Gasterosteus aculeatus (three-spined stickleback): 120813276
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Entry
120813276 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: zinc fingers and homeoboxes protein 1-like
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120813276
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120813276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Homez
zf-C2H2_7th_ZNF462
zf-H2C2_5
zf-C2H2_ZNF462_11
Actin_micro
HTH_72
Motif
Other DBs
NCBI-GeneID:
120813276
NCBI-ProteinID:
XP_040025243
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MASRRKSTTPCMVPPRAAVDSDQEMEDAADAAEPEEGDGAEEPEEARPDHCLEPGAAEGG
YECKYCSFRTSELNLFTVHVDTEHPDVVTNTSYVCMECDYHTKSYDTLLAHNARLHPGED
NFTRTMVKRHNETVFQQTVNDLTFDGGFVKVEAEEEAEETSRNSIALSKTPIMRIRSRPE
HKKFAALHRMAVDDVIKVESGEEGEEEPPALSPAPAAAPPRLIPVSAPLQVHAVPQSIVV
NSSNMLQFRGGSGGGGGAVLPPGTLAQVLSALQNQQNCSQTQLLIPISSIPTYNTAMDNN
VLLVSAYNRFPYPSVSEIMGLSSQTKFSEEQIKVWFSAQRLKHGVSWTPEEVEEARRKKF
NGTVQTVPQTITVIPANIAAAANGLQSIFQTCQIVGQPGLVLTQVAGSGSAVPVPSPITL
TVAGVPGNQPKAAEPAATESKTEMSGGAAAALDAAAAKPKKSKEQLAELKASYGRRQFAT
EAEISRLMQVTRLSKRAIKKWFSDTRYNQRNSKDHHGAPLGEATPGRAPGGGRGGAGRNS
GGLNDSDNNNNNNHAPGAASTTIVIDSSDDASDCSPMSGAAPSASNPRVKFRHAFPDFTP
QKFKEKTPEQLLVLEASFQKSDTPPDEELSRLRGATKLTRREVDAWFTERRKMPSKEEEE
EDEEEEEASSSARTPSGRKVVKKTPEQLHILKKAFVRSQWPTSEEYDQMAEDSGLPRIYI
VNWFGDTRYACKNSNLKWYYLYQSGKVDEPLNGRAKTPKKSRKRFRGWSRRTRRPYPCKR
SPQGGGATAIKVKSGKSFLKDYFLKHRGLSERDLDDLVTKSSMSYEQVRDWFSQTAGRVE
EGREPFSDEEEDGEEDEEEEEEEEEEEEEVVVDPAEERADNVEEMEVKEQGEEATGDNCN
EEEEGEEEEEEVIQEEVIQEEVIQEERKGVSQSQPPAEERT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccggaggaagtccaccaccccgtgcatggtccctcctcgggcggccgtggac
tcggaccaggagatggaggacgcggccgacgccgcagagccggaggagggcgacggcgcc
gaggagccggaggaggcccgcccggaccactgcctggagcccggcgccgccgaggggggc
tacgagtgcaaatactgcagcttcagaacgtctgagctcaacctcttcactgtgcacgta
gacacggagcacccggacgtggtcaccaacacctcgtacgtctgcatggagtgtgactac
cacaccaagagttacgacacgctgctggcccacaacgctcgcctccacccgggcgaggac
aacttcacccgcacgatggtgaagcgccacaacgagacggtcttccagcagacggtcaac
gacctcaccttcgatggcggcttcgtgaaggtggaggcggaggaggaggcggaggagacg
tcccgcaacagcatcgctctgagcaagacgcccatcatgaggatcaggagccgtccggag
cacaagaagttcgccgccctgcacaggatggccgtcgacgacgtcatcaaggtggagagc
ggcgaggagggggaggaggagccacccgcgctgtctcccgccccggccgccgcccccccg
cgcctcatccccgtctccgcgccgctgcaggtccacgccgtcccgcagagcatcgtggtc
aacagctccaacatgctgcagttcagaggggggtcgggcggcggggggggcgccgtgctg
ccccctgggacgctggcccaggtgctgtcggctctgcagaaccagcagaactgcagtcag
acgcagcttctcatccccatcagcagcatccccacctacaacacggccatggacaacaac
gtcctgctggtcagcgcctacaacaggtttccgtacccttcggtctcggagatcatgggt
ttgtcttcgcagaccaagttcagcgaggagcagatcaaagtctggttctccgcccagcgg
ttgaaacacggagtgagctggacgccggaggaggtggaggaggcgaggaggaagaagttc
aacggcacggtgcagaccgtccctcagaccatcaccgtcatcccagccaacatcgccgcg
gccgccaacggcctccagtccatcttccagacctgccagatcgtgggccagccgggcctc
gtcctcacgcaggtggccggcagcgggagcgccgtgccggtcccctcccccatcaccctg
acggtcgcgggcgtccccggcaaccagcccaaagccgccgagccggcggccaccgagtcc
aagacggagatgtctggcggcgcggcggctgccctggacgcggcggcggccaagccgaag
aagtccaaggagcagctggcggagctgaaggcgagctacggccgcaggcagttcgccacg
gaggcggagatctcgcggctcatgcaggtcaccaggctctccaagcgggccatcaagaag
tggttcagcgacacgcgctacaaccagaggaactccaaggatcaccacggcgccccgctg
ggcgaagccacacctggccgggcgccgggcggggggcgagggggcgccgggaggaacagt
gggggcctcaacgacagcgacaacaacaacaacaacaaccacgccccgggcgccgcctcc
accaccatcgtcatcgactccagcgacgacgccagcgactgctccccgatgtccggcgcc
gccccgtccgccagcaacccgcgggtcaagttccgccacgccttccccgacttcacgccg
cagaagttcaaggagaaaaccccggagcagctgctcgtcctggaggccagcttccagaaa
tccgacacgcccccggacgaggagctgagccggctgcgcggcgcgaccaagctgacgcgg
cgcgaggtggacgcctggttcaccgagcggcggaagatgccttcaaaggaggaagaggag
gaggacgaggaggaggaggaggcctcgtcctcggcgcgcacgccctccggcaggaaggtg
gtgaagaagacgccggagcagctccacatcctgaagaaggccttcgtgcgctcgcagtgg
ccgacgtcagaggagtacgaccagatggcggaggacagcggcctgccgaggatctacatc
gtcaactggttcggagacacgcgctacgcctgcaagaacagcaacctcaagtggtactac
ctgtaccagagcgggaaggtggacgagccgctgaacggccgggctaagaccccgaagaag
tccaggaagcggttccgcggttggtccaggaggacgcggcggccgtacccctgcaaacgc
tccccacaagggggcggcgccaccgccatcaaggtgaagtccgggaagtcgttcctgaag
gactatttcctgaagcaccgcggcctcagcgagagagacctggacgacctggtgaccaaa
tccagcatgagctacgagcaggtgagggactggttctcccagaccgctggcagggtggag
gagggccgggagcctttcagcgacgaagaggaggatggggaggaggacgaagaggaggag
gaggaggaggaagaagaggaagaggaggtggtggtggatcctgctgaagaacgtgcagac
aacgtagaagagatggaggtgaaagaacaaggagaagaagccactggtgacaactgcaat
gaggaagaggagggggaggaagaggaggaggaggtgatccaggaggaggtgatccaggag
gaggtgatccaggaggagcgtaaaggtgtcagccaatcacagcccccggcagaggagcga
acatga
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