Gasterosteus aculeatus (three-spined stickleback): 120816410
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Entry
120816410 CDS
T07457
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gat03032
]
120816410 (pif1)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120816410 (pif1)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120816410 (pif1)
DNA replication proteins [BR:
gat03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120816410 (pif1)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
120816410 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
Herpes_Helicase
Mg_chelatase
UvrD_C_2
DEAD
AAA_16
AAA_7
RsgA_GTPase
ABC_tran
AAA_5
PhoH
NACHT
Motif
Other DBs
NCBI-GeneID:
120816410
NCBI-ProteinID:
XP_040027929
LinkDB
All DBs
Position
III:8701566..8707313
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AA seq
633 aa
AA seq
DB search
MLGEEDGGAQLQCCATVEQLNTSGQATRRQVIRKASVVLGRNEFNEIILRVHDGKIPQNY
RLKEFKLFTKFAREGKCTVKLLPENTQVLLSNCPPDRLNLFLKTLSIKHQARLSSKPMTD
REKLKAGLPRSFEAISPLQQKDIQKINELRSKVDPKGLVDRTNRTVAGTGQQVKRSRCDT
NFSPSKGNPSKKPILCLPSRKLSKEQAAVLTAVLSGRNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAASHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEVSMVDAQFFDKLESVARSVRRSTEPFGGIQLIVCGDFLQLPPVSKGKEKASFCFQARS
WRKVIQVNIELMEVRRQTDQSFISLLQAVRVGRVTEDVTTKLMDSAYHLIERDGILATRL
CTHKDDVDLTNENKLQQLPGSARVFEALDSDPALVKTIDAHSPVSRLIQLKVGAQVMLTK
NLDVARGLVNGARGVVLAFESGKHGLPRVHFLCGATEVLKPERWVFKSGGGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRVVRADP
DVLIFYKKLRKERLLMQASMDDFLGNSNKENPW
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagaggaggacggtggagctcagctgcagtgctgcgcgacggtggagcagctg
aacacctccggtcaggcgacccgcaggcaggtcatccgaaaggcctccgttgttctgggc
cgcaacgagttcaacgagatcatcctgcgggtccacgacgggaaaatcccgcaaaattac
cgcctcaaagaattcaagctttttacaaagttcgccagagaagggaagtgcaccgtcaaa
ctgctccctgaaaacacccaggtactcctctccaactgcccccctgaccgcttgaacctc
ttcctcaaaaccctgagcatcaaacaccaggcccggctgagcagcaagccgatgaccgac
cgagagaagctcaaagccggtcttccccgcagcttcgaggccatcagccccctgcagcaa
aaggatatccagaagatcaacgagctgaggagcaaagtggaccccaaagggctggtagac
cgcactaatcggacggtagcaggcacaggacagcaggtcaaaaggtcaagatgtgacacc
aacttcagcccatcgaagggaaaccccagcaaaaagcccatcctgtgtctgccctcacgt
aagctgagtaaagaacaggccgctgtcctcactgctgtgctgagcggcaggaacgtcttc
tttactggaagtgcaggtacaggaaagtccttcttattgaagagaatcatgggatctctt
cctccaaaaagcacatttgccacagccagcacaggagtggctgcatctcacatcggagga
acaacgttacacaactttgctggtattgggtccggctccgcccccctggagcagtgcatc
gagctggcccagaggcccggggtgctgcagcactggaccagctgcagacacctcatcatc
gatgaggtctcaatggtggacgcccagttctttgacaagctggagtctgtggcaaggtcg
gtgaggaggtcaactgagccgttcgggggcatccagctgatcgtatgtggagacttcctc
cagctgcctcctgtttctaagggaaaggaaaaggccagcttctgcttccaggccaggagt
tggcgtaaagtcatccaggtcaacattgagctaatggaagtgcggcgtcaaactgaccag
tccttcatctccctcctgcaggcagtgagggtgggcagggtgactgaggacgtcaccact
aagctgatggacagcgcgtaccatctcattgagagggacggcatcctagcgaccaggttg
tgcacacacaaggacgatgtggatctcacaaacgagaacaagctccagcagctgccaggg
tcagcacgtgtctttgaagcactggacagcgacccagcactggtgaagaccatagacgcc
cacagccccgtcagcagactgatccaactcaaagttggggctcaggtcatgctgacgaag
aacctcgatgtcgcccgaggtctggtgaacggagcgcgaggggttgtgttggcttttgag
tctggaaaacatggactcccacgtgtgcatttcctctgcggtgccacggaggtgctgaaa
cccgagcgctgggtgtttaagtctggcggtggcatccacctgagtcgacaacagctgccg
ctgaaactggcctgggccatctccatccacaagagccagggcatgacactagactgtgtg
gaaatctctctcgctcgggtgtttgagagcggtcaggcttacgtagccttgtctcgggct
cgaagcctggaaggtctgcgggtgatggactttgacccccgcgtggtcagagcagatcca
gacgttctaatcttctacaagaaactgaggaaagagcgactgctgatgcaagcctccatg
gatgattttcttggcaacagcaacaaagagaacccttggtga
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