Gasterosteus aculeatus (three-spined stickleback): 120814939
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Entry
120814939 CDS
T07457
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120814939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120814939
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120814939
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120814939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
120814939
NCBI-ProteinID:
XP_040025943
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MFGANRKKFMEGGIESDYADDSSLYYTQQSMFPPHRPDKDMLASSSASSAGQLSQLGASL
YGPQSALGFPMRGMNSSAAPQLSRSGLNQSANQLPSHASAANTGTMHTPPSPSSRGILPM
STRSVLNLIQLVGGPTGAVRAGWEGRTAMGIPTRSLPTIIGMPKQSQEAQSLRSQEVPME
FLRSGEKLGPWKVSTSSLSEGTNGSENVTGLDLSDFPALADRSRRDGGSNPTPLLNPLAG
RAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQSKDTTSASEDSKTRAHVLTRPIFSE
CFFPPFLSNQNLNSSGKPASNSDGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPIGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYEKLEERPHVPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaccggaagaagtttatggagggagggatagagagcgactacgcagac
gactccagcctctactacacccaacagtccatgttccctccacaccggcctgacaaagac
atgttggcctcctcctctgcttcctcggcgggtcagctgtcacagctgggagccagttta
tacggcccacagagtgctttggggtttcccatgcgagggatgaacagcagcgcagcgcct
cagttaagtcgaagtggtttgaaccaatcagccaaccagctcccgagtcacgccagtgca
gccaacacgggcaccatgcacacgcccccctccccgagcagcagggggattctgcccatg
agcacccgcagcgtgctgaacctcatccagctagtgggggggcccacgggggcagtccgg
gcgggatgggaaggaagaacagccatgggaatccccacccggtctctaccaaccatcatc
ggcatgcccaaacagagccaagaggcgcaatcccttcgcagtcaagaagtgcccatggaa
ttcctgcgttctggtgagaaacttggaccttggaaagtttccactagctctctgtctgaa
ggtacaaacggcagtgagaatgtgacgggtttggacttgtcggacttcccggccctggcg
gacaggagtcgaagggacgggggatcgaacccgacgccgctgctcaacccgctggctggt
cgggccccgtacgttggtatggtaaccaagccgtccagtgagcagtcgcaggacttctcc
atccacaacgaagacttccccgccctccccgggcccaactaccaatcgaaagacaccacc
agcgccagtgaggacagcaaaacgcgcgctcacgtcctgactcgtcccattttttcggaa
tgttttttccctccgtttttgtccaatcagaatctaaactcgtcgggaaagcccgcctcc
aactccgacggtccaaagttccctggcgacaagagctcggcgcctagcaacaacaaccag
cagaagaaagggatccaggtgcttcccgacgggcgcgtgaccaacatcccgatcggcatg
gtaacggaccagttcgggatgatcggcctgctgacgttcatccgggcggcggagacggac
cccggcatggtgcacctggcgctgggctctgacctcaccacgctgggcctcaacctcaac
tcccccgagaacctctacccgaagtttgcgtctccgtgggcgtcggctccgtgtcgaccg
caggacatcgacttccacgtgccctcagagtatttaaccaacatccacatcagggacaag
ctagcagccatcaagttgtctcggtacggtgaagacctgctcttctacctctactacatg
aacggaggagacctcctacaactcctggctgcagtagaactgttcaaccgggactggcgg
taccacaaagaggagcgggtctggatcacgcgggccccggggatggagcccacgctgaag
accaacgcctacgagaggggcacctactacttcttcgactgcctcaactggaggaaggtg
gccaaggagttccatctggagtacgagaagctagaagagcgacctcacgttccctccacg
ttcaactacaatcccgcccagcaggccttctga
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