Gasterosteus aculeatus (three-spined stickleback): 120816368
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Entry
120816368 CDS
T07457
Symbol
smg7
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120816368 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120816368 (smg7)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120816368 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
120816368 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
120816368
NCBI-ProteinID:
XP_040027850
LinkDB
All DBs
Position
III:17329605..17340542
Genome browser
AA seq
1183 aa
AA seq
DB search
MNVCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQGGGAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLV
PSNGQPYNQLAILASSKGDHLSTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKT
KWSVSDFVRAFIKFHGHVYLSKSLEKLDLLREKLEEQFQRLTLQKAFSSQQLVHITVINL
FELHHLRDLTAEGSEQIFNGEQQVGWFQLLGLFMSFLGVMCSRVILNNSRGEEIMGECPL
PAIKVSLDWLKLRPSIFPEAAMDQRQHVWPWLVSILNSFQPREDTVSFSSVTPLPEEFEL
QGFLALRPALRSLDFTKGHQGVLVDRDGLPVHTRHQRLISLGRWVADNQPGLIQCKVSED
GLLVFITDIPEQAVEEPLEKETPVLQESSNAEQTANDGGNCGLKSVLSAGKTQSSWPDGS
ERPVVTFKENIKPREQSREPTRSLPLKDSGKERRDFTKGNAAAGKGEPKRDGKRKSELKK
AGHEKAADAVKQVKAQTEMRKTPVPEAKKTPVTQMQTTCSSQFIPTIHHPGAFPPLPSRP
GFPPSAYVIPPPVAFPGLQVNPGFTFPAGVTVPGAFLQPGVHTQTAGQSGKPSHIPYSQQ
RPSGPGPGQGPGSSCPPQGQQPQNQAMQSVQLQAMSQQSPTKPVQQVGMGKSPPHHPGLQ
QFMQVQDQPAQMWNQAQAALQKIPPVPMSMKQPQQQQQQAAFYMAAQDPLKLYEHQMDKK
MKFPNVKIQDFYWEPTYRVGDGLAVMADRMKRPPPGGICPEQDGSTGPRGPPFEDNKPLL
PPDLLKSLADLEEEEEELVFSKPPDFFQALAGPLSSAPGPNLFLPNQTRMESGAEVVSSS
LLPMSGFPMQEYNQNSIFSQAYGKSLPPCSKPDAPMMHQEPSLYSLFEGTPWSPSLPASS
DHSTPASQSPHSSNPSSLPSSPPTHNHGAVPFSNFGPIGTPDSRDRRMVDRWKADKTGAV
SGFGLDYLPAPPSSAASDTSWHQAGPTGNSWTNQESPMEESSSTVLLDSLKSIWSSSMMH
LRQWILKRSGFSRSRISTSSGPMSIRIDRRAPEKTIISSTLQP
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtgcgctcagtatctccgacaggcagaggccctgaaggctgacatgacagat
tcaaagctgggggcggcggaggtgtggacgtcccgacaggccctgcaggatctgtaccag
aagatgctggtgacagaccttgaatacgctctggacaagaaggtggagcaagacctgtgg
aatcacgcctttaagaaccagatcaccacgctgcagagccaggccaagaaccgagccaac
cccaaccgcagcgaggtgcaggccaacctgtcgctgttcctggaggcagcgagcggcttc
tacacacagctgctacaggagctgtgcaccgtcttcaacgtggacctgccgtgccgcgtc
aagtcgtctcagctcggcatcatcagcaataaacagggcggcggcgccatcgtcacaccg
caacccagctcctgctcctacatctgccagcactgcctcgtccacctgggagacatcgct
cgttaccgtaaccagaccagccaggcggagtcgtactaccgacacgcagctcagctggtc
ccgtccaacggtcagccctacaaccagctggccatcctggcctcctccaaaggagaccac
ctcagcaccatcttctactactgccgcagcatcgcggtcaagttccccttcccggccgcc
tccaccaacctgcagaaggctctgtccaaggctctggagagccgcgacgaggtgaagacc
aagtggagcgtgtctgacttcgttcgggccttcatcaagttccatggccacgtctacctg
agcaagagtctggagaagctggacctcctgagggagaagctagaggagcagttccagaga
ctgaccctgcagaaggccttcagctcccagcagctggtccacatcacagtcatcaacctg
ttcgaactccaccacctcagggacctgacggctgaaggcagcgagcagatcttcaacggc
gagcagcaggttggctggttccagctgctgggcctcttcatgtccttcctgggagtcatg
tgcagccgcgttatactcaacaacagccgcggggaggagatcatgggggagtgtcctctg
ccggccatcaaggtttctctggactggctgaagctgagacccagcatcttccccgaggcc
gccatggaccagaggcagcacgtttggccctggctggtctccatcctcaacagtttccag
cccagagaggacaccgtgtccttctcctcggtgacgccccttccagaggagtttgagctg
cagggtttcctggctctccggcccgctctgaggtccttggacttcaccaaaggtcatcag
ggcgtcctggtggacagggacggcctgccggtccacacccgacatcagagactcatcagt
ttgggcagatgggtggccgacaaccagccggggctgatccagtgcaaggtgagcgaagac
ggcctcctcgtcttcatcaccgacattccagagcaggccgtcgaggagcccctggagaag
gagacgccggtgctgcaggagtcgtccaacgccgagcagacggccaacgacggcggcaac
tgcggcctgaagtcggtgctgtcggcggggaagacgcagagctcgtggcccgacgggagc
gagcgacccgtcgtcaccttcaaggagaacatcaagcccagggagcagagccgagagccc
acgcgcagcctccccctgaaggacagcggcaaggagcgccgggacttcaccaagggcaac
gcggccgccgggaagggagagccgaagagggacgggaagaggaagagcgagctgaagaag
gccggacacgagaaagccgctgacgccgtaaaacaggtgaaggcgcagacggagatgagg
aagactccggtccctgaggccaagaagactcccgtcactcaaatgcaaaccacctgctcc
tcccagttcatccccaccatccatcacccaggagccttcccccccctgcccagccgacct
ggtttcccaccctcggcctatgtgatcccgcccccggtggcatttccaggcctccaggtg
aaccctggctttactttccctgctggagtgaccgtccccggtgccttcctccagccgggc
gtccacacccagaccgccggccagtccgggaagccttcccacattccttacagtcagcag
aggccctctggtcccggcccgggtcagggcccggggtcctcctgccccccccagggtcag
cagccccagaaccaggccatgcagtcggtgcagctgcaggcaatgagccagcagtctccc
accaaaccggtccagcaggtcgggatgggcaagagtccacctcaccacccgggtctgcag
cagttcatgcaggtccaggatcagccggctcagatgtggaaccaggctcaggccgctctg
cagaagatcccccccgtgccgatgtccatgaagcagcctcagcagcagcagcagcaggcg
gccttctacatggcagctcaagatcctctcaaactctacgagcaccagatggacaagaag
atgaagttccccaacgtgaagatccaggacttctactgggagcccacctacagggtgggg
gacggtttggctgtcatggcagacaggatgaagaggcctcccccgggggggatctgcccc
gagcaggacggctccaccggccccaggggccctccgtttgaggacaacaagcctcttcta
cctcctgacctgttaaaatctctagcagatcttgaggaggaggaggaggagctggtcttt
tctaagcctcctgatttcttccaggccttggccggtcctctgagctctgctcctggacca
aacttatttctgccaaaccagacccggatggagagcggcgccgaggtcgtctcctcgtct
ctgctgcccatgtccggcttccccatgcaggagtacaaccagaacagcatcttcagccag
gcctacggcaagagcctgccgccctgctccaagcccgacgctcccatgatgcaccaggag
ccgtccctgtactcgctgttcgaggggaccccctggtccccctccctgcccgccagctcc
gatcactcgacccccgccagccaatcccctcactcctccaaccccagcagcctgccgtct
tccccccccacgcacaatcatggcgctgtgcccttctccaactttgggcccatcggcact
ccagacagccgggaccgcaggatggtggaccgctggaaggccgacaagaccggggctgtc
agcggcttcggactggactacctgccggccccgccctcctctgcagcttcagacaccagc
tggcaccaggccgggccgaccggcaactcctggaccaatcaggagtctccgatggaggag
tcgtcctccaccgtgctgctcgacagcctcaagtccatctggtcgagctccatgatgcat
cttaggcagtggattctgaagcgctctgggttcagcagaagcagaatcagcactagttca
ggccctatgagcatacgtattgatcggcgtgccccagagaagacgatcattagctccaca
cttcagccgtaa
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integrated database retrieval system
