KEGG   Gasterosteus aculeatus (three-spined stickleback): 120815987
Entry
120815987         CDS       T07457                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120815987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gat03400]
    120815987
DNA repair and recombination proteins [BR:gat03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     120815987
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WD_LRWD1 Beta-prop_IP5PC_F Beta-prop_Vps41 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 120815987
NCBI-ProteinID: XP_040027085
LinkDB
Position
III:173861..180534
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWTLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEDENEGIHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtgtcttatgtc
attcgggatgaggtggagaagtacaatcggaatggggtgaacgcactgcagctggaccca
gcgctgaaccgcctcttcaccgctgggagagactccatcatccggatatggagtgtctac
cagcataaacaggacccatacatcgcctcgatggagcatcataccgactgggttaatgac
atagttctctgttgcaatggcaaaacgctgatatcggcctcgtcagatacaacagtcaaa
gtatggaacgcgcataagggcttctgtatgtcaacgttacgaacacacaaggactacgtg
aaagctctggcatacgctaaggacaaggagctcgtggcgtcagcaggtctcgaccggcag
atctttctttgggatgtgaacacgctaacggccctcaccgcttccaacaacaccgtaacc
acctcttcactcagtgggaacaaggactccatctacagtctggctatgaaccagatgggt
acagtcattgtatctggatccacagaaaaggtcctgagagtgtgggatcctcgaacatgc
gctaaactgatgaagctaaaaggccacacggacaacgtgaagtcgttgctgctgaatcgt
gacggcactcaatgcctgtccggcagctccgacgggaccatccgcctgtggaccctcggc
cagcagaggtgcatcgccacgtaccgggtgcacgatgaaggcgtctgggccctgcaggtc
aacgaggccttcacacacgtctactctggaggccgagacaagaagatctactgcaccgac
ctccgcaacccagacatccgtgtgctgatctgcgaagagaaggccccagtgctcaaaatg
gaactggacagatctgctgacccacctccagcaatctgggtctccaccaccaagtcatcc
gttaataaatggtctctgaagggaatgcacaacttccggtcatcaggggagtacgacaac
gactgcactacccctctgacgccgctgtgcactcagccagaacaagtcatcaagggaggc
gccagtatcatacagtgccacattctgaacgacaagagacacatactcaccaaagatacc
aacaacaacgtggccttctgggacgtcctgaaggcttgcaagggtgaagacttggggaag
gtggagttcgatgaagagattaaaaagcgcttcaagatggtctacgtaccaaactggttc
tctgtcgatcttaaaactgggatgctcaccatcacgttggacgagagcgactgcttcgct
gcctgggtgtctgcaaaggacgctggcttttcaagctccgatggatccgacccgaagctg
aacctcggtggactgctgctccaggctctgctggagttctggcccaggactcgcatcaac
cccatggacgaggacgagaacgaggggatccacgtgaacggagagcaggagaaccgggtc
cagaagggaaacgggtatttccaagtgccgccacacacgcccgtcatctttggggaagca
ggaggcagaactttattcaggttgctatgtagagattcaggtggagagactgagtcgatg
ctgctgaacgagacggtgccgcagtgggtcattgatataactgtagataaaaatatgccc
aagttcaacaaaatcccgttctacctccagccccattcttcctccggcgcgaagacgctg
aagaaggatcgcctctcggccagtgacatgctccaggtgaggaaggtgatggagcatgtc
tacgagaagatcatcaacctggacaacgagtcgcagaccaccagctcctcggccaacgac
aagccgggggagcaggagaaggaggaggacatggccatgctggcagaggagaagattgaa
ctaatgtgtcaagaccaggttctggatcccaacatggacctgcgaacagttaaacatttc
atctggaagagcgggggagacttgacgcttcactataggcagaagtccacgtga

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