Gasterosteus aculeatus (three-spined stickleback): 120816316
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Entry
120816316 CDS
T07457
Symbol
aire
Name
(RefSeq) LOW QUALITY PROTEIN: autoimmune regulator
KO
K10603
autoimmune regulator
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120816316 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120816316 (aire)
04121 Ubiquitin system [BR:
gat04121
]
120816316 (aire)
Transcription factors [BR:
gat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
120816316 (aire)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120816316 (aire)
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Paralog
GFIT
Motif
Pfam:
HSR
PHD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
120816316
NCBI-ProteinID:
XP_040027788
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All DBs
Position
3:1692457..1696981
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AA seq
560 aa
AA seq
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MSRTGALGDTNLRSLLRELRTDIAMAVDDPFPLLYGLVDKNILTDQLFKDTLEKEGREGI
HKAMYSLLSWLLEQRRSTIQAFWSNLSKDYNLDSYPKLQTLLTKLQSRQDAASSRAERSS
SGGLKPPHIKKRNHRERETSSQTLHPQYHAETSDRPGGKVKLYRVKSEAAASKLTSANNV
LEVSSSVQRPVTLGSSLTEPAVSHAATETHIRQMLDSDGSARKVVGEFYSEESRAVDNKL
PRKGETTAGTVEDPPSIHSLKVGHSVGPFQGVCIHLCAFCIPESLGSCNDDECAVCKDGG
ELICCDGCPRAFHLTCLDPPLTSIPSGTWRCECCSGNTVKRENAPVSFQVSISKVYMDCS
FLCLIYLIYVNCYSFVSSRVTHMIFFVSLFCTAFSLLYFMPQPLDALQKNTSNPIVDVSF
FSSLPSSPLTCATASMNELRSQGPAGELLAVREVCGVCCVEGGELTHCLQCLQRFHVHCH
FSKGRSICSSCSRPWSASAEKEAETSRSLQLIHEQQSSSPEGVLHKDELDSILGDCSIDI
LQWAFHNISRPHPDLQGCFK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaacgggagctcttggggacacgaaccttcgctcgctgctgagggagctgcgc
actgatattgccatggctgtcgatgaccctttccctctcctttacggtttggtggacaaa
aacatcctcaccgaccaactatttaaggacacgctggagaaggaaggtagagaagggatc
cataaggccatgtactccctcctctcctggctcctggaacagagaagatccaccattcag
gctttctggagcaacttgtccaaagactacaacctggacagctaccccaagctgcagacg
ttgctcactaaactgcaatccagacaggacgccgcgagttccagagcagagagaagctcc
tccggaggcctcaaacctcctcacattaagaagaggaaccacagggagagagagaccagc
tcacagactctgcacccacagtatcacgccgagacgagtgatagaccaggcggtaaagtg
aagctgtacagagtgaaaagtgaagctgcggcctcaaagctgacgtctgcaaacaatgtt
ctggaggtttcgtcttccgtccagagaccggtcacgctgggttcctcattaaccgagccg
gcagtcagccacgcagccacagagacccatatcagacagatgttggactcggatggaagt
gccaggaaggttgtcggggagttttactcagaggagtccagagctgtcgataacaagctt
ccccgcaagggggagacaaccgccggcacggtagaggatccgccgagcatccactcgttg
aaggtcggtcactccgtcggccctttccaaggtgtgtgtattcacctttgtgcgttctgc
attcctgagagcttagggtcatgtaatgacgatgagtgtgcagtgtgcaaggacggaggg
gagctgatttgttgcgatggctgtcctcgagcttttcacttgacctgcctggaccctccg
ctcacatccataccgagtggcacttggcgttgtgaatgctgcagcggaaacacagtgaaa
agagagaatgcgccagtatcttttcaggtaagtatcagtaaggtttacatggactgttca
ttcttatgtttaatttatttgatttacgttaattgttattcatttgtttcttccagagta
acacatatgatattctttgtttcactcttttgcactgcattttctcttctgtatttcatg
ccacagccactcgatgccctgcaaaaaaacacgagcaaccccatcgtggatgtttccttc
ttctcctcgcttccttcctcgccgctcacctgcgccacagcctctatgaatgagctcaga
agccagggcccggccggagagctgctcgctgtgagggaggtgtgtggtgtttgctgcgtc
gaaggcggagagctgactcactgcctccagtgtttgcagcgcttccacgtccactgccac
ttctccaaaggccgatccatctgctcgtcctgctcccggccctggagcgcctctgcagag
aaggaggctgaaacatccagaagcttacagctcatccatgagcagcagtcttcttcccct
gagggcgtcctccataaagatgaactggactccatcctgggagactgctccattgacatc
ctgcagtgggctttccacaacatctctcggcctcatccagacttgcaaggatgcttcaag
tga
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