Gasterosteus aculeatus (three-spined stickleback): 120816279
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Entry
120816279 CDS
T07457
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120816279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120816279
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120816279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
120816279
NCBI-ProteinID:
XP_040027733
LinkDB
All DBs
Position
III:complement(5999280..6023838)
Genome browser
AA seq
2536 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGAQNKLEKFVTELRNANEEQRNANEELRRQRERLEADSEQQ
YFDIDKRLAESQEQILSATKDVQTLKEENKKLNEELSSLKGIEGETAEDKPPQQQTKAKY
ELEAEKRELERLLEKRKQEVENLTDDMKRLNEKLTETSKVKTELQLKLDGLQSSEASVQH
REKRMEQEKELREKKIEWLTAELKAKTEELLNTNREKGKEILELQACLKNSKEQVTRLEG
QLTSLKQTSEKQNERGEDLNNKLKQAKDEQSAMEEKYRNELNAHVKLSSLYKLAATDLET
RNQELSRAVEELSKLVKDSGEANKTLEKKTSDMAELNTRLEAELTEKIKNMEKELETATV
KASGKHCCAPSLTEEQLDAMCPSAAAISAIVKPAMKFFDLYNAYAECQTQLQLEKQETRR
VSRVLDEIVLEVESKAPVLKRQREEYESMKRSMTSLCNKLEQARTEIYSLQKEKEEAKQR
CDSMEREKLRTERQLEDTSTQVCSLLVELEEARGNQVTREDGTSANISSTSEVTSPRQLS
FRSVEELQRQNQSLLKQLRELEEEKERQQSQVASARVSELEAGVDKLQKEVEQLKEQRNQ
QKQLADSSARQRDMYKTLLTQSTGFSLPPQGPESSSHPAPVRPPLPATRAAPQRAAAESA
QTAQANAALKQLSDSFALYKKEKAENDRMLNETNERLQKQLTDLRSSHAKLTSQLEFSSK
RYEMLQDNVSAYRREICALQERNQKLSATAQQHEHVIHTMSQDLRQANEKLALEEVRVEN
FTKERDMLRQAESRLSREKEAVLAEQQNQNLLLTNLKSIQLTMERTESLTRQRLNDKIEH
LEAEVASMKTRLDQEVAQKHALGRTMDAQLLEAKKQLETQNTLQQKTRELLRGAEQQVVA
LKAQLASASSSEAVAATGNASTPAPRAAALRAPLRVRSPVPTPVSQQLSQSEQELAEVKS
SLRTAEEQKGELMEQLKNANATVEQYKAVVLTLEDSLKKEKESRCPLELRLKESGEVQKQ
LEKRILEAEKMKQQEREERRKAMDAVEKQVCELQRTLKSSQAEQQEALERAAAAVTMEQK
AIQDSQLQTKLAAEAQAKYERELMLHAADVEALQELKKRSQQNAAQRRELEEQLSKTSSL
LQEKTVALSATEKQLKEDLANKTRCCAELGKQNSLLHQQMDEMASRSRQQRSQQEQQLDL
SFTEEGKTTEQILEILRFVRREKEIALAQCEASDREALRYKQRVEHQDRELKELQEALNA
EREKMQATAKTLAQQQEQLKEMETVSTLQETTRMLKMDRDKLEQELLQAQAKVSKLQSDI
SPLHHSLSMLSEKNGSLQADKRILEEDLKRWKAKTQQLVSQQKDGDVEERQKLTTEREAQ
QRRITQLAEETGKLKTELARSSASSNSAQSQLQAFRDSVARLTSERDTLKKDMEAKNKDI
LEKNKTITQVKKIGRRYKTQYDELKAQHDKLVEETAAKAGFEAGPNQETQREVTKAQEEL
RRAAEELNTLKEEARKRLEEAQKNQQELQEAKKEIQQSKEKFQEVQNQLTQVQSQLSQTQ
AQQQQNQNQLTQSQKELQQAKSHSQQVQNQLKSAQSLAQNRHNQNQQIQRELQQAKEALQ
QNVTNQKELQQTHQSSQQSHNQEVINLKAALSQAESKVTELQSRMDNQQKLVGEHEADIK
RLQEQLKEANQANEASRAKPASQGSQSNQPCEASAASDANKALQEELSKLRQELSDSKRI
EEQLRQQIAEKEEKTKKVFMGAKTKINQLNSAKEQLNREIEEVKQSKDELEVRMSALKSQ
YEGRLLRLDRELRELKESQAQPEPREEPLDQSGAKGGDQARSADQRQISLKNPAQDRGSS
SQCDPPTANIRPTTSTPSPSNKPSPSSGSKATPRASIRPMVTPVTIPVPTPTATVMPTTQ
NDSQEALISSGVPVHSTGSSLANTSISQPTSAQNTAFVQPTQQQAANQDAGPSMEAERPS
TSSSLSGTAGSKRGREEGDEEEESSRPETSHTPPTSKKLRLKPTTMMQMEGDEEIEGEGQ
DSPDDSQEPPEDCFPVSVEEHQDIEEEGVSQSVPSDLMSSQDSAIIREVIVIDTDSESHE
SKEGEEQPQQEEEDEEQQQEEEDEDKEEEDEEEEEEDDNDTYKEEGDEDEDDSGDSGIRG
EEDDNNEESREADQEGGEGEPSEASNLEETTCRDSQRPSEASHSNEGSSGATSESDAPGD
LVHFPPTSSAPSPSPSPASSLTPRLPHPRRPPHPLPPRLYIQPPELGPPHTQRQSSQLRR
PSVGRGPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRF
GPPEDLLPQTSASHSDLGQLASQGAVCEGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAA
PVTVFTESLPSDSCDNMASQSVPMVTTSTGMASAADDGDEVFMEQDGEGPGTEPSLENQT
DMDSTGQQSDDSSLPSTSHDPDTSSATQRRTVPTLMSIPPARGTRGGRMEARTPLSRRGT
FFRGGRGGAVGRGGFA
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcctgcttcaggttctggagcggacggagttgaataagctcccgaaaggc
gctcaaaacaagctggagaagtttgtaacggagctgcgaaatgctaacgaggagcagcgg
aatgctaacgaggagctgcggaggcagcgcgagcgcttggaagcggacagcgaacagcag
tattttgatattgacaagaggctggcggagagtcaggagcagatcctgtctgccacgaaa
gacgtgcagaccctcaaggaagaaaataaaaaactcaatgaagaactgagcagtctgaag
ggaatcgagggagagacggctgaagataaaccaccacaacagcaaacaaaggctaagtat
gagcttgaggcagagaagagagagctggagaggctgctggagaagagaaagcaggaggtg
gaaaacctcactgacgatatgaaacgactgaatgagaagctgacagagaccagcaaagtg
aagacggagctgcagctcaaactggatggcttacagtcatctgaagcttctgtgcagcac
cgagagaagcgcatggagcaggagaaagagctgcgtgagaagaagatcgagtggttaacg
gcagaactgaaggccaaaactgaagaactattgaacaccaacagagagaaaggaaaggag
atactggagttgcaggcgtgtctgaagaacagcaaggagcaggtgaccagattggagggg
cagctgacctcgctgaagcaaaccagtgaaaaacagaatgaaagaggcgaggacttgaac
aacaaactcaaacaggctaaagacgagcagagtgccatggaggagaaataccgcaacgag
ctcaacgctcatgtcaagttgtcttccctctacaagttggcagcaacagacctggagaca
aggaaccaagagctgagcagagctgtagaagagctcagcaagctggttaaagactctgga
gaagccaataagaccctcgaaaagaagacgtccgacatggcggaactaaatacgcggttg
gaggcggagcttacagagaagatcaagaacatggagaaggagctggagaccgccacggtg
aaggcttctggaaaacactgctgtgcgccctctctgaccgaggagcaattggacgccatg
tgtccatcggcagcagccatttctgctatagtaaagcccgccatgaagttctttgatctg
tacaatgcgtatgcggaatgtcagacgcagcttcagctggagaagcaggagaccaggagg
gtgagccgagttctggatgagatcgtcctggaggtggagtccaaggccccggtcctcaag
cgccagagggaggagtacgagagcatgaagaggtccatgacctccctgtgcaacaagcta
gagcaggctcgaacggaaatctacagtttgcagaaagaaaaggaggaggccaagcagcgc
tgtgacagcatggagagagaaaagctgaggacggagagacagctagaggacacatctaca
caggtctgctctcttctggtggagctggaggaagcacgaggtaatcaggtgactcgggag
gacggcacctccgccaacatatccagcacttctgaggtcaccagtccgcgccagctgtcc
ttccgcagcgtggaggagctgcagaggcagaaccaaagcctactgaaacagctgagggag
ctggaggaggagaaggagagacaacagagccaagtggcatcagcgcgcgtgtcggagttg
gaggccggcgtggacaagcttcagaaggaggtggagcagctgaaggagcagaggaaccag
cagaagcagctggccgactccagcgccagacagagggacatgtacaagaccctgctgacg
cagagcaccggcttcagcctgcctcctcaaggtcccgagtcttcatcccaccccgcaccc
gttagaccgccgttgccggctactcgcgctgctcctcagagagccgccgccgagtcggcg
cagaccgctcaggccaacgctgccttaaaacagctgagcgactccttcgccctgtacaag
aaggagaaggccgagaacgaccggatgttgaacgaaaccaacgagcggctgcagaagcag
ctgacggacctccgctccagccacgccaagctcacctcgcagcttgagttcagcagcaag
aggtacgagatgctccaggacaacgtgtcagcctaccgtagagagatctgcgccctgcag
gagaggaaccaaaagctgtctgccacggcccaacagcacgagcacgtcatccacacgatg
agccaggacctgcggcaggccaacgagaagctggcgctggaggaggtgcgcgtggagaac
ttcaccaaagagagagacatgttgagacaagcagagagtcgactgagtcgagagaaggag
gccgtgctggctgagcaacagaaccagaacctgctgctgaccaacctcaagtccatacag
ttgaccatggagcggaccgagtcgctgacccgccagcggctgaacgacaagatcgagcat
ctggaggcagaagtggcttcaatgaagaccaggctggaccaggaagtggcacagaaacac
gccctggggcgcacaatggatgcccagttgttggaagcaaagaaacagctggagactcag
aacaccttgcagcagaagaccagggagctgctgcgcggcgctgagcagcaggtggtggcg
ctgaaagcccagctggcctctgcatcgtcctctgaggccgtggccgccaccggcaacgcc
agcacaccggcccccagggccgcagccctcagagcaccactccgagtacgctctcctgta
ccaactcccgtctcccagcagctcagccaatcagagcaggagcttgccgaggtgaaaagc
tccctccgtactgctgaagaacaaaagggcgagctgatggagcagctgaagaacgctaac
gctactgtggagcagtacaaggctgtggtgctgactctggaagacagtctgaagaaagaa
aaggagtcccggtgtcctctggagctccggctgaaggagtctggggaggtgcagaagcag
ctggagaagcggattttagaggcggagaaaatgaagcagcaggagcgagaagagaggagg
aaggccatggacgctgtggaaaaacaagtgtgtgagctgcagcgcacgctgaagtccagc
caggcagagcagcaggaggcgctggagagagctgctgctgccgtcacaatggagcagaag
gccattcaggacagccagctgcagactaagctagctgcagaggcgcaggccaagtacgag
cgggagctcatgctccatgctgcggacgtggaggccctgcaggagctgaagaaaaggtcg
cagcagaacgcggcgcagaggagggaactggaggagcagttgagcaagacctcgtccctc
ctgcaggagaaaaccgtagctttgagcgcaactgagaaacagctgaaggaggatctggcc
aataagacgcgttgctgcgcggagctggggaagcagaactctctcctgcatcagcagatg
gatgagatggcctccaggagtcgtcagcagcgaagccagcaggagcagcagctggacctg
tcgttcactgaggaggggaagaccaccgagcaaatactggaaatactccggtttgtgcgg
cgtgagaaggagatcgccctggctcagtgcgaggcctccgacagagaagctcttcgctac
aagcagcgagtggagcaccaagatagagaactgaaggagctgcaggaggccctgaatgcc
gagagggagaaaatgcaggctacagcaaagactctggcccagcagcaggagcagctgaag
gagatggagaccgtcagcactctgcaagaaaccacccggatgctgaaaatggaccgagac
aaactggaacaggagctcctgcaggcacaggccaaagttagcaagctgcagtccgacatc
agcccgctacatcactccctgtccatgctgtctgagaagaatggctccctgcaggctgac
aagaggatactggaggaagacctgaagcgctggaaggccaaaacccagcaactggtcagc
caacagaaagacggcgatgtggaggagcggcagaaactcaccactgagagggaagctcag
cagagacgcatcacacagctggctgaagagacgggcaagctgaagacggaactggcgaga
tccagcgccagcagtaactcggctcagtctcagctgcaggccttcagagactctgtggcc
cgtctgacgtctgagagagacactctgaagaaagacatggaggccaagaacaaggatatt
ctggagaagaacaagaccatcacccaggtgaagaagattggacgacgctacaagactcag
tacgacgagctcaaagcccaacacgacaagctggttgaggaaactgctgctaaagcagga
tttgaagcaggaccgaaccaggagactcagcgggaagtgactaaagcccaggaggagctc
cgacgggccgcagaggagctgaacacactgaaagaggaggcgcggaaaaggctggaggag
gcccagaagaaccagcaggagctgcaggaggccaaaaaggaaatccagcaaagcaaggaa
aagttccaggaggtccagaaccagctgacgcaggtccagtcccagttgtctcagacccaa
gcgcaacagcagcagaatcagaaccagctgacccagagtcagaaggagcttcagcaagca
aagagccacagccagcaggtacagaaccagctgaagtcagcgcagtctctcgcccagaat
cgtcacaaccagaatcagcagatccagagggagcttcagcaggctaaagaggcccttcag
cagaacgtcacaaatcagaaagagctgcagcagacccaccagagcagtcaacagagtcac
aaccaggaagtcatcaacctcaaggcggctctcagccaagccgagagcaaggtgactgag
cttcagagccgcatggacaaccaacagaagctggtgggcgagcatgaggcagacatcaag
cgtctgcaggagcaactcaaggaggctaaccaggctaatgaagctagccgggcaaagccg
gccagccagggttcccagtccaaccagccttgtgaggccagcgctgccagtgacgctaac
aaagcgctccaagaggagctgtcaaaactcagacaagagctgtctgacagcaagagaata
gaggagcagctccgacagcagatcgctgaaaaagaggagaagacaaagaaggtcttcatg
ggagccaagaccaaaatcaaccaactaaacagtgctaaggagcagctaaatagggagatc
gaagaggtgaaacagagcaaggatgagctggaggtgaggatgagcgccctcaaatcgcag
tacgaaggacgtcttcttcggctggacagagaactgagggagctgaaagagagccaagcg
cagccggagcccagagaggagccactggaccagagtggagcgaaggggggtgaccaggcc
agatctgcagaccagagacagatatccctgaagaatcccgcccaggacagaggaagttcc
agccagtgcgacccccccactgccaacatccgccccactacaagcactccgtctccgagc
aacaaacctagcccctcctctgggagcaaggccacaccccgagccagcatccggccaatg
gttaccccggtaaccatccccgtcccaacacctacagccactgtcatgccgaccacacag
aatgacagccaagaggcgctgattagttcgggagtccctgtacactccaccggctccagt
ctggcaaacacgtcaataagtcagccaaccagcgcccagaacacagcttttgtccagccc
acccagcagcaggcagccaatcaggacgcaggccccagtatggaggcagagcgaccgtcc
acgtcgtcctccctgagtggaacagccggttcaaagcgtggcagagaggaaggggacgag
gaagaggagagttccagaccagagacttcacacacaccaccaaccagcaaaaaactacgc
ctgaaaccaacaacgatgatgcagatggaaggtgatgaggaaattgaaggagaaggacag
gattcacctgacgacagtcaggaacctccggaggattgtttccccgtgtcggtcgaagag
caccaggacatcgaggaagaaggcgtgtcccagtctgtcccctccgatctgatgtcctct
caggactccgccatcattcgggaagtcattgtgatcgacacggacagtgagagccacgag
agcaaagagggggaggagcagccgcagcaggaggaggaggatgaggagcagcagcaggag
gaggaggatgaagataaagaggaggaggatgaggaggaggaagaagaagacgacaacgac
acgtacaaggaggagggcgatgaagacgaggatgattctggtgacagcgggattagggga
gaagaagacgacaacaacgaggagagcagggaggcagatcaggagggaggggagggcgag
ccgtcagaagcctccaacctcgaggagacaacgtgccgtgactcgcagcgtccctctgag
gcgtcgcacagcaatgagggaagcagtggcgccacatcggagtccgacgcccccggagac
cttgtgcactttcctccgacctcctctgcaccctctccctccccttcccccgcctcctcc
ctcacgccccgcctcccacacccacgtaggcccccgcacccgctgccaccgcggctctac
atccaaccgccggagctggggcccccgcacacacagagacagtcctctcagctgcgcaga
ccctcagtaggacgtggacctcaactgacccctggaataggcagtatgcaacatttcttt
gacgatgacgacagaatggttcccagtactcccactctggtggtcccacaccgcacggat
ggctttgcagaggctatacattctcctcaggtcgcaggtctgtccaccaggttcaggttt
ggacctccggaagacctgctgcctcagacgtccgcctcacactctgacctgggacagcta
gcctctcaaggagctgtgtgtgaaggtctggggatgtacgagtcccctctgttcctggct
gctcacgatgaagacggaggaggaaggagtgtccccaccacaccgttacaagtggctgca
ccagtgacggtcttcacagagtctctaccctcagacagttgcgacaatatggcgtcccag
tcggttcccatggtgaccacctccaccgggatggcatctgctgctgatgatggtgatgaa
gtcttcatggagcaggatggagaggggcctggtacagaaccctctttggagaaccagaca
gacatggactcaacagggcagcaaagtgatgactcgtcactgccgtctaccagccacgac
cccgacaccagcagcgccacccagcggcgcactgttcccactctgatgagcatcccgccg
gccagggggaccaggggagggaggatggaggccaggacgccactcagccgcagaggcact
ttctttcgtggagggaggggcggagccgtgggcagaggcggctttgcctga
DBGET
integrated database retrieval system
