Gasterosteus aculeatus (three-spined stickleback): 120813112
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Entry
120813112 CDS
T07457
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120813112 (ctr9)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
120813112 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
120813112
NCBI-ProteinID:
XP_040025161
UniProt:
G3PSY3
LinkDB
All DBs
Position
II:10632866..10639498
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AA seq
1155 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKDNA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GFFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQDCKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLCKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDILRQQIKKEQTEKRNKEAEEQKKLLEQRALYVEKTKNLLTFAEGSKELAK
EKKKSGGRRKKGGDMDEFVNDDSDEDLPLKKKKKKRGGSGSEPDEGAEGDKPRKKKRKPA
RGDDSDDEEGGSRPKKQRKPKERKRVEKQQPERLPPSLKGKIKSKAIISSSESSSDEDGL
KIAEDRHQRDSGSGSDDGGGHRKQIPSDSESDGGRKHSGSEAGSPRRSGGSEDDDSGSDR
PVKKRRVQRQSDSEQSDNESKRSRSGSDDESRPSSPAAASGRGSDRGSEAGSDIQGSPRH
SDNGSEPEASNNDSD
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctccatcgagatccctttgcgggacaccgatgaggtcatcgagcttgac
tttgaccagctgccagaaggagacgaggtcatcagcatcctgaagcaggaacacacacag
ctgcacatatggattgctttggcgttggagtactacaagcagggcaaaacagaggatttt
gtcaagcttttagaagcagcccgtatcgatggaaacctcgactacagagaccacgagaaa
gaccagatgacctgtctggacacattggcagcttactatgttcagcaagcacgcaaagag
aaaaacaaggatgccaagaaggagcttatcacgcaggccacgctgctctacacgatggcc
gacaagatcatcatgtacgatcagaaccatttgctgggacgagcctgtttctgcctgctg
gaaggagacaagatggaccaggctgacgctcagttccactttgtcctcaatcagtccacc
aacaacatccctgctctgcttggtaaggcttgcatctccttcaataaaaaggattacaga
ggtgcactggcgtactacaaaaaggccctccgcactaacccaggctgcccagctgaggtc
aggctggggatgggccactgttttgtcaagctcagcaaactggagaaggcccgtttggcg
tttggccgagccctggagcttaattccaaatgtgtgggagctctagttggtttggcggtt
ttggagctcaacagcaaggaggccgattccatcaagaacggagtgcagctcctgtctcgg
gcttacaccatagatcccagcaaccccatggtgctcaaccacctcgccaaccactttttc
ttcaaaaaggattacagtaaagtgcagcatctggccctccacgctttccacaacaccgag
gtcgaggccatgcaggctgagagctgctaccagttagctcgctcatttcacgtgcaggag
gactatgaccaagcgtttcagtattactaccaggccactcagtttgcctcatccaccttt
gtgttgcccttcttcggcctgggccagatgtatgtgtatcgaagggacaaagacaatgcg
gcacaatgcttcgaaaaggttttaaaagcctaccctaataactacgagacaatgaaaatc
ctggggtctctctatgctacgtctgatgatcaggaaaagagagacattgcaaaaggtcat
ttgaagaaggtaaccgagcagtacccagacgacgtggaggcctggatcgagctggctcag
attctggagcagactgatattcaaggagcgctgtctgcatacggcacagccacccgcatc
ctgcaggagaaggtgcaggccgacgttccacctgagatcctcaacaacctcggggctctt
cacttcagactgggaaacctgggagaggccaagaaatactttcttgcgtctctggagcgg
gccaaagctgaaggggagcatgacgagcattactacaacgctatttctgtcactacgtct
tacaatctggcccgcctgtacgaggccatgtgtgaatttcacgaggctgagaaactctac
aaaaacatcctgagagagcatcccaactacgtggactgttatctgcgtcttggagcaatg
gcccgcgacaaaggaaatttctacgaggcctctgattggttcaaagaggccctgcagatt
aaccaggatcacccggatgcttggtccctgattggaaacctccacttggccaaacaggaa
tggggaccgggtcaaaagaagtttgagcgtattctgaagcagccgtccacacaaaatgac
acctactccatgctggctctgggtaacgtgtggctgcagacgctgcaccagcccacgaga
gaccgggaaaaggaaaagcgacaccaggacagagccctggccatatacaaacaagtcctg
cgaaatgactccaagaacctctacgctgctaatggcatcggtgccgtcctggcccacaag
ggcttcttcagggaggctcgcgacgtgtttgcgcaggtgagggaggccacggcagacatc
agtgacgtctggctcaacctggctcacatctacgtggagcagaagcagtacatcagcgct
gtgcagatgtacgagaactgcctgaagaaattttacaaataccagaacaccgaggtgctg
ctgtacctcgcgagggcacttttcaaatgtggcaaactgcaagactgcaagcagatgctg
ctgaaggcccgccacgtggcgcccagcgacacggtgctcatgttcaatgtggccctggtg
ctccagagactggctactttagtgctgaaagatgagaaaagcaacttgaaggctgtgctc
agcgctgtcaaggagctggaactggctcacaggtacttcagctacctctgcaaggccggc
gacaagatgaggtttgatctggctctcgccgcttctgaggccaggcagtgctctgacctt
ctgagtcaggctcagtaccacgtggcacgagccaggaagcaggatgaggaggagaaggag
ctccgtgccaaacaagagcaggaacgggacatcctgcgtcaacagattaagaaagaacag
acggagaagcggaacaaagaggcggaggaacagaagaagctcttggagcagagggctttg
tacgtggagaagaccaagaacctgctcaccttcgcagagggatcaaaggaactggccaaa
gaaaagaagaagagcggtggacgccgtaagaaaggaggcgacatggatgagtttgtcaac
gatgactccgatgaagacctgccgctgaagaagaagaagaagaagcgagggggcagcggc
agcgaaccggatgagggcgcggagggagataagccgcgcaagaagaagcggaaacctgct
agaggggatgacagtgatgacgaggaaggaggatcacgacccaagaagcagcgtaaaccc
aaagaacgcaagcgggtggaaaagcaacagcctgagcgtctgccgccgtctctcaaagga
aagatcaagtctaaggccatcatctcctcttcggagtcctcgtcagatgaggatggcctg
aaaatagccgaagacagacaccaaagagacagcggttcaggatccgatgatggaggcggc
cacaggaagcagattccatcggacagcgagtcggacggagggaggaaacactcgggcagc
gaggcgggcagccctcggcgctctggtggctcggaggacgacgactctggcagcgaccgt
ccggtgaagaagaggagagtgcagcggcagtcggactcggagcagtcggacaacgagagc
aagaggagtcggtcggggtccgacgacgagtccaggcccagttcacccgccgcagcgtcg
ggccgggggtcagataggggctctgaggcgggatcagacatccagggctccccgcgccac
tccgacaatggctctgagccagaagcctccaacaatgacagcgattaa
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