Gasterosteus aculeatus (three-spined stickleback): 120812659
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Entry
120812659 CDS
T07457
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120812659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120812659
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120812659
REST complex
120812659
Heterochromatin formation proteins
Other heterochromatin formation proteins
120812659
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
AbiJ_NTD5
Motif
Other DBs
NCBI-GeneID:
120812659
NCBI-ProteinID:
XP_040024737
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All DBs
Position
Y:1589663..1603740
Genome browser
AA seq
1289 aa
AA seq
DB search
MSNSRSLGSHQNVFIMKRRLADQETFFASQQRRLAGNAEAFQHRVLAPAPPPAVYEAVSD
NMQPTAGPQYSVPQAYQVSLLSQVSNVAQNSGGHSHTPNPTIHVGSHHHGPAVQSLGPSV
MSGHSHTAAPQASPQGQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSI
DTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQSADLVNVTTPGQIHHITPHGISVQ
NIPITGAATLHPPQLPATTALPPPTQPSPAKMSKPLPPQASTPSSQSNPSIPAYTSPRSP
PMLLLPPLSGTPTGPPMPNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQ
RNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAES
VRNDHGGTAKLQLNNKQRPNQNGCQIRRHPAPGTTAPAKKKPKLLNLKDSSGPEASKQGI
GTESLFFEKVRKALRSAEAYNNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKN
FLGYREMSHVEAYPKERATDGIAMEIDYASCKRLGSSYRALPKSYQHPKCTGRTPLCKEV
LNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRLLETVQRKL
SRMSAEEQAKFRLDNTLGGSSEVVHRKAIQRIYGDKAPNIIAGLKKNPAVSVPIVLKRLK
TKDEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDER
QEQASEENGVPQLTLAHEDSQILEDAAALIIHHVKRQTGIEREDKYKIKQIIYHFIPDML
FSQRGELSDVEEELEEEDEEETSLEGGASKKYNCVPGGGSPSKSKLLFSNTAAQKLRGCD
DDAYNLFYVNNNWYIFLRLHQTLCSRLLRLYGQAERQIQEEIKERDWEREVLGLTKEKSD
NPATQLRLKESMDIEVEDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYTAFTMDK
LIQSIVRQLQHIVSDEICIQVTDLYLSESASGANGGTASTQSSRSPAEATYQRRAEQLMS
DENCFKVMFSRSRLQVQLTVELLDTEEENSDEPMEAEHWSDYVGRYLNPDSTSPELREHL
AQKPVFLPRNLRRIRKYQKGREQLDKEALEGGKKSLEKEKMECMFKLNSYKMVYVFKSED
YMYRHTALLRAHQSHERVSTRLHRRFQAWVDTWAQEHVTGDMAAETDKWLMGDAREGLLP
CSTSRQPEVLHFVNINKYRVKYGPPGKVP
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattctaggtcactcggctctcaccagaatgtgttcataatgaagcggcgactg
gcggatcaggaaacgttttttgcatcccagcagcggcgcctagctggcaacgcggaggcc
ttccagcaccgcgtcctcgcccccgctcctcccccggcggtgtatgaggccgtgtctgac
aacatgcagcccacagcaggcccccagtactccgtcccccaggcataccaggtgtctctg
ctctcccaggtttctaacgtggcccagaacagcggcgggcattcgcacaccccgaacccc
accatccacgtggggtcccaccaccacggcccagcagtccagtcccttgggccctcggtg
atgtccgggcacagccatacagctgctcctcaggcctccccacagggccaacagttccag
aggctcaaggtagaagatgctctgtcttacttggatcaagtgaaactgcagtttggcaac
cagcctcaggtctacaacgactttctggacataatgaaagagttcaagtctcaaagcatt
gacacccccggggtcatcagcagagtgtcgcagctcttcaaaggtcatcccgacctcatt
atgggcttcaacaccttcctgccacctggctacaagatcgaggtccagagcgccgacctg
gtcaacgtgaccacgcccggtcagatccaccacatcaccccgcatggcatttcagtccaa
aacatccccataacgggagcggcgaccctccatccgccccagctcccggccaccacggcc
ctgccccccccgacgcagccctcccctgccaagatgagcaagcctcttccgccccaggca
tcgacgccgagcagccagagcaatccgtccatccccgcgtacacctcccctcgctccccg
cccatgctgctcctgccgccgctcagcgggacccccacggggccgcccatgccgaacaac
cagccggtggagttcaaccacgccatcaactacgtcaacaagatcaagaaccgcttccag
ggccagcccgacatctacaaagctttcctggagatcctccacacgtaccagaaggagcag
cgcaacgccaaggaggccggtgggaactacaccccagccctgacggagcaggaggtgtac
gctcaggtggctcgactcttcaagaaccaggaggacctgctctcagagtttgggcaattt
ctccccgatgccaacagttcggtgctgctgagtaagaccacagctgagaaggccgagtcg
gtacggaacgaccacggcggcaccgccaagctgcagctcaacaacaaacagaggcccaat
cagaacggctgccagatccgccgtcatccggctcccgggaccacggcccctgccaagaag
aagcccaagttattgaatttgaaagattcctccgggccggaggccagcaagcagggcatc
ggaacagaatctctcttctttgagaaggtgcgcaaagccttgcgaagtgcagaagcctac
aacaacttcctgcgatgcctggtcatctttaatcaggaggtgatctccagagcggaacta
gttcagctggtgttgccctttttagggaaattcccagagctgttcaactggttcaaaaac
ttcttgggatatcgggaaatgtcccacgtcgaagcataccccaaggagagggccaccgac
ggcatcgccatggagatagactacgcctcctgcaagagactgggttccagttacagagct
ctgcccaaaagctaccaacatcccaagtgcaccggcagaactccactttgtaaagaggtc
ttaaatgacacctgggtctccttcccctcctggtctgaggactctacatttgtcagctcc
aagaagactcagtacgaggagcatatctaccgatgcgaggacgaacgctttgagttggac
gtggtactggagacaaacctggcgactatcagactgctggagacggtacagcggaagttg
tcccgaatgtccgcggaggagcaggccaagttccgcttggacaacacgctgggcggctct
tcagaggtcgtgcaccgcaaggccatccagaggatatacggagacaaggcgcccaacatc
atcgctggcctgaagaagaacccggcggtttctgtccccatcgtgttgaagaggttaaag
accaaggatgaagagtggcgggaagcccagcgaggcttcaacaagatctggagggagcag
aacgagaagtattacctcaagtccctcgaccaccaaggcatcaacttcaaacagaacgac
accaaagtgcttcgatccaagtcgctgctgaatgaaatcgaaagcatctacgatgagcgc
caggagcaggcgtccgaggagaacggcgtgccccagctaacgctggcgcacgaggacagc
cagatcctggaggacgcggcggcgctcatcatccaccacgtcaagcggcagaccggcatt
gagagggaagacaagtacaagatcaaacagatcatctaccacttcatccccgacatgctg
ttctcccagaggggcgagctctccgacgtggaggaggagctggaggaggaggatgaagag
gagacgagcctggagggaggcgcgtccaaaaagtacaactgcgttcccggcggcgggagc
ccctccaagtccaagctgctgttcagcaacacggcggcccagaagctgcgcggctgcgac
gacgacgcatacaacctcttctacgtcaacaacaactggtacatcttcctgcggctgcac
cagacgctgtgctcgcgcctgctgcggctgtacggccaggcggagcgacagatccaggag
gagatcaaagaacgggactgggagagggaggtcctgggactgacgaaggagaagagcgac
aatccggccacccagctgcgactgaaggagtccatggacatcgaggtggaggattactac
tcggccttcttggagatggttaggaatttgctggatggaaatatggaggcttcccagtac
gaagactccctgagggaaatgttcaccattcacgcttacacggccttcacaatggacaag
ctcatccagagcatcgtccggcagctccagcacatcgtgagtgacgagatctgcatccag
gtaacggacctctacctctcggagagcgccagcggtgccaacggagggacggcgtccacc
cagtcctcacggagccccgccgaggccacgtatcagcggagagccgagcagctcatgtcg
gatgagaactgcttcaaggtgatgttttcgaggagcaggttgcaggtgcagctcactgtg
gagcttctggacaccgaggaggagaactcagacgagcccatggaggcagagcactggtcg
gattatgttggacgctacttgaacccagattccacctcacccgagttgagggagcacctc
gctcagaagcccgtttttcttcccaggaatctgagacggatccggaagtaccagaagggc
cgcgagcagctggacaaagaggcgctggagggtggcaagaaatccctggagaaggagaaa
atggagtgcatgttcaaactcaactcctacaagatggtgtacgtctttaagtctgaggat
tacatgtacagacacactgccctgctgcgagctcaccagtcacacgagcgggtgagcacg
cggctgcacaggcgcttccaggcctgggtggacacgtgggcccaggagcacgtgaccggc
gacatggccgccgaaaccgacaagtggctgatgggcgacgcgcgtgaaggcctgctgccc
tgctccaccagccgccagccggaggtcctgcacttcgtcaacatcaacaagtaccgcgtc
aagtacggcccgcccggcaaggtgccgtag
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