Gasterosteus aculeatus (three-spined stickleback): 120816242
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Entry
120816242 CDS
T07457
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120816242 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120816242 (gtf2b)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
120816242 (gtf2b)
Prokaryotic type
Archaeal type
TFB
120816242 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
Bradykinin
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
120816242
NCBI-ProteinID:
XP_040027675
UniProt:
A0AAQ4PMV6
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Position
III:8915772..8922343
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AA seq
348 aa
AA seq
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MLLTPWRGKYHSVTNWQSQTQKALRMLQNDSSFCCCGDGLSLPRVQCPNHPDTILVEDYR
AGDMICPECGLVVGDRVIDVGSEWRTFSNEKALKDPSRVGDAQNPLLNGGDLTTMISKGT
GAASFDEFGNSKYQNRRTMSSSDRAMLNAFKEISTMADRINLPRNIIDRTNNLFKQVYEQ
KSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDL
ITTGDFMSRFCSNLGLPKQVQMAATFIARKAVELDLVPGRSPISVAAAAIYMASQASAEK
KTQKEIGDIAGVADVTIRQSYRLIYPRAAELFPPDFKFDTPVDKLPQL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttactccttggcgtgggaagtatcattcagtcacaaactggcagagtcagaca
cagaaggcgctcagaatgctgcaaaatgattcatctttttgttgttgcggagatggcctg
tcccttccaagagtccaatgtcccaaccaccctgatactatactggtggaggactacaga
gcaggggacatgatctgccctgaatgtggccttgtagtaggtgaccgtgttatcgacgtc
ggctcagagtggaggacgttctccaatgagaaagcactcaaggatccatccagagtggga
gacgcccagaacccgctgctcaatgggggcgacctaaccaccatgatcagcaagggaacc
ggcgcagctagttttgatgaattcggtaactccaagtatcagaaccggcggaccatgagc
agctcagaccgggccatgctcaacgcctttaaagaaatcagcaccatggcagatcgcatc
aacctgccaaggaacatcatcgacagaacaaacaacttattcaaacaggtttatgaacag
aagagcctgaagggccgagccaatgacgccatagcctcggcctgtctctacatcgcctgc
agacaagaaggtgtaccaagaacatttaaagaaatctgtgccgtgtctcggatctccaag
aaggagatcggcaggtgcttcaagctgatcctgaaagcgctggagaccagcgtggacctc
atcaccaccggagacttcatgtctcggttctgctcaaacctgggcttgcccaaacaggtg
cagatggcggccaccttcatcgccagaaaggctgtggagctcgacctggttcccggcagg
agccccatctcggtggctgcagcggcgatctacatggcctcccaggcctcggcagagaag
aagacccaaaaggaaatcggggatattgccggcgttgcagatgttacgatcagacagtca
taccgactcatctacccacgcgccgcagaactcttccccccagacttcaaattcgacacg
cctgtcgacaagctgccccaactgtga
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