KEGG   Gasterosteus aculeatus (three-spined stickleback): 120815761
Entry
120815761         CDS       T07457                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120815761 (kdm4ab)
Enzymes [BR:gat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     120815761 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     120815761 (kdm4ab)
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120815761 (kdm4ab)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN zf-HC5HC2H PHD_2 PHD Tudor_5 DUF7141 Rad9_Rad53_bind 53-BP1_Tudor DUF4537
Other DBs
NCBI-GeneID: 120815761
NCBI-ProteinID: XP_040026633
LinkDB
Position
III:8617233..8629716
AA seq 1175 aa
MASGVISQNNGSKGIMTFYPTPEEFKNFSRYIAYVESQGAHKAGLAKIVPPKEWKPRSSY
DDIDDLVIPAPIQQVVTGQSGLFTQYNIQKKSMTVREFRKIANSDKFCSPHYDDFEELER
KYWKNVTFNPPIYGADVNGSLYDPDVKDWNICHLDTILDTVEHESGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYCVPPEHGKRLERLAKGFFPGSSQNCEAFLR
HKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYAYHAGFNHGFNCAESTNFATERWIEY
GKQAVLCSCRRDMVKISMDVFVKKFQPDRYEQWLAGRDVLPIDHRRPTPEAKEFLGESSN
DTATCGDDGERKSTQRIETKRHRVCLEVPDEVVPKDEDEDGAEQYGKRPRLILIPPRTTA
QDGKRNKGPPKLVVTPSKLTLLDPFHRSLTQNNGDVGRPPHYTKTRAPAISSQSQPGNRY
LSVSATPSWTEATAQPARKMGVASLLFHKTLSSKDALQVQSYTMEKQQQQHSHTQLQVHS
YAREHQPRQLQHKSCTSSHAQVQPSPQTESKTNLAIEAPYESQAEGLVEPGRKEDKPKAT
SPAEAQAEVRKPEVEPTSNSAAVWTEKHLEETSKTVMDTSKNSKQKSLCPVQSNQSLLVD
GGIVVLNETIPTEKPICDEVEVIPRNHQVSEEQSYCMSVVEKQQPQAQLCTLPRHHPLIR
EAHSDNEEFMDEEFEQEEKEEWAKPLTQLWQCRPYNPEVEREYNKSLGQQAPYCSICLLF
YTYHQSESSSGSSSVTLVNRPGGRQWSKPLIPEMCFNTQSSRSNDNGEGQLSNPHVAEDG
TSRLVSCAQCCVRVHTSCYGVPEDEGELDDWLCTRCEADATTEDCCLCSLRGGALQRANN
DKWVHVLCAITVLEARFVSVTERGPVDLSAIPLPRFKLKCAYCRKRMKREVKGCCVQCSH
GRCSTAFHPTCAQAAGMIMNPDDWPFTVFITCHRHKAPGIPERNKASMRELAVGQRVICK
HKNGRYYHSEVVELTTATFYEVVFDDGSYSNNLFPEDIQNRDCVRLGPPTEGDAVQVRWT
DGLIYGAKFLVSHSIPMYLVEFEDGSQITVKREDIYTLDENLPKRVKSRMSVASDMRFEL
FSQSNVKQNSKRQRVINSRYREDYIEPVIYRAIME
NT seq 3528 nt   +upstreamnt  +downstreamnt
atggcgtcgggtgtgatttcccaaaacaatggttccaaggggatcatgactttttacccc
accccagaggaattcaagaacttcagccgctacattgcatatgtggagtcccaaggagca
cacaaagcaggcctggcaaaaatcgttccaccaaaggaatggaaacccagaagctcttat
gatgacatagacgatttggtgatccccgcacccattcagcaggtcgtgacgggccagtcg
ggccttttcacacaatacaacattcagaagaagtccatgaccgtgagagagtttcgcaag
attgccaacagtgacaagttctgtagtccacattatgatgactttgaagagctggaaaga
aagtattggaagaacgtgacatttaaccctcccatatacggggccgatgtgaatggatct
ctatatgaccctgatgtcaaagactggaacatttgccacctggacactatcttggatact
gtggaacatgaaagcgggatcactattgagggggttaatacaccctacttgtattttggc
atgtggaagaccacctttgcatggcacactgaggacatggacctctacagtatcaactac
ttacactttggagagcccaaatcgtggtactgtgttcctccagagcatgggaaacgattg
gagcgcttggctaaagggttctttcctggtagttcccagaattgtgaggcttttttaagg
cacaagatgactctcatctctccctctatacttaagaagtatggcattccgtttgaaaag
attactcaggaggccggggagttcatggtaaccttcccctatgcctatcacgctgggttc
aaccacggtttcaactgcgcagaatccaccaacttcgccaccgagcgatggatcgagtac
gggaagcaagctgttttgtgctcatgtcgcagagacatggttaaaatttctatggatgta
tttgtgaagaagttccagccagatcgctatgagcagtggctggcagggcgcgatgtgttg
cctattgaccacagacggcccaccccagaggcgaaggagttcctgggggagtcctccaat
gacacggcgacttgtggggatgatggcgagcgaaagagcacacaaaggatagagacaaag
agacacagagtctgcttggaggtgcccgacgaggttgttcccaaagatgaagatgaggac
ggtgcggagcagtatgggaagcgtcccaggctaatcctcatacctccacgtactacggca
caagatggcaagagaaataaaggcccgccaaagttggttgtaacaccaagcaagctcacc
ctattggatccatttcacaggagcctaacccaaaataacggcgacgtaggccgccctcca
cattacaccaagacacgcgcacctgccatctcctctcagtcccagcccggaaaccgctat
ttatccgtttcagcaacaccgtcctggaccgaagccactgctcagcctgcccgcaaaatg
ggggtggccagcctgctcttccacaaaactttgagttcaaaagacgctcttcaggtgcag
agttacactatggagaagcagcagcagcagcattctcacacacagctgcaggtgcacagc
tatgcccgagagcatcaaccccgtcagctgcagcacaaaagctgtacctcatcacacgca
caggttcagccatcgccacagacagaatccaagaccaacctcgccatcgaagcaccatat
gagtcgcaggcagagggtctcgtggagccgggccgaaaggaggacaaaccgaaagcgaca
tcgcccgcggaggctcaagctgaagtaaggaagccagaagttgagcccacgagcaactct
gctgccgtgtggacagaaaagcatctcgaggagacgagcaaaacggtgatggacacctcc
aagaacagcaagcaaaagtcattgtgccctgtacagagtaaccagtccctgcttgtggat
ggtggcattgtcgtcctgaatgagaccattcctaccgagaaaccaatctgtgatgaggtg
gaggtgatccctcgcaaccaccaggtgtcagaagagcagtcctactgcatgtccgtggtg
gagaagcagcagccgcaggcccagctgtgcacgctgcctcgccaccaccctctaatcagg
gaggcacacagtgacaacgaagagttcatggatgaggagtttgagcaagaggagaaagag
gagtgggcgaagccgttaacccagctgtggcagtgtcgcccatacaaccctgaggtagag
cgggagtacaacaagagcctgggccagcaggccccctactgctccatctgcctgctcttc
tacacctaccatcagtctgaatccagtagtgggagttccagcgtgacgttggtgaaccgt
ccaggcggacgccagtggtccaagccactcatccctgaaatgtgtttcaacacccaatcc
agcaggtcgaatgacaacggcgaggggcagctgtctaaccctcatgtagcagaggacggg
accagccggctggtcagctgtgctcagtgctgcgtccgcgtacatacaagttgctacggg
gtacctgaggatgaaggtgaacttgacgactggctgtgcacccgttgtgaggctgacgcc
accacagaggactgctgtctgtgttccttgcggggcggagctctgcagagagcgaacaat
gacaagtgggttcatgtgctgtgtgccatcactgtgctggaagctcgctttgtgagcgtt
actgagcgaggcccagtggacctctctgcaatcccactgcctcggttcaaactgaagtgt
gcatactgcaggaaacggatgaagagggaggtgaagggctgctgtgtccagtgctcccac
gggcgctgctccactgcatttcaccccacctgcgctcaggcagcaggaatgatcatgaac
ccggatgactggccgttcacagtctttatcacctgccacagacacaaagcgcccggcata
ccagagcgcaacaaggcgtcgatgcgtgagctggcagtcgggcagagggtgatctgcaaa
cacaaaaatggccggtactaccacagcgaggtggtggagctgaccacagccaccttctac
gaggtcgtgttcgacgacggctcctacagcaacaacctgttcccggaggacattcagaac
cgggactgcgtccggctcggtccccccactgaaggcgatgcagttcaagtgcgatggaca
gacgggttgatctatggagccaagtttttggtgtctcactcgatccccatgtacctggtt
gagtttgaggatggatcccaaatcactgtcaagcgagaagacatctacactctagatgag
aaccttcccaagcgggtcaagtcccgaatgtcggtggcgtcagacatgcgctttgagctc
ttctctcagagcaacgtcaaacagaactccaaaaggcaacgggtcatcaactctcggtac
agggaggactacatcgagccggtcatttaccgagccatcatggagtga

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