Gasterosteus aculeatus (three-spined stickleback): 120815834
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Entry
120815834 CDS
T07457
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120815834
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120815834
Transporters [BR:
gat02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120815834
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120815834
NCBI-ProteinID:
XP_040026785
UniProt:
A0AAQ4P952
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Position
3:15007823..15011943
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AA seq
618 aa
AA seq
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MGIQSCPYVTVDSKRRSVCSSSGFQLTADKVPDLSMNRQRRKKENQKRAGDRGQWANKTE
YILVVAGNVVGLGNVWRFPYLCYKNGGGAFLVPYGLFAMVCGIPLFLLESSVGQYTQEGF
VTSWRKLCPLAQGIGYGQAVVKLYDFSFIIIEAWALFYLVFSFSAQAPWATCENSWNTAN
CMGLHGNDSSSSNWTANLTMLKKHTSAATEFWERRVLGMSAGIEDLGSVRWELALCLLAC
WVFCYFSIWKGVKSSGKVVYFTATFPYVMLLILLIRGFTLPGAWEGIYYYLYPDLNRLAN
LEVWIEAGSQIFFSYSLTAGTLIVLGSYNEYSNNCYKDCFWLSLLNSGTSFVAGFVVFSV
LGFMAQKQGVTVDTVVESGPGLAFIAYPQATAMMPLPQFWTFCFFLMLILLTVDSHFVAV
ECFITSIGDLFPKLFRKAGRHEMLVLFICCSFYLLHLLMVTEGGVYVFHLIDYYGMTRAC
HYFMALSECLALAWTFGADRLMDVIEDMTGQRPSGFFKLCWKYIIPLLSLIALILYLLDY
KHLRIYQYVYPDWAYALGWTMTLSSVVMVPLWAAGQMCFTAGTIRQRLSVLCRPAEDLTW
TNGEAETAVELNTSAGTT
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggcatccagtcatgtccttacgtgacggtagacagtaaaagaagatccgtttgcagt
tcttctggatttcaactcacggctgacaaagtccccgatctttcgatgaacagacaaaga
agaaaaaaggagaatcagaagagggccggagacagaggacagtgggccaacaaaacagaa
tacatcctggttgtcgctggaaatgtggtcggcctgggcaacgtgtggagatttccatac
ctctgctacaagaatggtggaggggcctttctggtgccgtatggtctgttcgctatggtg
tgtgggattcctctgttcctactggagagctccgttggtcagtacacccaggaaggattc
gtcacctcctggaggaaattatgtccgctggcccaaggaattggatatggacaagcagtg
gtgaaactgtacgacttcagcttcattattatagaagcctgggctctcttttacttggtg
ttctcgtttagcgcccaggcgccgtgggccacctgcgagaactcatggaacacagcgaac
tgcatgggccttcatgggaatgattcttcctcatcaaactggacagcgaatctgaccatg
ctgaaaaaacacacctctgctgctactgagttctgggagcggcgggtgttgggtatgtct
gccggcatcgaggatctgggcagcgtgaggtgggagctggctttgtgtcttctggcctgc
tgggtcttctgctacttcagcatctggaaaggtgtcaaatcttctggaaaggtagtgtac
ttcacagccacgttcccctatgtgatgcttctgatactgctcatcaggggtttcaccctc
cctggagcttgggaagggatctactactacctgtatccagacctgaaccgcctggcaaat
cttgaggtctggatagaagcaggatctcaaatattcttctcctacagtctgactgcaggg
actctgattgtgctgggaagctacaatgagtacagcaacaactgttataaggactgcttc
tggctcagtctcctcaacagtgggaccagtttcgttgctggatttgtcgtcttctccgtc
ctcggcttcatggctcagaaacagggcgttaccgtggacaccgtggtggagtcgggtccg
ggtttggccttcattgcttacccgcaggcgacagctatgatgcctctcccccagttctgg
accttctgtttcttcctgatgctcattctgctcactgttgactcacacttcgtggcagtg
gagtgtttcatcacctcgataggcgacttgttccccaagctgttccgtaaagcaggaaga
cacgagatgctcgtcctcttcatctgctgctccttctacctcctacatctgctgatggtc
actgagggaggggtttacgtgttccacctcatcgattactatggcatgaccagggcgtgt
cactacttcatggctttatccgagtgtctggctctggcctggacctttggtgcggatcgt
ttaatggacgtcattgaggacatgacaggacagcggccgtctggcttcttcaaactctgc
tggaaatacatcattcctctgctctccctgattgccttaatcctgtacctgctggattat
aaacacctcaggatctaccagtacgtttacccggactgggcctacgcactgggatggacc
atgacgctctcctcggtcgtcatggtgccgctgtgggcagctggacagatgtgcttcaca
gccggaaccatccgacagcgcttgtctgttctctgtcgtcctgctgaagatctgacttgg
accaacggagaagcagaaacagccgttgaactgaacacgtcagcagggacgacctag
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