Gasterosteus aculeatus (three-spined stickleback): 120812572
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Entry
120812572 CDS
T07457
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04150
mTOR signaling pathway
gat04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120812572 (lrp5)
04150 mTOR signaling pathway
120812572 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120812572 (lrp5)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120812572 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
Vgb_lyase
DUF5050
SGL
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
120812572
NCBI-ProteinID:
XP_040024614
UniProt:
A0AAQ4PAY1
LinkDB
All DBs
Position
Y:27550..63534
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AA seq
1652 aa
AA seq
DB search
MDLTRSGREMGARLRLALLWGCLLLSAVDGSPLLLFANRRDVRLVDAEGARAESAVVVSD
LEDAAAVDFLYSEGLIFWTDVSEEAIKQTRWNQSSNSLKEALGTRQSVVVSGLDSPDGLA
CDWLGRKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAIALNPAQSYMYWTDWGEEP
RIERAGMDGSNRKVIVVVDIYWPNGLTIDLLEQKLYWADAKLSFIHRANLDGSARETVVE
GTLTHPFALTLSEETLYWTDWQTRSIHACNKHSGDKTREILSGIYSPMDIQVLESYRQPY
IQTPCSDNNGGCSHLCLLSPVQPFYSCACPTGVQLKPDGRTCKPGAEQVLLLARRTDLRR
ISLDLPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSHIDGSDAVMLVTTE
INHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISDNLDEPRAIVLDPVNGYMY
WTDWGRHPKIERAHLDGTERLVLINSSLGWPNGLAIDYAAGKLYWGDAKTDKIEVIDVDG
GNRQTLLEDKLPHIFGFTLLGDHIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKAT
RVTETHGTNGCAGGNGGCSHLCFWCRQAVSCACPMGMELLSDLQTCVVPEAFLLFTNRDN
IRSISLGTNSNDVPIPLNGVKEASALDFDVSERRIYWTDIQAKVGGGIHTISRAYMNGSS
VEHVIEFGLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDN
PRSLALDPANGYMYWTEWGGRPRIARAYMDGSTVTTLVDKVGRANGLTIDYLDHRLYWTD
LDTCMIESTNMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVV
LQGQLELMLDILVFHSSRQEGTNECSHNNGNCAHLCLATPAGAQCRCASHYTLNPDGRNC
SSPSSFLLFSQKASISRMVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRR
AKDNGAMSSMIVSSSVQPVDNQLHDLSLDPYSRHIYWTCETTNSINVQRMDGVMVGVVLR
DDADKPRAIVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKL
GKLFWVDADLKRIESSDLTGANRIVLQDSNILQPTGLTVLGDHLYWIDRQQQMIERVDKL
SGDGRTRIQGRISYLTSIHAVEEMDPQEFASNPCSRDNGGCSHICIAKGDGTPRCSCPMH
LVLLQDLLHCGEPPTCSTEQFTCSTGEIDCIPMAWRCDGIPECADSSDEENCPVCSAYQF
QCDKGGCIDAQRRCNGEPDCADHSDEQDCETICPPNQFRCGDNQCITKKQQCDNYSDCPD
GSDELACEYVSPPSGGVPSAGTNTIGPVIAIILLVFVIGGAYFVCQRMVCRRYKGPGGTF
PHEYISGTPHVPLNFIAPSSSQHAAFQGISCGKSIMSSVSLMGSSSSGAPLYDRNHVTGA
SSSSSSSTKGAFYPQILNPPPSPATDRSLYNAEIFYSSNSPSTTRSYRPYHPARGAAPPT
TPCSTDVCDSDYTPHHPVGGPASSAGRWKAAGHGKHNKYYMDLNSDSDPYPPPPTPRSQY
LSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggatctaacgcgctcgggacgggaaatgggcgctcggctgcggctcgcgctgctgtgg
ggctgcctgctgctgtcggcggttgacggctcacctctcctgctgttcgccaaccgccgc
gacgtgcgcctggtggacgccgagggcgcgcgcgccgagtcggccgtcgttgtcagcgac
ctggaggacgcggcggcggtggacttcctgtactccgagggcctgatattttggaccgac
gtcagcgaggaggccatcaagcagacgcgctggaaccagtcgtccaactccctgaaggag
gcgctggggaccaggcagtccgtggtggtgtcggggctggacagtcccgacgggcttgcc
tgcgactggctcggcaggaagctctactggacggactcggagaccaatcggatcgaggtg
gccaacctggacggcacctccaggaaggtcctgttctggatggacctggaccagccgagg
gccatcgccctcaaccccgctcagagctacatgtactggaccgactggggagaagagccc
aggatcgagcgcgccgggatggacggcagcaacaggaaggtcatagtggtggtggacatc
tactggcccaacggtctgaccatagacctgctggagcagaagttgtactgggcagacgcc
aagctcagcttcatccacagggccaacctggacggatcggcacgtgagacggtggtggag
ggaaccctgacgcatccctttgcgctcacgctgtctgaggagaccttgtactggaccgac
tggcagactcgctccatccacgcctgcaacaaacacagcggagacaaaacccgggagatc
ctcagcggcatttactcccccatggacatccaggtcctggagtcctatcggcagccttac
atccagactccctgcagcgacaacaacggaggctgcagtcacctgtgcctgctgtccccg
gtccagcccttctacagctgcgcctgtcccaccggagtccagctgaaaccagacgggagg
acatgcaaaccaggagcggagcaggttttgctgctggctcggcggactgacctgaggaga
atctcattggacctgccagacttcaccgacatagtcctgcaggttgatgacattcgccat
gccatagccatagactacgacccggtggagggttacgtctattggacggacgatgaggtt
cgggccatccggcggtcgcacatcgacggcagcgatgccgtgatgctggttaccacggag
atcaaccacccggatggcatagcggtggactgggtggccagaaacctgtattggaccgac
accggcactgaccggattgaggtcaccaggctgaacggaacctctcggaagattttgata
tctgataacctggacgaacccagagccatcgtcctggaccccgtcaatggctacatgtac
tggaccgactggggcaggcaccccaagatcgagcgggcccacctggacggaacggagcgg
ctggttctgatcaacagctccttgggctggcccaacgggctggccatcgactacgccgcc
ggaaagctctactggggggacgccaagaccgacaaaatcgaggtgatcgacgtggacggc
ggcaacaggcagactctgctggaggacaagctgccccacatcttcggcttcaccctgctg
ggggaccacatctactggacggactggcagaggcggagcatcgagagggtccacaaggcc
acggccgtgcgggagatcatcatcgaccagctgccggatctgatggggctgaaggccacc
agagtgaccgagacgcacgggaccaacggctgcgctggaggcaacggcgggtgcagccac
ctgtgcttctggtgtcggcaggcggtgagctgcgcctgccccatggggatggagctcctg
tcagacctgcagacctgcgtggtgcccgaggccttcctgctcttcaccaacagggacaac
atcaggagtatctctctggggaccaacagcaacgacgtccccatccctctgaacggagtc
aaagaggcctccgctctggactttgacgtctctgaaaggaggatttactggacggacata
caggccaaagtgggtggaggaattcatacaatcagcagggcgtacatgaacggcagctcg
gtagaacacgtcatagagttcgggctggactacccagaaggcatggcggtggactggatg
ggacgcaacatctactgggccgacacgggcaccaaccgcatcgaggtggcccggctggac
ggccagtaccggcaggtcctggtctgcaaggacctggacaacccgcgctcgctggacaac
ccgcgctcgctggcgctggacccggccaacggctacatgtactggacagagtgggggggt
cggcctcggatagccagagcctacatggacggcagcaccgtcaccacgctggtggacaag
gtgggccgggccaacgggctgaccatcgactacctggaccatcggctgtactggacggac
ctggacacgtgcatgatcgaaagcaccaacatgcaaggcctccagagagagatcatagtg
gacgacctccctcaccccttcggcctgactcagtaccgggacttcatctactggaccgac
ttcaacctgcgcagcatcgagcgcgcggacaaacgcagcggactcaaccgcacggtggtg
ctgcagggccagctggagctgatgctggacatcctggtgttccactcctcccgccaggag
gggaccaacgagtgctcccacaacaacggcaactgcgcccacctgtgcctggccacgccg
gccggggcgcagtgccgctgcgcctcccactacacgctgaaccccgacgggcggaactgc
agctctccctccagcttcctgctcttcagccagaaggccagcatcagccgcatggtgctg
ggcgagcagagccccgacatcatcctgcccatccacgtcctccggaacgtccgggccgtc
agctacgacccgctggaccggctggtctactggctggacggccggcagaacatccgcagg
gccaaagacaacggagccatgtcgtccatgatcgtgagcagcagcgttcagccggtggac
aaccagctccacgacctgagcctcgacccctacagccgccacatctactggacctgcgag
acaaccaacagcatcaacgtgcagcggatggacggcgtcatggtgggcgtggtcctgagg
gacgacgccgacaagccgcgggccatcgtggtcaacgctgagaaagggtacatgtacttc
accacggtgcaggagcgctcggcgaagatcgagggagccagtctggacgggacggagagg
gagtccctgttcaccaccggtctgatcagacccgtcgccctggctctggacaacaaactg
gggaaactgttctgggtcgacgccgacctcaagcgcatcgagagcagcgacctgacggga
gccaatcgcatcgtcctgcaggactccaacatcctgcagccgacggggctgacggtgctg
ggagatcacctgtactggatcgaccggcaacagcagatgatcgagagggtggacaagctg
agcggagacggacgcacgcgcatacagggacggatctcctacctgacctccatccacgcc
gtggaggagatggacccacaggagtttgcatccaacccgtgttcccgtgacaacggcggc
tgctcccacatctgcatcgccaaaggagacgggacccctcgctgctcttgtcccatgcac
ctggtgttactgcaagacctgctgcactgcggagagcctcccacctgctccacggagcag
ttcacctgctccacgggggagatcgactgcatcccgatggcctggcgctgcgacggcatc
cccgagtgcgccgacagcagcgacgaggagaactgccccgtctgctccgcctaccagttc
cagtgtgacaaaggtggctgcatcgatgcccagcggcgctgcaacggcgaaccggactgc
gccgatcactctgatgagcaggactgcgaaacgatctgccccccaaaccagttccgctgt
ggcgacaaccagtgcatcaccaagaaacagcagtgcgacaactactccgactgtcccgac
ggatcggacgagctcgcctgtgagtatgtgtctcctccctcgggcggcgtccccagcgcc
ggcaccaacaccatcggccccgtcatcgccatcatactgctggtgtttgtgatcggaggc
gcttactttgtctgccagcgcatggtgtgtcggcgctacaagggccccggtggaacgttt
ccccacgagtacatcagcgggacgccccacgtgcccctcaacttcatcgcccccagcagc
tcgcagcacgccgccttccaaggtatctcctgtgggaagtccatcatgagctcggtcagc
ctgatgggcagcagcagcagtggagctcctctgtatgacaggaaccatgtgaccggcgcc
tcgtccagcagctcctcgtctaccaagggagccttctacccccagatcctgaacccgcct
ccgtctccggctaccgaccgctcactctacaacgcagagatcttctactcctccaacagc
ccgtccaccaccagatcatacagaccgtaccacccggcccgtggcgccgccccccccacc
actccctgcagcaccgacgtctgcgacagcgactacaccccccaccatccggtgggcggg
ccggcgtcgtcggcggggcgctggaaggccgcgggccacggcaaacacaacaagtactac
atggacctgaactcggactcggacccctaccctcctccccccaccccccgctcccagtac
ctgtcggccgaggagagctgccccccgtccccgtccacagagcgctcctacttccacctg
tgcccgccgcccccctcgccctgcaccgactcctcgtga
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