Gasterosteus aculeatus (three-spined stickleback): 120816080
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Entry
120816080 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120816080
Cell adhesion molecules [BR:
gat04515
]
Cadherins
Protocadherins
120816080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
120816080
NCBI-ProteinID:
XP_040027329
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All DBs
Position
III:353927..357940
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AA seq
1008 aa
AA seq
DB search
MGNAGRNGLLVLVCVVLTSPVLVIQGKTVKYQTFEEDAPGTVIGNLATDMSSTGSRTNFR
MMKQFNSSFIRLRESDGQLATGERIDRERICKHTAHCLIAFDVVSFSKEQFKLIHVEVEV
KDINDNSPEFPRKESSLEISENTVVGTRIPLDFAVDEDVGANYIQSYQISVNSHFSIDVL
SRADGVKYAELVLMKELDRETQASYALGLVAMDGGNPSRTGTTRINVKVKDYNDNSPVFD
RNSFSLDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGHQAPTEIRQLFRVDRKTGRLT
LESPIDFESKTTYEFDVQATDLGPNPTSAICKIVVQVQDVXRQRTGKSPSPLXRQSRRGX
RTSPSRRARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDRE
KIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNPPVFSKPAYEVAVAENNAPGAYIAT
VVARDVDMGSNGKVSYKLADTYFMGSPISTFVSLDPASGSLYALRSFNYEVMKQLELRVT
ASDSGSPSLRGSADVYVRIADQNDNAPAITQPPLHNGSAEVLLPRDAPSGYVITRVEARD
ADEGVNAELSYGLATGEPSVFSVNKATGEIYLNQVLSHEVDQTLSVTVTVSDNGRPALTS
TAALHFLIIAGSPPSDRTVYQSGGGDEVHAQWDLSVVIIVVLAGSCTLLLLAIILIATTC
NRRKRDKSGEDSDSYGEKGALERGRNHVADNPLLPLHGGGVEAGFEGHSYCRQPGGFMTT
TPTVKDMCSASEDGSEVPCVYDSDTNSKPPRGNKHEGYSTLPGYGNAKEAVRPITIWKGN
SYTTISARDPAFSGKDSGKGDSDFNDSDSDVSGETGLKKDGVVVPPMGGQNALWACTSEC
KVLGHSDRCWSPSAVRAHAAPSPAPTLSSFSGMSKTASLPRDPHRRDNYYQANLPKTVGL
QSVYEKVLHREYDYVLVTPPRPARVQEAGDIAMAVYTPTPTHRPNNDV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgcagggcggaacgggctgttggtgctagtgtgcgtcgttttgacgagcccg
gttctggtcatacaagggaagacggtgaaataccagacgtttgaggaagacgcaccgggg
acggtgatcggaaacttggccacggacatgtcctccacgggctcccggaccaatttcagg
atgatgaaacagttcaactcctctttcatccgtttgagggagagcgacgggcagctggcc
accggagagaggatagacagggagcgcatctgcaaacacaccgcgcactgcctcatcgcg
ttcgacgtggtcagcttctccaaagagcagttcaaactcatccacgtcgaggtggaggtc
aaggacatcaacgacaactcccccgaattcccccggaaagagtcgagcctggagatctcc
gagaacacggtggtgggcacgcggatcccgctggactttgccgtggacgaggacgtcgga
gcgaactacatccaaagctaccagatctccgtcaacagtcacttttcaatcgacgtgctg
agcagggccgacggggttaaatatgcggagctggtgctcatgaaggagctggaccgggag
acgcaggcttcttacgcgctggggctggtcgccatggacggtggcaacccgtcccgcacg
ggaacaacgcgcatcaacgtcaaggtgaaagactacaacgacaacagcccggtgttcgac
aggaacagcttctccttggacctgcccgaggacgcaccggtgggcttccttttgctggac
ctgaacgcggaggacccagacgaggggctgaacggcgaggtggtgtacggcttcggtcac
caggcgccgacggaaatacggcaactcttcagagtggacaggaagaccgggcgtctcacc
ctggagagcccaattgacttcgaaagtaagaccacctacgagtttgacgtccaggccacc
gacctgggtccgaacccgacctcggctatctgtaaaatcgtggtgcaggtgcaggacgtt
taacgacaacgcaccgggaaatctccatcacccctatgacgtcaatcacggcggggatag
cgtacatcaccgagccggcgggccagagagagcttcgtggctctggtcagcacctcggac
agagactccggcgccaacgggcaggtgcactgcacgctgtacggacacgaccacttcagg
ctgcagcaggcgtacgaggacagcttcatgatcgtgagcacgagcccgctggaccgggag
aagatcccggaatataacctgacggtggtggcggaggatctgggctcccctcccttcagg
accatcactcagtacacaatccgactgacggacgagaacgacaaccctccggtgttcagc
aaaccggcgtacgaggtggccgtggcggagaacaacgcgcctggcgcgtacatcgccacg
gtggtggcgcgagacgtggacatggggtcaaacgggaaggtcagctacaaactggcagac
acatatttcatgggctccccgatctccaccttcgtgtcactggaccccgcaagcgggtcg
ctttacgcgctccgcagcttcaactacgaagtgatgaagcagctggagctccgcgttacg
gccagcgacagcggctccccgtcgctgcgcggcagcgccgacgtctacgtgaggatagcg
gaccagaacgacaacgcaccggcgatcactcagccgcccctccacaacggctccgccgag
gtcctcctgccccgggacgcaccgagcggctacgtcatcacccgggtggaggcgcgggac
gcggacgagggcgtgaacgcggagctgtcctacgggctggccaccggagagccctccgtg
ttctcggtcaacaaggccaccggggagatctacctcaaccaggtgctcagccacgaagtg
gaccaaactctgagcgtgaccgtgacggtgagcgacaacgggaggcccgcgctcacctcc
accgccgcgctccacttcctcatcatcgcgggctccccgccgagcgacaggacagtgtac
cagtcgggcggcggggacgaggtgcacgcgcagtgggacctgtccgtggtgatcatcgtc
gtcctggcggggagctgcacgctcctgctgctcgccatcatcctcatcgccacgacctgc
aaccgtcgcaagcgggacaagagcggagaagacagcgactcatacggcgagaagggcgcg
ctggagcgcggcaggaaccacgtggcggacaacccgctcctgcctctccacggcggcggg
gtcgaagcgggctttgagggccactcctactgccgccagcccgggggcttcatgactacg
accccaactgtaaaagacatgtgctcggcctcggaggacggcagcgaggtgccctgcgtg
tacgactcggacaccaacagcaagcccccgagagggaacaaacacgagggctactccact
ctgcccggctacgggaacgccaaagaggctgtgaggcccatcaccatctggaaggggaac
tcctacaccaccatttccgccagggacccggccttcagcggcaaagacagtggcaaggga
gacagtgacttcaacgacagtgacagtgacgtcagtggagaaactggcctgaagaaggat
ggtgttgtcgttcctcccatgggcggccaaaatgctctgtgggcttgcaccagcgaatgt
aaggttcttggacactccgatcgctgctggagcccctcggcagtgagagcccacgcagcc
ccctctcctgcccccactctctcctccttcagcggcatgtccaagacggcctccctgccc
cgggacccccaccgccgggacaactactaccaggccaacctccccaagacggtgggcctg
cagagcgtgtacgagaaggtgctgcacagagagtacgactacgttctggtcaccccgccc
cggcccgcgagggtacaggaggccggcgatatagccatggctgtttacacacccaccccg
acacaccgtcccaacaacgacgtctaa
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