Gasterosteus aculeatus (three-spined stickleback): 120812782
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Entry
120812782 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor RFX4-like
KO
K09174
regulatory factor X 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120812782
Transcription factors [BR:
gat03000
]
Eukaryotic type
Other basic domains
RF-X
120812782
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
120812782
NCBI-ProteinID:
XP_040024921
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Position
Y:12465962..12482430
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AA seq
736 aa
AA seq
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MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNMSNDEHEEKENNRASKPHSTPA
TLEWLEENYEIAEGVCIPRSALYMHYLDFSEKQDTQPVNAASFGKIIRQQFPALTTRRLG
TRGQSKYHYYGIAVKETSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPSSLPEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSTTVVNIVGVCDSILYKAISSVLMPTVLQALPDSLTQVIQIFAKQLDEWLKKALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSADITFQMLEDWRNVDLNSITK
QTLYTMEDSQEEHRQLIIHLYQEFDRLLEEQSPIEAYIEWLDLMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANDL
MRAMKSEGSTAEREEKFPVTETTVASPSPRPFSPARSVHSVCVSSAGSPTAAVSPEYAGV
PATTTTGAVQSYTWSLTYTVTTAGGSTPEAGQQLSCMRSSAPVPPPSSTHRMPVYREEHG
YTGSYNYGSYANQHPHSIQSQYPSLAHEPAITTPLHYSAYHRSSAQYQLNGQMSRMEPCL
MSSTPRLHAAPAAPRWPDVSPANACYSSPPMHSSRYATSGDLYSPLGPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgatatggattccacagagagttggattgagaga
tgcctcaacgagagtgagagcaagcggtattccagtcacacgtcactggggaacatgtcc
aacgatgaacatgaagaaaaagaaaacaacagagcctcaaaaccacattcgacaccggct
actctggaatggctagaggagaactatgagatagctgagggtgtgtgtatcccgcgaagt
gccctctacatgcattacctagacttcagtgagaaacaggacacgcaacctgtgaacgca
gccagctttggaaagatcataaggcagcagtttccagcgttgacgaccagaagacttggg
accagagggcagtctaagtaccactactacggcatagccgtgaaggagacctcccagtat
tacgatgtgatgtactccaaaaagggggcggcctgggtgaacgagaccgggaagaaagag
gtcacgaagcagacagtggcgtattcaccgcgctccaaactgggaacgctcctgccagag
tttccaaatgtcaaagacctaaatttgccctccagcctgccagaagagagggtgtcgacc
ttcatcatgatgtacagaacgcactgtcagaggatactggacactgttatccgagccaac
tttgatgaggtccaaagcttcctgctgcacttctggcagggcatgccgccccacatgctg
ccagtgctcggctccaccaccgtggtaaacatagtcggggtttgcgactccatcctctac
aaggccatctccagcgtgctgatgcccaccgtcctgcaagccctgcctgacagtttgact
caggttattcagatatttgccaaacagctggatgagtggctcaaaaaagcacttcatgac
cttcctgaaaacctgaggaatatcaaatttgaattgtccagaagattttctcagattcta
aagcggcaaacgtcattaaatcatctctgtcaggcctcgcggaccgtgataaacagtgcc
gacatcacctttcaaatgctggaggactggaggaatgtggacttgaacagcatcactaag
cagacactttacaccatggaggactcacaagaggagcaccggcagcttattatccacctg
tatcaggagtttgatcgtctattggaggagcagtcgccaatcgaggcgtacatcgagtgg
ctggacctgatggtggaccgctgcgtcgtcaaggtggcagggaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctgatgtggtcgtgttttggtaccagagtcatccgg
gatatgaccctccacagcgcgcccagcttcggctccttccaccttatccacctgatgttt
gatgactatgtgctttacctgctggagtcgctgcactgccaggagagagccaacgacctc
atgagggccatgaagagcgagggcagcacagcagagagagaggagaaattcccggtgaca
gaaaccaccgtcgcctccccgtccccacgacccttctctcccgcccggtcggtccactcg
gtttgcgtttcctcggccggctcccccacggcggctgtgtccccggagtacgcaggcgtc
cccgccaccaccaccacgggcgctgttcagtcatatacctggtcccttacatacacagtg
acaacggccggcggctccactccagaggccggacagcagctgtcctgtatgaggagcagc
gctccagtgccaccgccgtcctccacccaccggatgcctgtctacagggaggagcatggg
tacactggtagctacaactacggcagctacgccaaccagcatcctcactccatccagagc
cagtatcccagtctggcccatgagccggccatcacaacccccctccactactccgcctac
caccggtcgtctgcacagtaccagctcaacggccagatgtcgcgcatggagccgtgcttg
atgagcagcactccgcggttacacgctgcacccgccgccccccggtggcccgacgtgtca
ccggctaacgcctgttacagcagcccacctatgcattcgtcccgctacgccacctccggg
gacctatactctcccctcggcccacgcaggaactcagagtatgaacactcgcagcatttc
ccaggctttgcctacattaacggagaggccaccacgggctgggcaaaataa
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