Gasterosteus aculeatus (three-spined stickleback): 120815234
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Entry
120815234 CDS
T07457
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gat04054
]
120815234
Pattern recognition receptors [BR:
gat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120815234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
120815234
NCBI-ProteinID:
XP_040026163
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
SSEVPTSPSAQQHQTHLDSIFMLLEENILTFVKNELKKIQKVVSSDYPECLEKEDEEVLD
EEQRMSREAFVKISVHFLRRMKQEELAERLQSRLHAAVCQRELKSDLKKKFQCVFEGIAK
AGNPTLLNEIYTELYITEGGTAEVNEEHEVRQIETASRRPARPETTIRQEDLLKASAGGE
EPIRTVMTKGVAGIGKTVLTQKFTLDWAEDTDHQDIQFTFPFTFRELNVLREKKFSLVGL
VHHFFSETRAAGICRFEKFQVVFIFDGLDECRLPLDFHNNEILTDVTESASVDVLLTNLI
RGKLLPSARLWITTRPAAANQIPPECVSMVTEVRGFTDPQKEEYFRKRFTDEEQASRIIS
HIKTSRSLHIMCHIPVFCCITATVLEEVLKTREGGELPKTLTEMYIHFLVVQSKVKKVKY
DGGAETDPHWSPKSRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQ
IFREERGLYQDNVFCFVHLSVQEFLAALHVHLTFFSSGVNLLSEEQTTSLLSKVFRDKPK
PKRLYQSAVDKALQSPNGHLDLFLRFLLGLSLEANQTLLRGLLTQTGSRSKTNQRTVQYI
KEKISENVSPEKSINLFHCLNELNDGSLVEEIQQSLRSGRLSTEELSPAQWSALVFILLS
SEEDPEVFDLRKYSASEEALLRLLPVVKASNKVLLSGCNLSERSCDALSSVLSSQSCSLR
ELDLSNNHLQDSGVKLLSAGLKSPHCELETLRLSDCLITEEGCASLASALSSNPSHLREL
DLSYNHPGDSGVKLLSAGLEDPHWRLETLRVEPDGVRWLTPGLRKYSCELTIDTNTVNKH
LKLSDNNRTVTCVEEDQSHPDHPDRFDYCLQLLCRTGLTGRCYWEVEWRGKVDVSVSYRG
IRRKGNSDDCWFGYNDQSWSLICSGKGYSVRHNETRTPITSSFFSSSSSSSSHRVAVYVD
CPAGSLSFYRVSSDTLIHLHTFSTTFTEPLYPGFGFRFSPSSSVSLCPLQEGES
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
agctcagaggttcccacaagtccgtctgcccagcagcatcaaacacacctggactccatc
ttcatgctgctggaggagaacatcctcacttttgtgaagaacgagctgaagaagatccag
aaggttgtgagttcagattacccagaatgcttagagaaagaggatgaggaggtgctggat
gaagagcagaggatgagcagagaggcatttgtgaagatctcagtgcacttcctgaggaga
atgaagcaggaggagctggctgagcgtctgcagagcagacttcatgctgcagtttgtcag
cgtgaactcaaatccgacctgaagaagaagttccagtgtgtgtttgaggggatcgctaaa
gcaggaaacccaacccttctgaatgagatctacacagagctctacatcacagagggaggg
actgcagaggtcaatgaagaacatgaggtcagacagattgaaacagcatccagaagacca
gccagaccagaaacaaccatcagacaagaagacctcctcaaagcctcagctggaggagag
gaaccaatcagaacagtgatgactaagggagtggctggcattgggaaaacagtcctaaca
cagaagttcactctggactgggctgaagacacagaccaccaggacatacagttcacattt
ccattcaccttcagagagctgaatgtgctgagagagaagaagttcagcttggtaggactt
gttcatcacttcttcagtgaaaccagagcagcaggaatctgcaggtttgagaagttccag
gtcgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacaat
gagatcctgactgacgtcacagagtcggcctcagtggatgtgctcctcacaaacctcatc
agggggaagctgcttccctctgcccgcctctggatcaccacacgacctgcagcagccaat
cagatccctcctgagtgtgttagcatggtgacagaggtcagagggttcactgacccccag
aaggaggagtacttcaggaagaggttcacagatgaggagcaggccagcaggatcatctct
cacatcaagacctcacgaagcctccacatcatgtgccacatcccagtcttctgctgcatc
actgctacagttttggaggaggtgttgaagaccagagagggaggagagctgcccaagacc
ctgactgagatgtacatccacttcctggtggttcagtccaaagtgaagaaggtcaagtac
gatggaggagctgagacggatccacactggagtccaaagagcagaaagatgatcgagtct
ctgggaaaactggccttcgatcagctgcagaaaggcaacctgatcttctatgaatccgac
ctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcactcag
atctttagagaggagagaggactgtaccaggacaatgtgttctgctttgtccatctgagt
gttcaggagtttctggctgctcttcatgtgcatctgaccttcttcagctctggtgtcaat
ctgctgtcagaagaacaaacaacctccctgttgtctaaagtctttagagacaaacctaaa
ccaaagcgtctctaccagagtgctgtggacaaggccttacagagtcctaatggacacctg
gacttgttcctccgcttcctcctgggtctttccctggaggccaatcagactctcttacga
ggtctgcttacacagacaggaagtcgctcaaagaccaatcagagaacagtccagtacatc
aaggagaagatcagtgagaatgtgtctccagagaaaagcatcaatctgtttcactgtctg
aatgaactgaatgacggttctctagtggaggagatccaacagtcccttagatcaggacgt
ctctctacagaagaactttctcctgctcagtggtcagctctggtcttcatcttactgtca
tcagaagaagatccggaggtgtttgacctgaggaaatactctgcttcagaggaggctctt
ctgaggctgctgccagtggtcaaagcctccaacaaagttctactgagtggctgtaacctc
tcagagagaagctgtgacgctctgtcctcagttctcagctcccagtcctgtagtctgaga
gagctcgatctgagcaacaaccacctgcaagattcaggagtgaagctgctgtctgctgga
ttgaagagtccgcactgtgaactggagactctcaggctgtcagactgtctgatcacagag
gaaggctgtgcttctctggcctcagctctgagctccaacccctcccacctgagagagctg
gacctgagctacaatcatccaggagactcaggagtgaagctgctgtctgctggtctggag
gatcctcactggagactggagactctcagggtggagcctgatggagtccgatggttgaca
ccaggtctgaggaagtattcctgtgaactcacaatcgacacaaacacagtaaacaaacac
ctcaaactgtctgacaacaacaggacggtgacatgtgtggaggaggatcaatcacatcct
gatcatccagacagatttgactactgtcttcagctgctgtgtagaactggtctgactggt
cgctgttactgggaggtcgagtggagaggaaaggttgatgtatcagtgagttacagagga
atcaggaggaaaggaaacagtgatgactgttggtttggatacaatgatcagtcctggagt
ctgatctgctctggtaaaggttactctgtccgtcacaatgagacaagaacacccatcacc
tcctccttcttctcctcctcctcctcctcctcctctcatagagtagcagtgtatgtggac
tgtcctgctggctctctgtccttctacagagtctcctctgacacattgatccacctccac
accttcagcaccacattcactgaacctctttatcctgggtttgggttcaggttcagtcct
agttcctcagtgtctctgtgtcctcttcaggagggagagtct
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