Gasterosteus aculeatus (three-spined stickleback): 120815904
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Entry
120815904 CDS
T07457
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120815904 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gat01009
]
120815904 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120815904 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120815904 (rb1cc1)
Protein phosphatases and associated proteins [BR:
gat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120815904 (rb1cc1)
Membrane trafficking [BR:
gat04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120815904 (rb1cc1)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120815904 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
DUF1258
Motif
Other DBs
NCBI-GeneID:
120815904
NCBI-ProteinID:
XP_040026926
LinkDB
All DBs
Position
3:complement(16780751..16792710)
Genome browser
AA seq
1622 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVATKLCSFCERLLHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDSSYVTYPH
DLEEIKVKLSKLGTSVSVMARIPLLECLTRHCYKESMEKSSSTPGKDSDETEEEKSTDSV
LCAADTQRPSKSSAPFPAPGMTTSEPSGDQETNEMTDSGGLRAALLDDEDDAPEFTNPSC
FNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTDCRDTIAKLDNQNMKAIK
GLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIM
LNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERV
RVVEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKGLYEAEKFKRESFGKLFR
KSFLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPVEVQPFLMVPTM
CDLTPLNRHVETLHKLVQAAQSVDEMSQTITDLLNEQRTSFSQRSTVLTPQSESITGTMT
SRSSKTPPSLSLQSPSSQPLHVPAPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLHQGSL
DLDSLAESPESDFMSAVNEFVIEEHLASPNPISEPISPEMMVESLYSSVINAIDNKRMQD
TTILERENSRITVLKQVIDKYQSAAEESHSNFRSVKDDLHHLRGMVLKEQHDFGFVLRNL
TTEVSNVVDNICQTQKSELTEQHQSELLSLRQPLETQVQTLTEENQVNQNIVKDVQRAML
ELEGLMERKEKELTQLENEKERWAQTESDQLERIKTLEQVMGEQSQEIKALSLSRDSLTS
QLENLHFEIERGQQKIRQELELVEQSHLMEMEEKLKQEHAAKLETVNQDNRRAAEHLAAE
NSAKLSEAAEHHAAALKEKESQIKDMEARITELAELRCKVEVELALKESEAEEVRLLFEE
AQMQQAEAVESLVEAATKVLSQELADVKKQLDVKNEECEVDLAELRSLMRIEKDNCISEL
VDTHEEEATSLRNQLASLQRLAQNADENHADQQQKVEQAFDLQVAALKEEQEKQLRSSQE
LESELRTVISQLQADNDLLSKKVEQDRQATERDSEEEAASKVASADAFKALEQQKEDVET
RLLDRIRQLEEELHGRQSSKSDEGLSLHAEGRADAAAPLSLDSALQERLQQERASLQSQM
DLLEKRKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEHIINELTEKWRAVTQQQEKDKA
LIETLSEDRASVMQEKKHLEEELNRLRGAALISSAFFAPNPSALEVSPAGAAARAPLPLA
GPFPSDPGPETDRLASVAAIRDDEQVDSAVEASLVTVHDSTPMSEEKQRILLLERTLHMK
EEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYF
LHSESLSALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNR
KV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgatactgatctt
gctgtccagactgttctggagcttaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgttaatggaggggaatgtatggctgcagagaggcgtgtctgc
agctacagtgctggcactgaaacaaaccccatattcctgttcaacaaagagatgatcctg
tgtgaccgggatcccacgatccccaaaaccaccttctctattgagagtgagatccaggtt
aaagtagaggagtctctactgatgcctgctgtctttcacactgttgcctcgcgaacacaa
cttgctctggaaatgtttgaagttgccacaaaactttgctctttctgtgaacgattgctt
catgatgaacacctgcaacaccaaggctgggctgccataatggccaatctggacgactgc
actctctcttatcaaaagttgcttatgaaatttgattcttcgtatgtaacctatccacac
gacttggaggaaattaaagttaaactctccaagctaggaacatcagtttctgtaatggcg
aggattcctctgctggaatgtttgacaagacactgttacaaagagagcatggagaagtca
agctcaaccccaggaaaagattcagatgagacggaagaagaaaagtccaccgactctgtg
ctctgcgctgctgacacacagaggccctccaagtcatctgcacccttccccgctccgggg
atgaccacatctgaaccatctggcgaccaggaaaccaatgaaatgactgacagtggtggg
ctgagagctgcactgctggatgatgaggatgatgctccggagttcaccaacccgtcctgc
ttcaatgtcacactactggactggatcaacgtgcaagaccgacccaacgatgtggaatcg
gtcgtgaggaaatgctttgactccatcaataggctcgaccctcggatcattcaacccttc
ctgacagattgtcgtgacacaattgccaagctagataatcaaaacatgaaagccatcaag
gggcttgaggaccggttgtatgctctagaccaaatgattgcgagctgtaagaagctggtg
aatgagcagaaagaacttgctcagggatttctggccaatcagaagcgggctgaaaacctg
aaggacacatctgtcctgccagatttgtgtttgagtcacaccaaccagctgatgatcatg
ctgaacaaccacaggaagctgttggacatcaagaagaaatgcaccactgccaaacaagaa
ctcgcaaacaaccttcaagtcagacttaaatggtgctgctacgtgatgcttcatgcagac
caggacggggagaagcttcaggctctactccgacttctgacggagctaatagaaagagtg
agggtggtggaggccctcagcaccgtgccacagatgtactgcttggctgtggtggaggtc
gtgaggcgaaagatgtttatgcgccactacagagagtgggcttatgcacttgtgaaggac
gggaaaggactgtacgaggcggagaagttcaaaagggaatcctttgggaaactcttcagg
aagtctttcctcagaaatcgtttgttccgaggactcgattcatggcctccaacctccttt
tgtacacggaagcccagaaggtttgatgacgaacttccagacatctcacttgatgacctg
cagtacttgaaatcttgttgtcctgtcgaggtgcagcctttcctcatggttcccacaatg
tgcgacttaacgcccttaaatcgccacgtagagacgcttcacaagctggtccaagctgca
cagagtgtggatgagatgtctcaaactattactgacctgctgaatgaacaaaggacctcc
ttcagtcagagatcaacggtgttgactcctcagtctgaaagcataaccgggaccatgaca
tcaaggtcctccaaaacgccgccttctctcagcctgcagagccccagcagccagccactg
catgttcccgcccccgcgccgctggaggacttgtccccggacagcatagacgcacaaacg
tttgactttgaaaccattggccacccgaacatggatccggtgctgcaccagggctccctg
gacctggattctctagcagagagccccgaatccgacttcatgtccgctgtcaacgagttt
gtgattgaggagcacttggcctctccgaaccccatcagcgaacccattagccccgaaatg
atggtggagtcgctgtattcctccgtcattaacgctatcgacaacaagcgcatgcaggac
accacaatacttgagagggagaactcgaggatcactgtgctaaaacaagtgattgacaag
taccaatccgctgcggaggagtcccactcaaacttcagaagcgtgaaggatgatctccat
cacttgaggggcatggttttaaaagaacaacacgactttggtttcgttttgagaaatctg
accacagaggtgagcaacgtcgtggacaacatctgccagacccagaaatctgagctgacg
gagcagcatcagagcgagcttctctcccttcggcagccgctggagacgcaggttcagacg
ctgacggaggaaaaccaagtaaaccagaacattgtcaaagatgtccagcgcgcaatgctg
gagctggaggggctgatggagcgcaaagagaaagaactcactcagctcgagaacgagaaa
gagcgatgggcccagacggaaagtgaccagctggaaaggatcaaaaccctggagcaggtg
atgggcgagcaaagccaagagatcaaggcgctctcgctctcgagggactctctgaccagc
cagctggagaatctgcactttgagattgaacgtggccagcagaagatccggcaggagttg
gagcttgtggaacagtctcacttgatggagatggaggaaaagctcaagcaggaacatgca
gcgaaactggagaccgttaaccaggataaccggagggccgcggaacatctggctgctgaa
aatagcgcaaagttaagcgaggccgccgaacaccacgccgctgcacttaaagagaaggaa
agccaaattaaggacatggaggctcgtattactgagcttgcagaactccgctgcaaagta
gaggtggagttagccctcaaagagtccgaggcagaggaggtgaggctcttatttgaggag
gcccagatgcagcaggccgaggctgtggagtccctggtggaggcagcgaccaaagtcctc
agccaagagctggcggatgtcaaaaaacagctcgatgtgaagaacgaggagtgtgaagtg
gacctggcagagctgaggagtctcatgaggatcgagaaggacaactgcatctcggagctg
gtggacacacacgaggaggaggccacttccctgcggaaccagctcgcctccctgcagcgg
ctggcccagaatgccgatgagaaccacgccgaccagcagcagaaagtcgagcaggctttc
gaccttcaagtggctgctctaaaggaagagcaagagaagcagctccggagttcccaggaa
ctggagtccgaattgaggactgttatcagccaactgcaggcagataacgacctgctctcc
aagaaagtagagcaggaccgacaagcgacggagagagattcagaagaagaggcggcctct
aaggttgcgtcggcagacgcttttaaagcgttggagcagcagaaggaggacgtggagacg
aggctgttggacagaataagacaacttgaggaggagcttcacgggagacaatcctcaaaa
agtgatgaagggctgtcgctgcatgccgaggggcgtgccgacgccgcagcgccgctgtct
ctagactcggcactgcaggagcggctgcagcaggagagggccagcctgcagtcccagatg
gacctcctggagaaaaggaagaacgaggagatgcagaacctcaagacgtcgctaatcgca
gagcagcagactaatttcaacactgttctaacccgagagaagctgaagaaagagcacatc
atcaacgagctgacagagaagtggcgggcagttacccagcagcaggagaaggacaaagcg
ctgatcgagactctctccgaggaccgagccagcgtcatgcaggagaagaaacacttggag
gaggagctgaaccggctgcgcggcgccgccctgatctcgtctgccttcttcgctccgaac
ccctcggctctggaggtctcgccggccggggcggcggcccgggcgccgctgccgctagcc
gggccttttccctccgaccccgggcctgaaaccgacaggctggcctccgtggcggccatt
cgagatgacgagcaggtggactcggcggtggaagccagcctggtgactgtccatgacagc
accccgatgtcggaggagaagcagcggatactcctcctcgagaggactttacacatgaag
gaagaagaaaacaagcggctcagtcaaagactgatgtctcagagcatgtcgtctgtgtcg
tcacggcattcagacaaaatcgccatcagagatttccaggtaggcgatttggttctaatc
atcctggatgaaaggcacgacaattacgtgctgttcacagtcggccccaccctctacttc
ctgcactcagagtctctctctgcactggacctcaaaccagcatcagggacgtcaagacgg
ccgtgggtacttggaaaggtgatggagaaggaatattgtcaggcaaaaaaggcacagaac
aggttcaaggttcctttaggaaccaagttctacagagtgaaagctgttccatggaacaga
aaagtatga
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integrated database retrieval system
