NCBI-ProteinID:
XP_040024466
UniProt:
A0AAQ4QYU2
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Position
Y:complement(6561210..6585314)
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AA seq
822 aa
AA seq
DB search
MDAEGFGELLLQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSQVPAAGRSALDS
VEVAYGRQIYVFNEKIVNGHIQPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVLAK
DTLKSRTSVEMQMAFVHQALGFLENSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEIECHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKTWFQEYMNSP
TRRLSPTLENKLRLHYRRVLRNSADPYKRAVYCLIGKCDISDNHGEVADKTEDYLWLKLN
QVCFDDDGSSSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELQLLLKSSGQSAQLLSQEPGDPPMVRRLNFICLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIINKVALEAENKGLFEEAVKLFELAKNPDKVLELMNRLLSPVVAQVSAPQSN
KERLKNTAVAIAERYRSQGIAGDKSINSTFYLLLDLTTFFDEYHAGHLDRAYDVMERLKL
LPLSQDSVEERVAAFRNFSDEVRHNLSEVLLVTMNILLTQHKRLKAAPAGTPGRPLRTAE
DRDMQLRSQARALITFAAISSLTGIFQSIKPHHGTSRMMFPT
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagggtttcggggagcttctgctgcaggcagagcagctagctgctgagaca
gaagcagtatcggagctaccgcatgttgagaggaacctccaggagatccagcaggcagga
gagcggcttcgatcccgcaccctgacccgcacctcgcaagatgctgccgatgtgaaagcg
tcaatcctcctcggttccagaggtttagacatcttccacatctctcaaaggttggaaagt
cttagtgcagccaccacctttgagcccctggaaccggtaaaagacactgacatacagggc
ttcctgaagaacgagcgggacaacgccttgctgtcggccatcgaggagtctcgacgcagg
acgttcctgttggctgaggagtaccaccgggagtccatgctggtgcagtgggagcaggtg
aagcagagagtgctgcacacgctactgggagcaggagaggacgcgctggacttcagtcaa
gatgtggagccgagctttgtgagtcaagtaccagctgcaggaagaagcgctctggacagc
gtggaggtcgcctacggacggcagatttacgttttcaatgagaagattgtgaatggtcac
attcagccgaatctgggagacttgtgtgcttcagtcgcagagagcctggacgacaagaat
gtatcagacatgtggctgatggtgaagcagatgacggatgtgttgctcgttctggccaaa
gacactctgaaaagtcgcacctctgttgaaatgcagatggcttttgtacaccaggcgctc
ggcttcctagagaacagttataaaaactacaccttggtgacggtgtttgggaacctccat
caggcccaactagggggagtgccaggaacataccaactagtccgcagcttcctcaacatc
aaactaccggggcctctgcctggcatgcaggatggtgagatagagtgccacccagtgtgg
gcggtgatctactactgtctgcgctgtggggacctgaacgcagccatgcaggtcgtgaac
cgagtgcagcatcagttgggagactttaagacctggtttcaggagtacatgaacagccca
accagacgcctttctccaactttagagaacaagctccgcctccactaccgcagggtgctg
aggaacagcgccgacccttacaagagagccgtctactgcctgatcgggaagtgtgacatc
agcgataaccacggagaggtggcagacaagactgaagactacctctggcttaagttgaac
caggtgtgttttgatgacgacggcagcagctctcctcaggaccgactgaccctgccgcag
ctgcagaaacagctgctggaggactacggagagtcccacttctcagcgagccagcagccc
ttcctgtatttccaggtgctgttcctgacggctcagttcgaggcggcggtggcgttcttg
tttcgcgtggagcgactccggagccacgcggtgcacgtggcgttggtcctgtacgagctg
cagctgttgctgaagtcgtcgggacaaagcgcccagctgttgagccaggagcctggcgac
ccccccatggtacgccgcctcaacttcatctgcctgctcatgctctacactcgcaagttt
gagtccaccgatccacgggaagccctgcagtacttctacttcctacgcaacgagaaagac
agccagggagaaaacatgttcatgcgttgtgtcagtgaactcgtgattgagagtcgtgag
tttgacatgctgttggggagactagagaaggacggcagtaggaagcccggagtcatagat
aagttcgccggggacaccagagccatcatcaataaagtggctctggaggccgagaacaag
ggcttgtttgaggaggcggtcaaactcttcgagctggccaagaacccagataaggtgttg
gagctgatgaacaggctgctgagtccagtcgttgctcaggtcagcgcccctcagtccaac
aaggagaggctaaagaacaccgcagtggccatcgccgagaggtatcgttctcagggcatc
gcaggagacaagtccatcaatagtactttctacctgctgctggacctgaccaccttcttt
gacgagtaccacgcaggtcacttggacagagcctacgacgtgatggagcgtctgaagctc
cttcctctcagtcaggacagcgtggaggagagagtggctgcttttaggaacttcagtgac
gaggtgcgccacaacctgtccgaagtgctgttggtcaccatgaacatcctgctcactcaa
cacaagcgcctgaaggcggcgccagcgggcacgccgggacgacccctaaggaccgcagag
gacagggacatgcaactccgcagtcaggccagagccttgatcacctttgctgcaatttca
tctttaaccgggattttccaaagtataaagcctcatcacggcacgtctcggatgatgttt
cccacctaa
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