Gasterosteus aculeatus (three-spined stickleback): 120816068
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Entry
120816068 CDS
T07457
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120816068 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120816068 (bicra)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
120816068 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
120816068
NCBI-ProteinID:
XP_040027299
LinkDB
All DBs
Position
I:17211515..17224038
Genome browser
AA seq
1879 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHLDTDDLLDGSSDPTSSFFSTTGGHVPEVQPA
VQLSVNEPAGLPRVSVDLDFLEDDDILGGSPGGEGGSNGIGTNHEPCDILQQSLAEANIT
EQSLQEAEAELDLGSFGIPGLTQVVQTLPDASLSGAAGAALGIGVGGAAAIFPGSAPSAI
ATPPNATADMLGSVLAQQGLQLQSQVMNKTISVQPFMQPMGLGNVTLQPISSLQALPNGS
QSGHLGIGQIQVVGQPTVMTINQSGQQILTKAMGSYQLHQSGPEVSGAGPQTGLGGSGGG
LLIQGNKGSPALNGPSVSVSSTNSSSGGTMTSPAGLLGFGSTTLSSGIGPQAQTQGQIMQ
NVIIQRTPTPIQPKPSQGGAIQPKLFKQQQQHPQPAPQTLQNDGHKALGLQQIPVSTAQN
VAFLTGKPGSNVVLSTQATSQGQQFQQTLFKQQAAQPSGKPLSVHLLNQQGSIVIPSQTV
LQGQNHQFLLPQLQAGGQILTQHPGGHIITSQGPGGQLIANQILTANQNINLSQVLTSQG
HPGAAHILSGPIQLQPGQMGTPTLFQMPVSLAQSQSQTQTHTVSGHAQTVIQGMPIQNSL
TMLSQVQGLSPAVSLQPAMQPQPGGVPSSSGSGTGAATMAQGHAGECVTVLGSSTDQAAH
PTQQHATQSSILTMQPVSSVSTVTTVPCSSPSMSVSTSSSVTAVGLVPHQAQHSPGRLLF
TNQGSSMILSQESLQMFLQQEQHQQSENESTPSVGVPASVIVNSNSVSAPAPAVNDSQLT
DSWVGQSHSPSPGPSHMTTVVKQVPSSGHPTSLKIQSMSPSPIMSAHATAPPLADSPQPC
RSPLTLGQQMQSPHHQQQSRPPSQPQPQSQTPSRSCTPSSHPQLFIVHNQMAESPQPGQQ
GQPQQAHIQVQLQPRPASQPAPYQQEMPPLSQSPKPPPTPPAPHQFTAAPVSTSATASGL
VKAQVPIQGLTAEQQHHLQLIGAQIQTLSTITQPSPQQKQLLEKLHQVQQNILLQAKQST
QPQVTSQFGSQQDVPVDKVVITSSANPGTPAPLLSVLQPTPLLIKAPATASSDLQVFSGA
QGPAGAMVNQTVTPASLSQPVQVQPKPGVIGSAGGMTQGKGGMQIQVMGASLAQMPAPQP
PASVQTQTTTMKMPFSAEPSKEAKMLEQLRKQQGSVLHPNYSAPFQSVEDTLHRLLPYHL
YQGTANSSQDYQRVDDEFENVSCQLLKRTQAMLDKYRHLLFAESKVFKPEQRLGPSAEMV
MIDRMFIQEEKLALSQDRILAKERPEEFVANARMLESVASSQHKSSFAEAPSLSGGVAAA
APPPPPAAPPPAAPAPPPLPKVAPNPSPASAPSPVPAPAPPPPSTNPFPSTKLVIKQGGG
GASVSWSSSCPPAAASRLAEPTSQSSSFSRAPAAAASSSSFSSSSFNSPAAAADDDALPQ
RTSRPPMKTYEARRRIGLKLKIKQDQTGFSKVVHNTALDPVHTPQPQQSSQSTSQPRTQF
EASAPHPKPEPLSSPPSVIRTQPPVCSAISAVTTTTTRCNQPPRGNAPPNSAPSSSTSSS
HTWSLSTSSSSSTQMNGTLDHDNVGRVKHNSASTATPSQTTCRLPLRKTYRENISPRVRP
GVPGGGGDESLSYPRPTLSPTKHDASPSPPSERTVIASMKVEKRGREASHTHTELGHDTG
RLGGAMEGLEEMDEVFNRGIKTSQHHHLPQLLDREGAKERGEEHTDPETDVSKYKRASGK
NRHRASGAFRMDQHAPGPPSPESSFTRDSLLPAKRCKSDSPDMDNASFSSGSPPDDSLNE
HLQCAIDSILNLQQEPSARIKGGNSRSHQSQRAGGSAASSHRPSAPPSSSASSSSSLAQH
PPVGGRGHNGSLVPQTQSR
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggcaggtgccttctagatgtaatttgtgacccagaagctctcaat
gattttcttcatggatctgagacccatttggacactgacgacctattggatggttcgagt
gaccccacaagctcgttcttctctaccactgggggccatgttccagaggtccaacctgca
gtccagctgtcggtcaatgagccggcaggcctacccagagtcagtgttgacctggacttc
cttgaagatgatgacatcttgggaggatccccgggtggtgaaggtgggagcaatgggatc
gggacaaatcacgagccatgtgacatcctgcagcagagcctggctgaagccaacatcaca
gagcaaagcttgcaggaggcggaggctgagctggatctgggctcctttggaattccaggc
cttacacaggtggtacagacactgcctgacgccagcctctctggggctgcaggtgctgca
cttggtataggtgttgggggagcagcggcaattttcccaggctcggccccgagtgccatc
gctactcctcccaatgccacagctgacatgctggggtcggtgcttgctcagcaaggcctt
caactccaatcccaggtcatgaacaagaccatcagtgttcagccattcatgcagccgatg
ggcctgggaaatgtgacacttcaacccatttctagtctacaagctcttcctaatgggagt
cagtctggacatttgggtatcggacagattcaggttgtaggtcagcctacagtcatgact
atcaatcagtctgggcagcaaatcctgacaaaagccatgggtagttaccagctgcaccag
tctgggccagaagtatcaggtgctggtcctcagacggggctcggaggctcaggaggtgga
cttctgatccaaggtaacaaagggtctccagctttaaatggaccatctgtttctgtcagc
agcacaaacagcagcagtggcggtacaatgacttctcctgctgggcttcttggctttggc
agcaccactctaagttcaggaattggaccgcaggcgcaaactcaaggccaaatcatgcag
aacgtgatcatccagcgaacaccaacacccattcagcctaaaccctctcaggggggagcc
atccaaccgaaactcttcaaacagcagcagcagcacccacagccagcaccccaaaccttg
caaaacgatggccacaaagctctcgggctgcaacaaattccagtttctactgctcagaat
gtagccttcctgacgggaaagccaggctcaaacgttgttctgagtactcaagccacttca
caaggccaacagtttcagcaaacccttttcaagcaacaagcagcacaaccgtctggcaag
cccctcagtgtacacttgttaaaccaacaaggcagcatcgtcattccctcccagacagtc
ctacaaggccagaatcaccagtttctcctgccacagctacaggcaggtgggcagatactg
acccaacatcccggggggcacatcataactagtcagggacctggtggacagctcatcgca
aaccagatactaactgcaaaccagaacatcaatttgagtcaagtgttgacctcacagggc
caccctggggccgcccacatcctttctggacccattcagctccaacctggccagatgggc
acgcccaccctctttcagatgcctgtctcattggctcagagtcaaagccaaacacagacc
cacactgtctcaggccatgcccaaaccgtcatacagggcatgcccatccagaactccctg
accatgctgagtcaggtgcagggactaagccccgcagtgagcttgcagccagccatgcaa
cctcagccaggtggtgttcccagcagcagcggcagcggcacaggagcagcaactatggct
caaggccatgctggagagtgcgttactgtgctgggtagctccaccgaccaggcggctcat
cccacacagcagcatgcaacccagtcgtctatcctcaccatgcaaccagtttcctctgtg
tccactgttaccacagtgccctgttcgtctccgtccatgtctgtgtccacctcttcctct
gtcacagcagtggggctggtcccccatcaggctcagcacagtccaggaaggttactgttc
accaaccagggctccagtatgatcctgagccaggagtctctgcagatgttcttgcaacag
gagcagcaccaacagtcagagaatgagtccaccccctctgtgggcgtaccagcgtctgta
atcgtcaacagcaacagcgtcagtgctccggcccctgctgtcaatgacagccaattaact
gactcttgggtgggtcagagccacagcccttcccctggcccctcccacatgaccactgtg
gtaaagcaggtaccctccagtggacatccgacgtccctgaagatccagagcatgtccccg
tcgccgataatgtcggctcacgccacagcgccccccctggcagacagcccgcagccttgc
cggtctcctctcactctgggccagcagatgcagtcaccacaccatcaacagcagtcgcgt
cctccctcccagcctcagccgcagtctcagactccctcccgctcgtgcacgccctcgtct
cacccgcagctctttattgtacacaaccaaatggccgagtccccccaacccggccaacaa
ggccagccgcagcaggcacacattcaagttcagcttcagcctcgaccggcctcgcagccg
gccccttatcaacaagaaatgcctcccttgtcacagtcacccaagcctccccccacgcca
cctgcaccgcaccagttcactgctgctcctgtcagcacctctgccactgctagtgggcta
gttaaagcccaggttcccatccagggcctgacagcagagcagcaacaccacctgcaatta
ataggagcacagattcagaccctgtcgaccatcacccagccctcccctcagcagaaacag
ctgctggagaagctccaccaggttcagcagaacatcttgctgcaggccaagcagtccact
caacctcaagtcaccagtcagtttggctcccagcaagacgtgcctgttgataaagtggtg
attacatcatcagccaaccccgggacacctgctccgcttctctcggtgctgcagccgaca
ccgttgctcatcaaagctcctgctacagcatcaagtgacttacaggtattctcaggagcc
caagggccagctggagcaatggtgaatcagactgtcactcctgccagcctttcccagcct
gtacaggttcagccaaagccaggagtgatcggctcagcgggagggatgactcaagggaaa
ggtggcatgcagatccaggtgatgggagctagtctggctcaaatgcctgctccacagccc
ccagcttcagtgcaaactcagacaacaacgatgaagatgcctttcagtgctgagcccagc
aaagaggccaagatgctagaacagctgaggaaacagcagggttcagtgcttcacccaaac
tacagtgctcctttccaatctgttgaggacacattgcacagactgctgccttaccatctc
taccagggaactgcaaactcttctcaagactatcaaagagtggatgatgagtttgagaat
gtctcctgccaactgctgaaaaggacccaggcgatgctggataagtatcgccacctgctc
tttgcagagtcaaaagtgtttaaacccgagcagagactgggcccctcggcagagatggtg
atgatcgaccggatgttcattcaggaggaaaagcttgcattgagtcaggacaggattttg
gccaaggagagaccagaggagtttgtggcaaacgcacgcatgttggagagtgtagcttca
tcccaacataaatcctcttttgccgaggcgccgtcactgagtggaggcgtagctgccgct
gccccgcctccgccacccgcagctccgccacccgcagctcctgcccctccccctcttcca
aaagttgccccaaatccttctcctgcatctgccccatctccagtccccgctccagctcca
ccacctccttccaccaaccctttcccgtctaccaaactagtaataaagcagggtgggggc
ggagcctctgtgtcctggtccagcagctgtcctccagctgcagcaagcaggctggccgaa
cccaccagccagagctcctccttcagccgcgccccggcagcagcagcatcatcatcctct
ttctcctcttcgtccttcaactctccagcggcggctgccgatgacgacgctctcccgcaa
agaaccagccggccgcctatgaagacctacgaggctcgcaggagaatcggcttgaagctc
aagatcaagcaggatcaaactgggttcagtaaggtggtccacaacactgccttagacccg
gtgcacacaccgcaacctcagcagagcagccagtccacctcccagcctcggactcagttc
gaagcttctgcgccgcacccaaagcccgaacctttatcaagccctccttccgtcatcaga
actcagccccctgtctgctccgccatctcggcggtcaccacaacaaccactcggtgcaac
caaccgccgagaggtaatgccccccccaattcggcgccgtcttcctctacctcttcctct
cacacgtggtcattgtccacatcctcctcatcctccactcaaatgaatgggacattagat
cacgacaacgtgggtcgggtcaaacacaattctgcctccactgccactccctcacagaca
acatgtcggctcccccttcgaaaaacataccgggaaaacataagtccccgggtgagaccc
ggcgtcccgggagggggaggagacgaaagtttgtcctaccccagacccacactgtccccc
accaagcacgacgcctccccctcgcccccctcagagcggacagttatagccagtatgaag
gtggagaaaagaggcagagaggcctcacacactcacacagagttgggccacgatacgggc
cggttagggggtgcaatggaggggctggaggaaatggacgaggtgtttaaccgtggtatc
aaaacgtcacagcaccatcatctcccacagctcctggacagggaaggggcaaaggagagg
ggagaagagcacacagacccggaaacggatgtaagtaaatacaagcgggcgagtgggaaa
aatagacacagggcatccggggcattccgaatggaccagcatgcccctggtcctccctcg
ccggagtcctccttcacgcgagactctttgcttcctgcgaaacgctgcaagtcggactcc
cccgacatggataacgctagcttctccagcggcagcccgccggacgactctctgaacgag
cacctgcagtgtgccatcgacagcatccttaacctgcagcaggagccctccgcccgcatc
aaggggggcaacagcaggtcacaccaaagccagcgcgcggggggctcggcagcctcatcc
cacagaccttcagcaccaccctcctcctccgcttcgtcgtcctcgtccttggcccagcac
cctccggtcggtggccggggccacaatggcagcctggtaccccagactcaaagcagataa
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integrated database retrieval system
