Gasterosteus aculeatus (three-spined stickleback): 120815268
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Entry
120815268 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24A-like
KO
K14007
protein transport protein SEC24
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120815268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120815268
Membrane trafficking [BR:
gat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120815268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
120815268
NCBI-ProteinID:
XP_040026190
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MSTAGFNSQNGTGQAYANGPSQNPVAPHQLPGIGYGSTPQPTYDPMQAKAAPPPGPPGPY
PVCSYRPGAPFVSYPPPSGQSMLTRPMMGGPPSHTPPQSASPGPRPPPAQATPPPAVSSS
SYYTNPQQAPAWQYNTAPPPTGAPTSISTPPRGLAPPHVNPTASSPGSSLSSTAYSPAAP
PPHVSHGVTQPPGPGMHRTPLHGYPAPGSAPPSMAPHAYQPNRAPYGPPPTGPPPSMNPA
PPMAHATPPPPKAEAQCGGAANSALPPAEHDCQEGDIECPGSGPQAPSSFNHVDSRMGGP
PQPGPPQPGPPSRHLGGHYPSLPLGYQNAAPPPAAMHPAIQAATQPYTQAPQPYQQPLGG
PGPAQLSPSLAAMSLQSSTPEALRVVNLLQERNLLPPIPIPPPTPCLQQDLQKINCNPEV
FRSTLTSIPQTQSLLNKAKMPLGLLLHPFKDLSQLPVVTSSTIVRCRSCRTYINPFVSFL
DQRRWKCNLCYRVNDVPEEFMYNPVSRSYGEPHKRPEVQNATIEFIAPSEYMLRPPQPAV
YLFHSSTWSHNAVETGYLSVFCQSLLDNIKRTLPGDSRTKIGFVTFDSTIHFYNLQEGLS
QPQMLIVSDIDDIFLPTPDSLLVNLNECKELVQDLLKSLPTLFQKTMETQSALGSALQAA
YKLLLPTGGRMSVFQTQLPNLGVGALQSREDPNQRASAKDVQHLSPATDFYKKLALDCSG
QQVAVDLFLLSSQYCDLASLGCISRYSAGSVYYYPSYHHQHNPAQVECFQRDLKRYLTRK
IGFEAVMRIRCSKGMSIHTFHGNFFVRSTDLLSLPNVNPDAGFAVQMSIEENLDDMQIVS
FQAALLYTSSKGERRIRVHTLCLPVVNSLSDIFAGADVQAITGLLACMAVDRSATASLSD
ARDAMTNAAIDSLASYRQSVLSIQQPGLLAPACLRLFPLFILALLKQKAFRTGTSTRLDD
RLFAMCQLKYQPLVYSMLMIHPALYRVDDLSDEGALNINERTVPQPRVLQLSVEKLSREA
AFLMDAGTVMYLWVGRSCQPAFLTQVLGVSSYAAVPDNLHLLPELDTAESQRTRAFIGWL
RDQRPFFPPLHVIRDESQLKPTFMQNMIEDRTESALSYYEFLLHLQQQISK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcggggtttaactcccagaatgggacaggacaagcatatgcaaatggtccg
tcacagaatccagttgccccccatcagctgccagggatcggctacggctcgaccccccaa
ccgacgtacgatccaatgcaggccaaagctgccccgcctcctggcccacctggaccctac
cccgtctgttcctaccggcccggcgcaccgtttgtttcctacccgcctccctcgggccag
tcgatgctgaccaggcctatgatgggtggtcctccctcccacactcctccacagtccgcc
agcccaggccctaggccgccccctgcacaggccacacctcctcccgccgtgtcttctagt
agctactacacaaacccccaacaggccccagcatggcagtacaacacagctcctccaccg
acgggggctcccacttccattagcacgcctccccgaggcctggcgcccccccacgtaaac
ccaaccgcgagctcgccagggtcgtcattgtcatcaacggcttacagccctgcggcacca
cccccccatgtgtcccatggtgtcacccaaccgccgggccccgggatgcaccgaacccct
ctgcacggataccccgcgccaggttctgcccccccatcaatggctccgcacgcataccag
ccaaaccgagctccctatgggcccccacccaccggcccaccaccatcgatgaatccagca
cccccgatggcccacgcaacacccccaccccccaaggcagaggctcagtgcgggggtgcc
gctaacagcgccctgccccccgctgagcacgactgccaggagggtgacattgaatgtcca
ggatccggcccacaagcaccaagcagcttcaatcatgttgacagcagaatgggcggcccg
cctcagcccggcccgcctcagcccggcccgcccagtcggcacttggggggccactacccc
tccctcccgctcgggtaccagaacgccgcacccccgcccgctgccatgcaccccgccatc
caggccgccacgcagccttacactcaggcccctcagccctaccagcagccacttgggggc
ccaggaccggcccagctcagcccgtccctggcggccatgagcctccagtccagcacccca
gaggccctgagggtggtcaacctgctgcaagagcggaacctgctgccgccgatcccgatc
ccccccccgaccccctgcctccaacaggacctgcagaagatcaactgcaaccccgaggtg
tttcgcagcacgctgaccagcatccctcagacccagtcgctgctcaacaaagccaagatg
cctctgggtctgctgctgcaccccttcaaagacctctcgcagcttcctgtggtgacgtcc
agcaccatcgtcaggtgtcgctcctgcagaacctacatcaacccgtttgtgtccttcctg
gaccagaggaggtggaagtgcaacctgtgctatcgggtcaatgacgttccagaggagttc
atgtacaacccggtcagcagatcgtacggagaacctcacaagagacccgaggttcagaac
gccaccatcgagttcatcgccccctctgaatacatgctgaggccgccgcagcccgctgtc
tacctctttcattcttcgacgtggtcccacaacgcggtggagacaggctacctgagcgtc
ttctgccagtcgctgctggacaacatcaagcgtacgctgcccggggactcgcggacgaag
atcggcttcgtcaccttcgacagcaccatccacttctacaacctccaggagggtctctct
cagcctcagatgctcatcgtgtccgacatcgacgatatctttttaccaacaccagacagc
cttctagtaaacctcaacgaatgcaaagaactggtgcaggacctgctgaagagcctcccc
acgttgttccagaagaccatggagacccagtctgccctgggttcggccctgcaggcggcc
tacaagctgctgctgcccaccggcgggcgcatgtccgtctttcagacccagctgcctaac
ctcggggtgggggcgctgcagtccagagaagaccccaaccagagggcttctgccaaggac
gtccagcacctgtccccagccactgacttctacaagaagctggctctggactgctccgga
cagcaggtggcggtggacctgttcctgctcagctctcagtactgcgacctggcatcgctg
ggctgcatttccaggtactctgcagggagcgtctactactacccctcctaccaccaccag
cataaccccgcccaggtggagtgcttccagagggatctgaagaggtacctgaccaggaag
atcggcttcgaggccgtcatgaggatacgctgcagcaaaggaatgtccatccacaccttc
cacgggaacttctttgtgcgctccacggacctgctgtccctccccaacgtgaatccggac
gccggctttgccgtccaaatgtccatcgaggaaaacctggacgacatgcagatcgtctcc
ttccaggccgcgctgctgtacacatccagcaaaggagagcggaggatccgtgtccacacc
ttgtgtctccctgtggtcaactctctgtcagacatctttgctggagctgatgttcaggcc
atcactggactgctggcttgcatggctgtggaccgctcggcgacggccagcctgagcgat
gccagagacgcgatgaccaacgccgccatcgactcgctggcgtcgtaccgccagtcggtg
ctgagcatccagcagcccggcctgctggcgccggcttgcctccgactcttccccctcttc
atcctcgcgctgctcaaacagaaagccttcaggacgggcaccagcaccaggctggacgac
cgcttgttcgctatgtgtcagctgaagtaccagccgctggtctactccatgctgatgatc
cacccggctctgtaccgcgtggacgacctcagcgacgagggcgctctgaacatcaacgag
cggactgtcccacagccccgggtgctgcagctgtccgtggagaagctcagcagggaggcc
gcgttcctcatggacgccggaacggtgatgtacctgtgggtgggacggagctgccagccg
gccttcctcacgcaggtcctgggagtctccagctacgccgccgtgcccgacaacctgcat
ctgctccccgagctggacacggccgagtcgcagagaaccagagctttcatcggctggctg
agggaccagaggccgttcttccccccgctgcatgtcatcagggacgagagccagctgaag
cccacgttcatgcagaacatgatcgaggaccggacggagtcggccctgtcgtactatgag
ttcctgctccacctccagcagcaaatctccaaataa
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