Gasterosteus aculeatus (three-spined stickleback): 120815441
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Entry
120815441 CDS
T07457
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120815441
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120815441
Spliceosome [BR:
gat03041
]
Complex C
Other components
Complex C specific factors
120815441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
Cas3-like_C_2
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
120815441
NCBI-ProteinID:
XP_040026204
UniProt:
G3N8R5
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MASPLSTMKFWKPGSEAPGISEERELHAESSGSPVIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQLPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLIREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNESGDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLS
RYGMKKHLKVLPMYSGLSFAEQMKVFERTPPSVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPGTPIESLVVTPISKVSASQRAGRPGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGSFGCSKEVVTIAAMMQIQNIFVVPSNQKKAAAREHRKFAVAE
GDHLTMLNVFEAFIKHQRSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILRCIVYGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTA
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcccctctccacgatgaaattttggaagccgggctccgaggctccgggcatc
tcggaggagcgcgagctccacgcggagtccagcggctccccggtcatcttcaacccgcac
acggccctctccatcgagaagcagcggcagaagctcccggtcttcaagcacagaaacaac
atcttgtacctggtggagagcttccagacggtgatcatcgtcggggagacgggatgcggg
aagacgacgcagctgccgcagtacctgctggaggccggctgggctgcagaggggaaggtt
atcggtgtgacacagccccgccgcgtggccgccatctccgtggctaaccgggtagcggag
gagcggggggccctgttgggacacgaggtgggatacaccatccggtttgacgactgctcc
gatccccacgccacgaggattaagttcttgacagacggcatgctgatccgggagatgatg
gccgatcctctcctgaagaagtacagcgtgttgatgctggacgaagcccacgagagaacg
ctgtacacagacatcgccatcggtctgctcaagaagattcagaaaaagcggcgagacctg
aggctgatcgtggcgtctgccactctggatgccaagaaatttcacgacttcttcaacctg
aacgagtccggggaccccaacaaggacacgtgcgggattctgacggtggagggacgcacc
ttcccggtggacgtcttctacaccgtcagccccgtgccggactacgtgaaggccacagtg
gagacggtgctgaagatccacgagacggaggacgacggggacgtgttggcttttctcacc
gggcaggaggaggtggagaaggtggtgtccctcctgcaggagcaggcccggactctgtcg
cggtacggcatgaagaagcacctgaaggttctgcccatgtactcgggtctgtccttcgcc
gagcagatgaaggtgttcgagaggacgccgccgtccgtccgaaaggttgtggtggccacc
aacatagccgagacctccatcaccataaacggggtcgtgttcgtcatcgactgtgcgttc
gtgaagctgcgagcgtacaaccccggcacgcccatcgagtcgctggtggtcacgcccatc
tccaaggtttctgccagccagagggccggcagacccggacgcaaccgccctgggaagtgc
ttcaggctttacacagaggaggactttgagaagctgccggcctcgactgtgccggagatg
cagcgcaccaacctggcccccgtcatcctgcagctcaaagcgttgggcatcgacaacgtg
ctgcggttcagcttcctgtcgccccctccagctcagaccatggtccaggctctggagctg
ctctacgcactgggaggtctggaccattacggacgcctgaccgatcccatgggcgtgcgc
atggccgagttcccgctcagtccgatgttcgccaagatgctcctggagtcggggagcttc
ggctgctccaaagaggtcgtcaccatcgcggcgatgatgcagatacagaatatctttgtg
gttccgtccaatcagaagaaagctgccgcccgagagcacaggaaatttgcagttgccgag
ggagaccacctgaccatgctgaatgtgttcgaggctttcattaagcaccagaggagctcc
cagtggtgtcaggagcacttcctcaactataagggtctgctgcgggcggtgacggtgcgc
gagcagctccgccgcctcatgaacaagttcaaggtgccgcgaacttcaagcgaaggcgac
cccgatgtgatcttgaggtgcattgtttatggtttttttgccaacgcagcccgcatccac
cattccggctcctacaggactttacgagacgaccgtgagcttcacatccacccgaactct
gtgctgttcggagagaaacctccgaagtgggtcgtcttcaacgaagtggtgcagacggca
aagtactacatgcgtgacgtgacggcggtggagtcctcctggttggtcgagttggctccg
cacttctacaagcaggccaagcacggctcgctggccagcaagaggtcccgcgtcctctga
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