Gasterosteus aculeatus (three-spined stickleback): 120815694
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Entry
120815694 CDS
T07457
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120815694
Enzymes [BR:
gat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
120815694
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
120815694
Prokaryotic type
120815694
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
120815694
NCBI-ProteinID:
XP_040026518
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Position
III:complement(9329582..9334409)
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AA seq
548 aa
AA seq
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MLLWVCRSATLSSDARRLLGLAVPGARGPASPLSRRVVMSAVKRKATSAAATEPAAKQQK
KKGEKNHEGAGAAGWLKDHLKQLRKDNKDMKFNQKRLRFISDAKSMKQGSEGVLYWMLRD
HRVQDNWAMVHAQQLALREKLPLHVCVCLLVPQSELSTLRHYSFMLKGLEEVAKECKALD
IQFHLLHGSAGEVLPGFVAEHSLGAVVTDFSPLREPLQWLEEVKATLPSEIPLIQVDAHN
IVPCWVTSPKLEYAARTIRGKITKLLPEFLTEFPLVEKHSYAATTTAKPVDWDKTLASLQ
VDRAVGDTEWAQPGTKGGLAMLESFIDVRLKLFDTKRNDPNAAALSQLSPWIRFGHLSAQ
RVATQVQSSGKSAGHSVASFIEELVVRRELTDNFCFYNKKYDSIQGAYEWAQKTLKDHAK
DERPYLYARERLEKAETHDKLWNGAQYQMVTEGKMHGFLRMYWAKKILEWTSSPEEALSI
ALYLNDRYSLDGQDPNGFVGCMWSICGIHDQGWKEREVFGKIRYMNYKGCLRKFDVAAFE
RKYRPKSH
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctgggtttgcaggagcgcaactctctcgtctgacgcgaggcggttgttgggg
ctcgctgtccccggtgctcgcggacccgcttcaccgctctcccgtcgagtcgtcatgtcg
gcggtaaaacgcaaggcgacgtcggccgccgccaccgagcccgccgccaagcagcagaag
aagaagggagagaagaaccacgagggcgctggagctgcgggctggctgaaggaccacctg
aagcagctccgaaaggacaacaaggacatgaaattcaaccaaaaacgcctccgctttata
tctgacgctaaatcgatgaagcagggctccgagggtgtcctgtactggatgctgagagac
caccgggtacaagataattgggcgatggtccatgcccagcagcttgccttgagggagaag
cttcctctgcacgtctgtgtctgcctgcttgtcccacaatccgaactgtccactctgaga
cattacagcttcatgttgaaaggcctggaagaagtggcaaaggaatgcaaagctttggac
atccagttccacctgctgcatggttcggccggggaggttctgccgggctttgttgctgag
cacagcctgggagcagtggtgacagacttctcccccctccgagagcctttgcagtggttg
gaggaggttaaagcgactctcccaagcgaaatcccccttatacaggttgatgcacataat
attgtcccctgctgggtcacatcacccaagctcgagtatgccgccaggacgatcagaggg
aaaatcacaaagctgttgccagagtttctcacagagtttcctctggtagagaaacactcc
tacgcagctacaacaactgccaaaccagtagattgggacaaaaccctggcctcgctgcag
gtggaccgagcagtaggagacactgagtgggcccagccaggcaccaagggggggttggcc
atgttggagtccttcattgatgttcgcctgaaactgtttgacaccaaacgcaacgaccca
aacgccgctgccctcagccagttgtccccctggatccgctttggccacctgtcagcccag
cgtgtggcgacgcaagttcagagcagtgggaagtctgcaggtcactccgtcgcctccttc
atcgaggagctggtggtgcgcagagagctgactgacaacttctgcttctacaacaagaaa
tatgacagcatccagggtgcgtacgagtgggctcaaaagacgttgaaagaccacgctaaa
gacgagaggccgtacctctacgcgcgcgagcggctggagaaagccgagacgcacgacaag
ctgtggaacggtgctcagtaccagatggtcactgaggggaagatgcacggtttcttgagg
atgtactgggccaaaaagatcctcgagtggacgtcctcaccggaggaagcgctctcaatc
gctctgtacctaaacgatcgctactctctggatggccaggatcccaatggcttcgtcggt
tgcatgtggtccatttgtggcatccatgaccagggctggaaagagagagaggttttcggg
aagatccgctacatgaactacaaaggctgcctgcggaagtttgacgtggccgcgttcgag
agaaagtaccgtcccaagagccactga
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