Gasterosteus aculeatus (three-spined stickleback): 120816251
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Entry
120816251 CDS
T07457
Name
(RefSeq) transcription factor HES-1-B-like
KO
K06054
hairy and enhancer of split 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03460
Fanconi anemia pathway
gat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120816251
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120816251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120816251
03400 DNA repair and recombination proteins [BR:
gat03400
]
120816251
Transcription factors [BR:
gat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120816251
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
120816251
BRITE hierarchy
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GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
120816251
NCBI-ProteinID:
XP_040027688
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Position
III:9063241..9065294
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AA seq
239 aa
AA seq
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MPAGTLERTSLTAAAATPAAGKPRALTEHRKSSKPIMEKRRRARINESLGQLKTLILDAL
KKDSSRHSKLEKADILEMTVKHLRNLQRHRMTAAVNTDPSVLGKYGAGFSECVGEVTRFL
STCDGMNTEVRTRLLGHLASCITQINAVNLCTPHPVAPGPAQTGAQITAASAPLTPSKSV
SSMHASPEAIKLYGGFQVVPTRDGQFAFLVPGTALLPQNSHAVSPVAPRVTLDPVWRPW
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgccagccggtactttggagagaacgtctctcaccgccgctgcggccacaccggcggcc
gggaagcctcgcgccctgacagagcacaggaagtcttccaaaccgatcatggaaaagcgg
agacgtgcgcgcatcaacgagagtctgggccagctgaagactctcatcctggacgcactc
aagaaggatagctccagacattccaaactggagaaggccgatatccttgagatgactgtg
aagcacctcaggaacttgcagcgacacaggatgactgctgcggtgaacacagacccgtcc
gtcctgggtaaatacggagccgggttcagcgagtgtgtcggagaggtcacccgcttcctt
tccacgtgtgacgggatgaatacggaggtgaggactcgtctccttggccacctggcgtcc
tgcatcacccaaatcaacgctgtgaacctctgcacgcctcacccagttgccccgggaccg
gcacagaccggtgcacagatcacagccgcctcggctccactgacgccttccaaaagcgtc
tcgtcaatgcacgcttccccagaagcgataaagctgtacggtggcttccaggtggtgccg
acaagggatggacagtttgcttttcttgttcccggcacagcgctcctgcctcaaaacagt
catgccgtgtcacctgttgcaccccgggtcaccctggaccctgtgtggagaccctggtag
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