Gasterosteus aculeatus (three-spined stickleback): 120816243
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Entry
120816243 CDS
T07457
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03030
DNA replication
gat03410
Base excision repair
gat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120816243 (zgc:110269)
03410 Base excision repair
120816243 (zgc:110269)
03450 Non-homologous end-joining
120816243 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gat03032
]
120816243 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120816243 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120816243 (zgc:110269)
DNA replication proteins [BR:
gat03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
120816243 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
120816243 (zgc:110269)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
120816243 (zgc:110269)
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120816243 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
120816243
NCBI-ProteinID:
XP_040027678
UniProt:
G3PT35
LinkDB
All DBs
Position
III:8995233..8999664
Genome browser
AA seq
348 aa
AA seq
DB search
MGITKLADLIRLNAPDAISHKDIIDYSGKVIALDTSVVMNQFRAATPSLSPLTGLFFRTL
TFLEHDIKPVFVFDGKPPKEKAAVLEKRAHAAGWRSANRTGAASSQTTDCLQLLKLLGVP
VVQAPGDAEALCAWLVKQGTADAVASEDMDTLPFGGNILIRQLNAKKDSEVVEYSLNKLL
EKLQISHEEFVDLCILLGCDYCDKIAGLGPRRALTLIQKHRTIENVVLHVNRKTHPVPQF
WGYKEARKIFLDAPQTEAPELSWTEPDEEALVGFLCHVKRVKEDRVRSRMENFRQTRERN
REEREEERAEGRSRQTRMEDFFRVTRKREQPVKAADPLSSNRKRPKTK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggggatcactaaactggccgacttgatccgcctaaatgctcccgatgccatttctcat
aaggatatcattgactactcgggaaaagtaatcgcactggacacctctgttgttatgaac
cagttccgtgcggctacaccttcactcagccccctgacaggcctcttcttccgcacactc
accttcctggaacatgatattaagccggtctttgtgtttgacgggaagcctccaaaggag
aaggcagctgttctggagaagagagctcacgcagctggttggaggtcagccaaccgcacc
ggcgcagcgtcatcccagaccaccgattgtctccagctcctgaagcttctcggtgtaccc
gtcgtccaggctccaggagatgctgaggcactgtgcgcctggctggtaaaacagggcact
gcggacgctgtggcatcagaggacatggacacactgccttttggaggcaatattctgatt
cgccagctaaatgccaagaaggacagtgaggttgttgaatattctttaaacaagctgtta
gagaaactccaaattagtcacgaggagtttgttgacctgtgcattttgctgggctgtgac
tactgtgacaagatcgccggtttgggtccaaggagagctctgacgttgatccagaagcac
cgtactattgagaatgtggttttgcatgtcaacagaaagactcatcccgtgccacaattt
tgggggtacaaagaagcacggaagatattcttggatgcaccacagaccgaagctcctgaa
ctcagctggactgagcccgacgaagaagccttagttggcttcctctgtcacgtcaaacgt
gtcaaggaggacagggtccgtagtcgaatggagaacttccgtcagacgcgggaacgtaat
cgagaggagagggaagaggagcgtgcagaaggacgcagcaggcagactcgcatggaggac
ttttttagagttactagaaaaagggagcagcccgtcaaagctgcagaccctttaagcagc
aacagaaagagaccaaagaccaaatag
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