Gasterosteus aculeatus (three-spined stickleback): 120812652
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Entry
120812652 CDS
T07457
Name
(RefSeq) E3 ubiquitin-protein ligase arih1-like isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120812652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120812652
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120812652
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120812652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
120812652
NCBI-ProteinID:
XP_040024733
UniProt:
A0AAQ4PI26
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Position
Y:complement(1688474..1705767)
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AA seq
536 aa
AA seq
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MDSDEGYNYEYDDEEEECSEDSAEEEPEDDTLELGEVELADPVVAGGERDECGDTGGGGH
GPAEEEEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERY
FDGNLDKLFSECHVINPSKKPRVRPPINTRSSAQDMPCQICYLNFPNSYFTGLECGHKFC
TQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVE
CNRLLKWCPAPDCHHVVKVQYPDAKPVKCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCD
DDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYN
CNRYNEDDAKAARDAQEFNALLLQRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQK
MEEMQQHNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENA
TEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgagggttataactatgaatacgacgacgaggaggaggaatgtagcgag
gatagcgccgaagaggagcccgaggacgacaccctggagctgggagaggtggagttggcc
gatcccgttgtggccggtggagagcgagacgagtgcggggacactggtggagggggccac
ggacctgctgaggaagaggaagaggactaccgcttcgaggttttgactgccgagcagatc
ctccagcatatggtggagtgtatcagggaggtcaacgaggtcatccagaatcctgcaaca
ataacacgcatacttctcagtcacttcaactgggataaagaaaagctcatggaaaggtat
tttgatgggaatctggacaagcttttctctgagtgtcatgtcattaaccccagtaagaag
cctcgcgtccgtcctccaatcaacactagatcgtcggcacaggacatgccatgtcagatc
tgctacctaaacttccccaactcttattttacaggcctggagtgtggacacaagttctgc
acgcagtgctggggagattacctgaccaccaaaatcatagaagaaggaatgggacagacc
atttcttgccctgctcatagttgtgacattttggtcgatgacaacacagtcatgcgcctc
atcacagattctaaagtgaagttgaagtaccagcatttaattacaaatagttttgtagag
tgcaatcgactgttaaagtggtgccctgcaccagactgccatcatgttgtcaaagttcag
tacccagacgccaagccagtgaagtgcaagtgtggccgtcagttctgcttcaactgtgga
gagaattggcatgatcctgtcaagtgtaagtggttgagaaaatggataaagaaatgtgat
gacgacagtgaaacttcaaactggattgcagcaaatactaaggagtgtccaaaatgccat
gtgaccattgaaaaagatggaggctgcaatcacatggtttgtcggaaccagaactgcaaa
gctgagttctgctgggtgtgtctgggtccatgggagccccacggctcagcctggtacaac
tgcaatcggtacaatgaagatgatgcaaaggcagcccgagatgctcaagagttcaatgct
ttgttattgcagcgctccagggccgccttgcagaggtacctgttctactgcaaccgctac
atgaaccacatgcagagcctgcgctttgagcacaagctctatgctcaggtcaagcagaaa
atggaggagatgcaacagcacaacatgtcctggatcgaggtgcagttcctgaagaaggcc
gtggatgtgctgtgccagtgtcgctcaacactcatgttcacttatgtctttgccttctac
ctcaagaagaacaaccagtccattatttttgagaataaccaggcagacctggaaaatgcc
actgaggtactctctggctacctcgagcgggatatctcccaggattccttgcaggacatc
aagcagaaagtacaagataagtacagatactgtgagagcaggcgaagagtgctgctacag
catgtgcatgaaggctatgagaaggacctgtgggagtacattgaagattga
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