Gasterosteus aculeatus (three-spined stickleback): 120816000
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Entry
120816000 CDS
T07457
Symbol
cntnap2b
Name
(RefSeq) contactin-associated protein-like 2b
KO
K07380
contactin associated protein-like 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120816000 (cntnap2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120816000 (cntnap2b)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
120816000 (cntnap2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
COLFI
hEGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
120816000
NCBI-ProteinID:
XP_040027121
UniProt:
A0AAQ4RA79
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Position
III:5100478..5125828
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AA seq
1316 aa
AA seq
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MSSVTRLLLLPAALCSITSPSSAASSASRKCEDSLATPLPYSFFTSSSAYARGHGAGYAK
LNRQQGAGGWSPLDTDRYPWLQVNLGSRKQVVAIVTQGRYGSSDWTSKYRLLYSDTQKNW
RPYLQDGNIWTFEGNVNSHGVVRHELQHAILAHYIRFIPVDWSREGRIGLRLELYGCSYW
ADVISFDGNGVISYRFRSKKIKIVKDVISLKFRTTAGDGVVLHGEGQQGDYISLELRRAR
LQLSINLGSNQYGSIQGHTSVTSGSLLDDDHWHSVVIERYRRNVNFTLDHHTQHFRTNGE
FDHLDLDYEISFGGLPISAKPSSGGRENFVGCMEGITYNGDNITNLVRRKKVDTSSFRNL
TFSCAESNSFSVFFNSTSFLRLLGQSDSDTLSVSLSFRTWNPNGLLMFTALADGWVEVGL
TEGKVTVYMNVTQKKNTRIDISSGSGLNDGQWHSVHLNALENYAMLTVDGDEASTVRTAI
PIQIQTGGTYYFGGNFLHTNTRSLQRSFQGCMQMIHIDDHLADLRALEQDLAGSFENISL
DMCAIIDRCVPNHCEHGGSCSQTWNTFSCNCTGTGYTGATCHRSMYQQSCEEYKHQGKSS
GNYWIDPDGSGFISPFRVTCDMAEERVWTVLKNNLSPQTSVTSTNQEGKAALHITYNVTD
EQVLSVTSSAEYCDQFVAYACRMSRLLNTPDGVPFTWWVGRSNERHSYWGGSGPGIQKCS
CGIEHNCTNPKHYCNCDADLRSWREDAGLLVYKDHLPVSQVVVGDASRAGSEAKLTIGPL
RCQGDRSFWNAASFTSPASYLHFPSFRGETSTDISFYFKTSSTHGVFLENLGTTDFLHIE
LRGGSRVFFSFDVGSERVELSVHSPVPLNDDQWHRVEAEKNIKEAVLLLDGKYKEVRSTP
PQGHAKLEFYSELYVGASNRQRGFLGCMRALRINGVTFDLEERAQVTPGVNPGCQGHCSS
YGMHCRNGGKCVEKYNGYTCDCSLTAYDGPFCTDDVGGYFETGTLVRYDFLPEGGTPAFQ
EMKSVSSVGVPGEANLTQEELVFSFSTSSAPSILVYISSRTQDYLAVVLRHNGTLQVRYS
LGGLTEPYTIDVDHRNLANGQPHSVNISRNFREIRLQLDHYSVSTYSLPEASDTHFNLVK
SIFLGKVFETGQIDPILIARYNTPGFVGCLSRVQWNSMAPLKAALRSGPAAPVSTHGILV
PSNCGASPMTISPMASASDPWHVEAAGAVFPLSDSKARGDGVDRNSAIVGGIISMVIFTA
ICIMVFVVRHMFRHKGSYHTNEAKGAESADCADAAIIVNDPAFTETIDESKKEWFI
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgtgaccaggctgctgttgctgcctgcagccctgtgcagcatcaccagcccc
tccagcgccgcatcctcagcatcccgaaagtgcgaggacagcttggccactcctctcccc
tacagcttcttcaccagctcgtcagcgtacgcccgaggacacggagccggttacgccaaa
ctcaacagacaacaaggtgctggaggctggtcccccttggatacagaccgttacccgtgg
ttacaggtgaacctgggttctaggaagcaggtggttgccatagtgacacagggtcgctat
ggcagctctgactggactagcaagtatcggctgctttacagcgacacacagaaaaactgg
aggccatatttacaggatggaaacatctggacatttgagggcaacgtcaacagtcacggt
gtcgttcgccatgagctgcagcacgccatcttagctcactacatccgcttcatcccagtg
gactggagcagggagggacgcattggactacgcctggagctgtatggctgctcatattgg
gcagatgtgataagttttgacggcaatggtgtcatctcctaccgattcaggagtaagaag
atcaaaattgtgaaggacgtcatctctctgaagtttcgtaccaccgctggagacggggtc
gtgctccacggggagggacagcagggggactacatttccttagagctgcgcagggcgagg
ctgcagctcagcatcaacttaggcagcaaccagtacggttccattcagggtcacacctct
gtgaccagtgggagcctgctggatgacgaccactggcactcggtagtcatagagcggtac
cgaaggaatgtgaacttcactctggaccatcacacccagcacttcaggaccaatggagag
tttgaccacctggacctggactatgagataagttttggaggccttcctatatcagcgaag
cccagctcaggaggaagagagaactttgtgggctgcatggagggaatcacctacaacgga
gacaacatcactaacctggtccgcaggaagaaggtggacacctcaagctttcgtaacctg
acgttttcgtgtgccgagtccaactccttctcggtcttcttcaactcgacatccttcttg
cggctgctcggccagagtgacagcgacactctgtcagtcagtttgtctttcaggacgtgg
aaccccaacgggttgctgatgttcacggccctggctgatggttgggtcgaggtgggactg
acagagggcaaggtcacagtctacatgaatgtgacacaaaagaagaacacacgtattgac
atttcatcaggttcaggtttaaatgatggccagtggcacagtgtccatctgaatgcattg
gagaactatgctatgctgacagtggatggagacgaggcctccacagtgaggacagccatc
cccatccagattcagactggaggaacctactactttggaggtaacttcctgcacaccaac
acccgatccctgcagcgctcattccagggatgcatgcagatgatccacattgatgaccat
ctcgctgacctcagggctttggagcaggacctcgctgggtcctttgaaaatatcagcctg
gatatgtgtgccattatcgataggtgtgttcctaatcactgtgagcacggtgggagctgt
tctcagacatggaatacattcagctgcaactgtaccggtactggatacaccggagcaacc
tgccatcgatcgatgtatcagcagtcctgtgaggagtataagcaccaggggaagagttca
gggaattactggatcgacccagacggcagtggattcatcagccccttcagagtcacttgt
gacatggcagaggagagagtttggaccgtgctgaagaacaacctatctcctcagacatca
gtcaccagtacaaaccaggaagggaaggcagctctgcacatcacttacaatgtgacagat
gaacaggtgctgtcagtcaccagcagtgcagagtactgtgaccagttcgtggcctacgcc
tgtcgaatgtctcgtctgctcaacactcctgacggcgtcccgtttacctggtgggtagga
agatccaatgagaggcattcttactgggggggttcaggaccaggcatacagaagtgttcc
tgtggtatcgaacacaactgtactaaccccaaacactactgcaactgtgatgccgacctg
cgcagctggagggaggacgctggcctgttggtgtataaagaccacctgccagtcagccag
gtcgtggttggtgatgcgagcagagctggatccgaggccaagctgacaatcgggccgctc
agatgccagggggaccggtccttctggaatgcagcgtccttcactagccccgcctcctac
ctgcatttcccgtccttcagaggagaaaccagcactgacatctccttctactttaagact
tcgtccactcacggtgtctttctggagaacttgggaaccactgacttccttcacattgag
ctcagaggaggctccagggtgttcttctctttcgatgtgggcagtgagcgggtggagctc
agtgtccactcgccggtgccactaaatgacgaccaatggcatcgcgtggaggctgaaaag
aacatcaaggaagcggtgctgctgcttgatgggaagtacaaagaggtcagatccacgccg
ccccagggacacgctaaactggagttctacagtgagctttatgttggggcctccaatcgt
cagaggggttttctgggctgcatgcgggctctgaggataaatggtgtgacctttgacctg
gaggagagggcccaggtaactccaggggtgaatccgggctgccagggccactgcagcagt
tacgggatgcactgcaggaacggggggaagtgtgtagaaaagtacaacgggtacacgtgt
gactgctccctcactgcgtacgacggacccttctgcactgacgatgtaggggggtacttt
gagaccggaaccctggtgcgttacgacttcctgccagaagggggaactcccgcgtttcag
gagatgaagagcgtgtccagtgtcggcgttcccggtgaggccaacctgactcaagaagag
ctggtcttcagcttcagcacctccagtgctcccagcatcctggtctacatcagctccaga
actcaggactacctggctgtggtgctccgtcacaacggcaccctccaggtccgctacagc
cttggtgggctaacagagccgtacaccatagatgtggaccaccgtaacctggccaacggg
cagccacactcggtcaacatcagcaggaactttagggagatacgactgcagctggaccac
tactcagtgtccacatacagcctgcccgaggcctcggacacccacttcaacctggtcaaa
agcatctttcttggaaaagtctttgaaaccggacagattgacccgatcttaatcgcgcgc
tacaacacgccgggcttcgtgggctgtctgtccagggttcagtggaacagcatggcgccg
ctgaaggctgcgctgcgctcaggcccggctgcaccggtcagcacccatgggatcctggtc
ccatccaactgtggagcctctcccatgaccatctcgcccatggcttcggctagtgacccc
tggcacgtagaagcagctggagccgttttcccgctcagcgacagcaaagcccgcggggat
ggagtggatcgcaactcggccatagttggaggtatcatttccatggtgatcttcacggcc
atctgcatcatggtgtttgtggtccgtcacatgttccgtcataaaggctcctaccacacc
aacgaggccaagggagccgagtcagcagactgcgccgacgcggcgattatcgtcaacgac
ccggccttcaccgagaccatcgacgagagcaagaaggagtggttcatctga
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