Gasterosteus aculeatus (three-spined stickleback): 120812691
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Entry
120812691 CDS
T07457
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120812691
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120812691
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
120812691
NCBI-ProteinID:
XP_040024791
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Position
Y:complement(3846963..3863257)
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AA seq
704 aa
AA seq
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MPSAMNANRTVQSASPDVGSAPGSMGNFALGGQAEVLKQVLCVLDKKVRNLEKKKSKLDD
YQVKKDKGELLNQDQLDALNKFQEITYNLEFGRELQKTFITLGQDIQKVVKKSARREQLQ
REEAGQRRLKTILQLQFLLDRLGEDNVRRDLKQGVGGSPMLTDVHLAAFDEFYKLVVPDC
DQSVRLVDRYEEASVHLWDLLEGKNRAVVGTTYKALRHTLDQVMLSGYFDQVQSHQNGVC
EEEEAEEQAPAAAAVAEAAAASADVVAESSKAEEQSQTADPELEVVEEFTDSIAVEKTEF
PDGTYSGSEKERGDEWATETEVPYSPVVPVFHSQAVSAIQQQQPPPPVQPAASPVALETH
PLNLVSPVPPTDPLVRKQVVQDLMAQMQGMYNFMQDSMLEFDGPFDPVIVSVQPMKPAQN
MDIPQIVCPPAHPESRLSQPKTVPVQPDTTQVSIVSPTPLPMYQTSHSPDPRPSTETIDP
IQTSSSSEQPPPFAAHPPVSQTQVFQPVSKAPHSSGINVNAAPFQSMQTVFNLNAPVPPA
NETEALNQASQYQNSYNQAFSSQPQHPVEQTEMQPEPLQSVVRAFNSQDQLGGHQQPPQQ
GPGFARQGQSFYNSRGMSRGGPRNARGMINGYRGSSNGFRGGYDGYRPPFTNTPNSGYGQ
TQFNTPRDYSNGNYQRDGYQPNYKRGAGQGPRGVSRGSTQAIRS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcgatgaacgcaaaccgaacagtgcagtctgccagcccagatgtgggatct
gctccagggtcaatgggcaattttgcacttggtggacaggctgaagttttgaagcaagtg
ctgtgtgtcctcgacaagaaggttcgcaacttggagaaaaaaaagagtaaactggatgac
tatcaagtcaagaaggataaaggggagcttctcaaccaggaccagctggacgcactcaac
aaattccaggaaatcacctataacttggaatttggccgagagctgcagaagacgttcatc
acactgggacaagatatccagaaggtggtgaagaagtctgcacggcgggagcagctgcag
cgggaggaggcagggcaaaggaggctgaagaccattttgcagctgcagttccttctggac
cggctgggagaggacaatgtgcggcgggacctgaagcagggagttgggggctcaccaatg
ctgacggacgtgcaccttgcagcttttgatgagttctacaagttagtggtaccagactgt
gaccaaagtgtcaggttggttgaccggtatgaagaagcatctgtgcacctctgggaccta
ctggaagggaagaacagggctgtggtcgggacaacatacaaggcactgagacatactttg
gaccaggttatgctgagtgggtactttgaccaggtgcaatctcaccaaaacggagtgtgt
gaggaggaagaggcggaggaacaagccccagcggcggcggcggtggctgaagcagctgca
gcatctgcagatgtcgtagctgagtcgtcaaaagcagaagagcagagtcagactgctgat
ccagaactggaagtagttgaggagttcacagattccattgcggtggaaaaaacagagttt
ccagacggcacatacagcggcagcgagaaggagcggggggatgagtgggccacggaaaca
gaggttccttattcgcctgttgtgcctgtcttccactctcaggcagtcagtgccattcaa
cagcagcagccaccgccgcctgtgcagcctgcagcttcacctgttgccctggagacccac
ccattgaacttagtgtctcccgtgcctcccactgaccccctggtcaggaagcaggtggtg
caggacttaatggcacagatgcagggaatgtacaacttcatgcaggactctatgctggaa
tttgacggaccctttgacccagttattgtctcagtacagcctatgaaacctgctcagaac
atggacataccacagatcgtgtgtcctccagctcacccagagtcccggctatctcaaccc
aaaactgttcctgtccaacctgacaccacgcaagtttccatcgtctccccgactccgctc
cccatgtatcagacttcacacagccccgatcctcgaccctcgacagaaaccatcgacccc
atccagacgtcctcgtcgtcggagcagcctccaccctttgcagctcacccacctgtctct
caaactcaagtttttcagcctgtttccaaagctccacacagcagtggcattaatgtcaac
gccgcaccattccagtcaatgcagacagtgttcaacctcaatgccccggtcccaccagct
aatgagacggaggctctgaaccaggccagccaataccagaacagctacaaccaagccttc
agcagccagccgcagcatcctgtggagcagaccgagatgcagccagagccactgcaatct
gtagttcgtgccttcaattcccaagaccagttgggaggccatcaacagcctccacagcag
ggcccaggctttgcccggcagggtcagtccttctacaacagcagaggcatgtctcgaggt
gggcctcgcaatgccaggggcatgatcaatggctacagaggctcatccaatggcttcaga
ggtggctacgatggttatcgtcctcctttcaccaacactcctaactccggttatggacag
acgcaattcaacacacctcgggattactcaaacgggaattatcagagggatggttaccaa
ccaaactacaagcggggagctggccagggacccaggggagtgtcgagaggcagcactcag
gcaatacgatcctga
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