Gasterosteus aculeatus (three-spined stickleback): 120812503
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Entry
120812503 CDS
T07457
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120812503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120812503
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120812503
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120812503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
120812503
NCBI-ProteinID:
XP_040024513
UniProt:
A0AAQ4PK14
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Position
Y:complement(5687854..5694091)
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AA seq
531 aa
AA seq
DB search
MFGARKKFVEFVEVVDNDFADESMYYSQSSMFPHRSDKDSSNVFLQMLSSPSPSSSSGQL
SQLGASLYGPQSALGFSVRGIGNSTPQLNRNLTQGTQLPSHITPTTGVPTMSLHTPPSPS
RGTLPMNTRNMLNHSQVGQGIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTI
NSMSGFGMNRNQGFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGTGNPTPV
LNPLAGRAPYVGMVTKPSTELTQDFSIHNEDFPALPGLNYKDPTLNNDDSKTNLNSTSKS
TSNADGPKFPGDKTTTAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAET
DPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRD
KLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTL
KTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagtttgtcgaggtagtcgataatgacttcgct
gacgaaagcatgtactacagccagtcgtcgatgttcccacatcggtcggacaaagattct
tcaaatgttttccttcagatgctgtcgtctccctcgccgtcgtcgtcgtcgggtcagctg
tcgcagctcggtgcaagtttgtacggtccgcaaagtgcacttggcttctcggtgaggggc
atagggaacagcacgccgcagttaaatcgaaatctaacacaaggcacgcagctaccaagt
catatcacccccacgaccggggtccccaccatgtccctccacacccctccgtcaccaagc
agggggacgttgccgatgaacacgaggaacatgttgaaccactctcaggtcggtcaaggc
attgggatgagtggcaggaccaatagcatgggcagctcggggctcgggagtcccaaccgc
agctcgcccagtatcatctgcatgcccaaacagcagccggcacgccagccgttcaccata
aacagcatgtcaggctttggtatgaatcgcaatcaggggtttgggatgaacaactcgtta
tcaagcaacatcttcaatggcacagatgggagtgaaaatgtaacgggactggatctgtca
gacttccctgcgttagcagacaggagtcggagagaagggactggaaacccaacaccggtg
ctcaacccactggctggacgggctccttatgttggcatggtgacaaagccgtcgacggaa
ctaacacaggatttctccatccataacgaggacttccctgcgctgcccgggctgaactac
aaggaccccacgttgaacaacgacgacagcaaaaccaacttgaactccacaagcaagagc
acatccaatgcagatgggcccaagttccccggagacaagacgaccacagcacagaacaac
aaccagaagaaagggatccaggtgttgcccgatggtcgggtgacgaacatcccctcagga
atggtgacggaccaattcggcatgattggcctgctgacgtttatccgggcagcagagacc
gatccggggatggtacatctggcgctcggaagtgacctcacaacgctgggactcaactta
aactcaccggaaaacctgtaccccaagtttgcctctccttgggcctcatcgccatgtcgg
cctcaagacatcgacttccacgttccgtctgaatacttaaccaatatccacataagggac
aagttggcagcaattaaactggcacgatacggtgaagacctgttgttctacctgtactac
atgaatgggggagacctgctacagcttctggcggcagtagagcttttcaaccgggactgg
aggtatcataaagaagagcgggtttggataacgagggcgcccggcatggagcccacgctg
aagaccaacacctacgagcggggaacctactacttttttgattgtctcaactggaggaaa
gtagccaaggaattccacctggagtacgataagcttgaagagaggcctcacgtgccaacg
acattcaactacaacccagcgcagcaggccttctaa
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