Gasterosteus aculeatus (three-spined stickleback): 120815762
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Entry
120815762 CDS
T07457
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04136
Autophagy - other
gat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120815762 (atg13)
04136 Autophagy - other
120815762 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120815762 (atg13)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120815762 (atg13)
Membrane trafficking [BR:
gat04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120815762 (atg13)
Atg1 complex
120815762 (atg13)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120815762 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120815762
NCBI-ProteinID:
XP_040026640
LinkDB
All DBs
Position
I:25092238..25097935
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AA seq
533 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRAGVVGTPV
GTVTLSCAYRTNLAFMSNRSLTRYMQFERSAPIMGIIVDHFVDPPGSGPRTANMGHPCNY
RAPDDDDGGPYAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLPLPLAPG
LVTHTLYASRLSYHPQAGAAELGHPAANQGLHAGKEHGGVASNPAQPAHGADAHLAAENV
ANTPGENGGRRRDEQPSPSDPLESLNAFTRKIGAFVNKPNAPIQTAAGLDLPFAAFAPRG
LDSEDSDPMVQPPDSPTCPSPLQASLHSQDSEGSGPQDDFVMVDFRPAFSKDDLLPMDLG
TFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaagacttggacaagttcattaagttcttc
gccttgaagacagtccaggtgattgtccaagctcgtcttggagagaagatctgcactcgc
tcgtcttcatcgcctactggttctgattggtttaatttggccatcaaagacatcccagag
gtgactcatgaagccaagaaagctttggccggccaacttcccggcatcgggcgctccatg
tgtgtcgagatctccctcaagacgtcagagggtgactcaatggagttggagacttggtgc
ctggaaatgaatgaaaagtgcgataaagacatcaaggtgtcctatacagtctacaaccgt
ctgtctgtcctgctcaagtctctgctggccatcaccagagtaacgcctgcctacaagcta
tccagaaagcagggtcacgactacgtcatattataccggatttacttcggggaagtccag
ctgagtggattaggagaaggttttcagaccgtgcgcgccggcgtggtcggcaccccggtc
ggcacggtcacgctttcatgcgcctaccgcaccaacctggccttcatgtccaacaggtca
ctgacacgctacatgcagtttgagcgctcggctccgatcatggggatcatcgtggatcac
tttgtggatcctcccggcagcggcccgcgcaccgccaacatgggacatccctgcaactac
agagccccggatgatgacgacggaggaccatacgcgggggttcaggattcacaggaggtc
tgcaccacctccttctccacctcccccccctcacagtgtgtgtgcacgctgagtccttcg
ccctctaaactgtctaagcccctcccgctggacagtctgccgcttcctctggctccggga
cttgtcactcacactctttacgcctccagattatcgtatcatcctcaagcaggagctgct
gagctcggtcaccctgctgcaaaccaggggctgcatgctgggaaggagcacggaggggtc
gcgtcgaaccccgcccaacccgctcacggcgccgacgcgcatctggcggcggagaacgtc
gccaacacgccgggcgagaacggcggccgcaggcgggacgagcagccctccccctccgac
ccgttggagtctctgaacgccttcaccaggaagatcggagccttcgtcaataaacccaac
gcgccgatacaaacagcagccggtctggacctgccatttgctgcgttcgctcctcgaggc
ctggactcggaggacagtgatcccatggtgcagcctccagactcccccacttgcccctca
cccctgcaggccagcctccattctcaagactccgagggatcgggaccgcaggacgacttt
gtcatggtcgactttcgtccggccttctctaaagacgacctgctgccgatggatctgggc
accttctacagagagtttcaaaaccccccccagctagccagcctctcgctgcacatcagc
tcccagtccatggccgacgacctggactcactgccagagaaacttgctgtctatgagaaa
aatatcgacgagtttgacgcttttgtggacatgctccaatag
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