Gasterosteus aculeatus (three-spined stickleback): 120816005
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Entry
120816005 CDS
T07457
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120816005 (kcnn1a)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
120816005 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Ion_trans
DALR_1
IRK
Motif
Other DBs
NCBI-GeneID:
120816005
NCBI-ProteinID:
XP_040027138
UniProt:
A0AAQ4S208
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Position
III:8509492..8550412
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AA seq
1005 aa
AA seq
DB search
MRHRCAGAVHQHHVPDEKQASSEQSGDPVAPVFSLPPPPSSQHRDRTSSTAAHRQSLQEL
PCLSQPSRRPVHSGDPLASYDTAQPPSRRTGEPSSTGKPAHLQQDPWAPAGSRRQQQPPQ
LEKQPVFPSCHCSFSEQEASLSQNRNHPDDLLPPQPSPPFPPPIPPPPPSSSSSSLQFSQ
ESKRGDRLRRSANNCQQASIVERCRGGGGAGGHRDHRQLLQQQHQQHSHLRLQQRDPSPE
RTHANLQKGRSLNVCESTEANRRAFEPRTQDLQQQQIPQLRAQQQLLVGSSLPINYCASG
SGELCRTHQAPLLQQQEQQQQQQQQQQRQGALGLCPQRPQHCEDRNKSGWITAQGDQAQP
HSRDSRVTTPATQQAYAGNSSTTGSNSSKDSPNYGSSYHLWPESPHKGEERIRIDHHKAS
TEQKKLSHAGSKPSLSESSGRLPQIAMNSCKYNGGVVRPLVGSLASSSRRNLAELDSETQ
PLQTLHSSGLEVVVSKGNGGEDPSKASNESLVREGSARGGGRAPQKKNRDIGYRLGHRRA
LFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTVILLGLII
MYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYT
PSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM
TICPGTVLLVFSISSWIIAAWTVRVCERDTMYHDKQEVTSNFLGAMWLISITFLSIGYGD
MVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTA
ANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTLV
DLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDSVTGSLQALPCLISQAITQQQQDFL
DGFVHRFRPASLASERSERSERSWTSTARRRRSPSTAPHTSSDSG
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtgcgcgggagctgtccatcagcaccacgtccccgacgaaaagcaagcg
agcagcgagcaaagcggagacccagttgcgcctgttttcagcctgccgcccccgccctct
tctcagcaccgagaccgcacatcctccaccgccgctcaccgccagagcctccaggagctg
ccgtgtctgagccagccctctcggcgacccgttcacagcggcgaccctctggcgagctac
gacaccgcccagccgccttcgcgccgaaccggggaaccaagcagcaccgggaagccggcg
cacctgcagcaggatccctgggccccggccggctctcggcggcagcagcaaccgccgcag
ttggagaagcagcctgtttttccgagctgccactgcagtttttcggagcaggaggcgagc
ctctctcaaaaccgtaaccaccctgacgatcttctcccaccacagccctccccacctttt
ccgccgcctataccgccgccaccgccgtcgtcctcctcttcctccctgcagttttcccag
gaatctaagaggggcgatcgtctccgaaggagtgccaataattgccaacaggcaagcatc
gtggaacgctgcaggggaggaggaggagcaggagggcaccgagaccacaggcagttgttg
cagcaacagcatcaacagcacagtcatttaagactccaacagagggacccctcccctgaa
agaacccatgcaaacttgcagaaagggcgctctttaaatgtatgcgagtcaaccgaggct
aacaggagagcattcgagcctcggacccaggacctgcagcagcaacagatcccacaacta
cgagcgcagcaacagctactggtggggagcagcttgcctatcaactactgcgccagtggc
tcaggagagctatgtaggactcaccaggctccactgctgcaacagcaagagcagcagcag
cagcagcagcagcagcagcagcggcaaggcgcactggggctctgtccccagcgtccgcag
cactgtgaagaccgcaataagtctgggtggatcaccgcgcaaggcgatcaggcgcagcca
cacagccgcgactcccgcgtaacaaccccggcgacacaacaggcatacgcggggaactcc
tccacgaccggcagcaacagcagcaaagacagccccaactacggctcgagctatcacctg
tggccggagagcccgcataaaggagaggagaggatacgcatcgaccaccataaggcctct
actgagcagaagaagctgagccatgctggatccaagccctccctctccgagagcagcggc
cgactccctcagatagccatgaactcctgcaagtacaatggcggcgtggtgagaccactg
gtgggcagcctggcgtcctcgtcgcgccgcaacctcgcggagctcgactcggagacccag
cccttgcagacgctgcacagctctggcctggaagtggtggtgtccaagggcaacggcggc
gaagaccccagcaaggcgtccaacgagagcttggtcagggagggcagcgcgcggggcgga
ggcagggcaccgcagaagaagaacagggacattggctacaggctcggccaccgccgggcg
ctgtttgagaagcggaagcgactcagcgactacgcactcatcttcgggatgtttgggatt
gtcgtcatggtgacagagacggagctgtcatggggggtttacactaaggaatcttcatac
tcatttgcactgaaatgccttatcagcctttccactgttatattgcttggtcttataata
atgtaccatgcccgggaaatccagctgtttatggtcgacaatggtgcggacgattggagg
atagccatgacgtatgagcggatcttcttcatcgtgctggagctgctggtttgtgccatc
catcccatcccgggccagtacgtcttcacctggacggcccggctggccttcacctacacg
ccgtcggtggccgacgccgacgtggacatcatcctctccatccccatgttcctgaggctc
tacctgataggcagggtcatgttactccacagcaagctgttcacggacgcttcatctcgc
agcatcggcgccctcaacaagatcaacttcaacacacgcttcgtcatgaagaccctcatg
accatctgcccgggaactgttctgctggtgttcagcatatcctcctggatcattgctgca
tggactgtgcgcgtctgtgagagggataccatgtatcacgacaaacaggaagtgaccagt
aacttcctgggagccatgtggctcatatcgatcaccttcctctccattggttatggggac
atggtgccacacacgtactgcgggaaaggcgtgtgtctgcttacagggattatgggagct
ggttgcactgcactggtggttgcagtggtagccaggaagctggagctgaccaaggctgag
aagcatgtccacaacttcatgatggacacacaactctgtaaacgagtaaagaacacagct
gccaatgtactcagggaaacatggctcatctacaaacacactaagttggtcaaaaagatc
gatcacgccaaggtgcggaaacaccagcgcaagtttctccaagccattcaccaagctcag
aaactgcgcagtgtgaagatggagcagaggaaactcaatgatcaggccaacacattggtg
gacctggcaaagacccagaatgtgatgtatgacctcgtgtcagagctgcaggagcgcagt
gaggagctggacaagcgcatcggcacattggaggacaagctggactcggtgacgggcagc
ctgcaggcgctgccctgcctcatctcccaagccataacccagcagcagcaggactttctg
gacggctttgttcaccgctttcggcccgcttcactagcctctgagcgctctgagcgctcc
gagcgatcctggacttccaccgcccggaggcggcgctctccctcgacagcaccacacacg
tcctctgatagcggataa
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