Gasterosteus aculeatus (three-spined stickleback): 120816504
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Entry
120816504 CDS
T07457
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04261
Adrenergic signaling in cardiomyocytes
gat04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120816504
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120816504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120816504
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120816504
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
120816504
NCBI-ProteinID:
XP_040028085
LinkDB
All DBs
Position
3:complement(138788..171949)
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AA seq
1958 aa
AA seq
DB search
MAAMLLPTGPDGLRRFTRESMAALEQRIAQERAKEAKEAKEAKEAKDCPAAHRHAEPSKP
RIDLEAGKQLPRIFGEIPTELIGVPLEDIDPFYYKNQRTFIVLNKGKAIFRFSATYAVYV
FSPLHFIRSIAIKILVHSLFSLFIMFTILTNCFFMAMSDPAPWTKYLEYTFTGIYTFESA
IKILARGFCIMPFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVI
PGLKTIVGALIQSVRKLADVMILTVFCLSVFALIGLQLFMGLLRQKCIRSLAHCVNSSFS
PNASFLCNNRTWSSRADFLTSEDNFYKVEGAKDALICGYGSDAGKCPDGFDCLKIGRNPN
YGYTSFDTFGWAFLGLFRLMTQDYWEKLFHQTLRSAGKTYMVFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATIAEAWQKEREFQLAMEHLRTEQRLAAKRLKAQDTDSVLSPELSPVC
LKTGSIRRNSSRRRRSHRPLSEETAEEAAEEKFDPLDEPMPSLSPLPVHPLLATLSSHPL
STRRGSQVSVFSAFRAHNNSEADFGDDEYSAHGDAFRSRTSSTATPWKRRAGSVRSHCSQ
IFGPSLNVNGRLNISIDQNGITTLGLHTPTSMPAHSMERVKEDTKFTGVEDTVPRLFLQP
SPTVTEPPPVQRKRGLSSVSFFSDAMGELEVSRQKCHPCWYRFAKRYLIWDCCPWWLKMK
DWVKCMVMDPFLDLGITVCIVLNTLFMALEHYPMTEEFNTMLSVGNLVFTGIFTAEMVLK
LIAMDPYYYFQQGWNIFDGVIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNT
LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYQDCVCKISIDCQLPRWHMKDFF
HSFLIVFRVLCGEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVVLNLFLALLLSSFSSD
NLSAPEEDGDLNNIQIAIARIQSGVSWLAACVVDLFNRSLKCRKQKVNQAVKPVGNHIES
NGGIFGRYGEKYFVPEEDSYMTNPKLTVIVPIAPGESDVEFLEEEEVSESSEDEDNKPEV
ISLSEGSTVDLRKPGEEMDNLSEVAEESMEPVECFPELCTRHCHCCTVDTSRGLGRAWWR
LRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIEKRKVVKVVLEYADKIFSYIFVLE
MFLKWIAYGFKKYFTNYWCWLDFLIVDVSLISLVANSLGYSDFAAIKSLRTLRALRPLRA
LSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNRTGFIHSA
SVVNNKSECLSMNDTQFYWTKVKVNFDNVGLGYLSLLQVATFKGWMEIMHAAVDSRGVEE
QPIREINLYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQKRKLGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANFLQAFFFDLVAKQAFDIIIMMLIIVNMVTMMVETDEQSERK
ESILNKINLVFIVIFTTECLIKIFALRCYFFTVAWNIFDFVVIVLSIVGIVLADIIEKYF
VSPTLFRVIRLARIGRVLRLIRAAKGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGM
ANFAYVKKTDGLDDMFNFETFGNSMICLFQISTSAGWDNLLSPIMASSPEECDLRYVNTG
TNTRGNCGSPSMGIAFFVSYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFEMFY
EVWEKFDSEATQFIEFSMLSIFADTLSEPLRIAKPNRIKLISMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALKQQMEEKFMMTNPSKVSHEPITSTLRRRLEEVSATVIQRCYRRH
LVRRHMKQASYLYRQINYETAVDVENAPETEGLIASMMHHYGLVGLEIAQTTEDALLSSP
PSYDSVTRATSELSEVARSVYRGCELGEPAESYEETFL
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatgctgttaccaacgggtcctgatggcttgcgccggttcactcgcgaatcc
atggctgcgctggagcagcggattgcgcaggagcgggccaaggaggccaaggaggccaag
gaggccaaggaggccaaggattgccccgccgctcacaggcacgcagagccgtccaaaccc
aggatcgacctggaggccggcaagcagctgccacgcatcttcggcgagatccctacagaa
ctcatcggggttccactggaagacattgatccgttttactacaagaaccaaaggactttt
atagtacttaacaaagggaaggccatcttcagattcagtgccacatatgcagtttacgta
tttagtccattacacttcatcagatcaatcgccatcaaaattttagtccattcattgttc
agcttgttcataatgttcactatactgaccaactgtttcttcatggccatgtctgatccg
gcaccgtggacaaagtacctggagtataccttcactggcatttacacttttgagtcggcg
ataaagatattagcgagaggattctgtataatgccgttcaccttcttgagagatccatgg
aactggctggacttcagcgtcattctcatggcatatgtgacagaatttgtagaccttgga
aacgtctcagctttgagaaccttcagagtacttagagccctgaaaaccatctcagtcatc
ccaggtctgaagaccatcgtaggagctttgatccagtctgtgaggaaactggcagacgtg
atgatcctgaccgtcttctgcctcagcgtgttcgcgctcatcggcctgcagctcttcatg
ggcctgctgcggcaaaagtgcatccgcagcctcgcgcactgcgtcaactcctccttcagc
cccaacgcatccttcctctgcaacaaccgaacctggagctccagggccgacttcctcacc
agcgaagataatttttacaaagttgaaggagcaaaggatgccttgatatgcggatatgga
agtgatgcagggaagtgtccagatggatttgactgcctaaaaatagggaggaatccaaat
tatggctacaccagctttgataccttcggctgggcttttctcggcctcttccgactcatg
acacaagactactgggaaaaactgttccaccagacgctgcgttcagcagggaagacctac
atggttttctttgtgctggtaatcttcctgggctccttctacctggtcaacctcatcctt
gctgtagtggccatggcctacgaggagcagaatcaggccaccatcgctgaggcgtggcag
aaggagagggagttccagctggccatggagcacctccgcacagagcaaagactggcagca
aaaagactaaaagcacaggatacagactcagtgttgtccccagagttgtctccggtctgt
ctgaagacaggcagcatacgtcgaaacagcagcaggaggagacgatcacatcggccgctg
tcagaggaaacggcagaagaagctgctgaagagaagtttgacccactggatgagccaatg
ccgtctctgtctcccctccccgtccaccctctgctggccacactctcctcccacccgctc
agcaccaggagaggaagccaggtcagcgtcttcagcgcttttcgggcgcacaacaactcg
gaggctgacttcggggacgacgagtacagcgcgcacggggacgccttcaggagtcgcacc
agttcaacagcaacgccgtggaagaggagggcgggcagtgtgcggagccactgctctcaa
atcttcgggcccagcctcaacgtcaatggccggctaaacatctccattgatcagaatgga
atcaccaccctgggcctccacactcccacctccatgccggcacacagcatggagagggtc
aaagaagacacaaagttcaccggtgtggaagacacagttcccagactgttcctgcagccc
tccccgacagtgactgagccccccccagtgcagaggaaaagagggctgagctctgtcagc
ttcttcagcgatgccatgggggagctcgaggtgtcgaggcagaagtgccatccctgctgg
tacagattcgccaagaggtacctgatctgggactgttgcccctggtggctgaagatgaag
gactgggtgaagtgcatggtgatggatcctttcctggacctgggtatcaccgtatgcatt
gtgctgaacaccctcttcatggccctggagcactatcccatgactgaggagttcaacacc
atgctttcagtgggcaatctggttttcacaggcatctttacagctgagatggtgctgaag
ctgatcgccatggacccctactactacttccaacagggctggaacatctttgacggcgtc
attgtttgcctcagtctgatggagttgggtctttccaatgtggaggggctgtcggttctg
cgatctttcagactgttacgggtcttcaagctggcaaaatcctggcctactctcaacact
ctcatcaagatcatcggcaactcggtgggcgcgctgggaaacctcacgctggtgttggcc
atcatcgtgttcatcttcgctgtggtgggcatgcaactgtttggcaagaactaccaggac
tgcgtgtgtaagatctccatcgactgtcagctgcctcgctggcacatgaaggacttcttc
cactccttcctcattgtgttccgggtgctgtgcggcgagtggatagagaccatgtgggac
tgtatggaggtggccgggcagccgctctgtatcctggtcttcatgttggtcatggttatt
gggaacttggtggtgttgaatctttttctggcgctgctgctcagctccttcagctccgac
aacctctctgctccggaagaggatggcgatttgaacaacatccagatcgccatcgcccgc
atccaatccggtgtctcctggctcgccgcgtgcgtcgtcgaccttttcaaccgcagcttg
aagtgtcggaagcagaaggtcaaccaggccgtcaagccggtcgggaatcacatagaaagc
aatggtgggatcttcggacgctacggcgaaaagtatttcgtgccagaggaagacagctac
atgacaaatcccaaattgacggtcatcgttccgattgcacccggagagtcggatgtggag
ttcttggaggaggaggaggtttctgagtcttcagaggatgaagacaacaaaccggaggtt
atcagcctatcagagggcagcacggtggatctgaggaagcctggagaagaaatggacaac
ttatcagaggtggctgaagagagcatggagccagtggaatgcttcccagaattgtgcacg
aggcactgtcattgctgtacagtggatacgagccgtggcctgggccgggcctggtggagg
ctgaggaagacctgctaccagattgtagaacacagctggtttgagactttcattatcttc
atgatcctgctcagcagtggggctctggcctttgaagacatctacattgagaagagaaag
gttgtgaaggtggtgctggagtatgctgacaagatcttctcctacatctttgtgctggag
atgttcctcaagtggattgcttacggcttcaagaagtatttcaccaactactggtgctgg
ctggactttctcatcgtggacgtgtccttgataagcctggttgcaaattcactgggatat
tccgactttgctgccatcaagtccctgaggactctgcgggctttgaggcctctcagagct
ctgtccagattcgaaggcatgcgggtggtcgtgaacgccctcatcggagccatcccgtcc
attatgaatgtgctgctcgtgtgtctcatcttctggctcatcttcagcatcatgggggtc
aacctgtttgctggaaagtttgggaaatgcgtgaacaggacgggcttcattcacagtgcc
tccgtcgtcaacaacaagtcggagtgcctctctatgaatgacacccagttctactggacc
aaagtgaaggtcaactttgacaacgtgggacttggctacctttcccttctgcaagtggct
acatttaaaggatggatggaaataatgcatgcagcggtggactcaagaggagttgaggaa
caacccatcagagaaataaacctctacatgtacctctactttgtcgtcttcatcatattc
ggctccttcttcaccctcaatctcttcattggcgtcattattgacaatttcaatcagcag
aaaagaaagttaggtgggcaggatatcttcatgactgaagaacagaagaagtactacaac
gctatgaagaagttgggatctaaaaagcctcaaaagccaataccaaggcctgcgaatttt
ctccaggccttcttcttcgatctcgtggccaagcaagcctttgacatcataatcatgatg
ctcatcatcgtcaacatggtgaccatgatggtggaaaccgacgagcagtcagagcgcaag
gaatccatcctcaacaagatcaacctggtcttcatcgtgatcttcaccaccgaatgcctg
atcaagatcttcgccctgcgctgttatttcttcacagtagcgtggaacatctttgatttt
gtggtgatagtcctctctatcgtgggaattgttctcgccgacatcattgagaagtacttt
gtatctccgaccctgtttcgggtcatcagactggcaaggataggacgggtactccgactt
atacgtgcagccaaaggaataaggactctcctgtttgccttaatgatgtccatgccagca
ctgttcaacatcggcctcctgctgttcctcgtcatgttcatctacgcgatcttcggcatg
gcgaactttgcctacgtgaaaaagacagacggccttgacgacatgttcaactttgagacc
ttcgggaatagcatgatctgcctttttcagatcagcacctctgcgggttgggacaacctc
ctgagtcccatcatggccagctccccagaggagtgtgacctccgctatgtcaacaccggc
accaacacccggggcaactgtggcagcccctcaatgggtatagcgttctttgtaagttac
atcatcatttctttcctcatcgtggtgaacatgtacatagctatcattctggagaacttc
agcgtggccacggaggagagcacagagccgctgagcgaggatgactttgaaatgttttac
gaggtgtgggagaagtttgattctgaggccacgcagttcattgagttttccatgctgtcg
atcttcgccgacaccttgtcggagccgctgcgcatagctaagcccaacaggatcaagctg
atctccatggaccttcccatggtcagcggggataggatccactgcctggacatcctgttt
gccttcacaaagcgcgtcctgggggagtcgggcgagatggacgccttgaagcagcagatg
gaggagaagttcatgatgaccaacccctccaaggtctcgcacgagcccatcacgtcgacg
ctgcggcgcagactggaagaggtgtccgcgaccgtcatccagaggtgttacaggaggcat
ctggtgcgccggcacatgaagcaggcgtcctacctctacaggcagatcaactacgagact
gcagtggatgtggagaacgctccagaaacggaggggctgatagcctccatgatgcatcac
tatggactcgtcgggctggagattgcacagacaacggaggacgcgctactgtcctcgcca
ccgtcctatgacagcgtgaccagagcgaccagtgagctctctgaggtcgccaggtccgtg
tacagaggctgtgaactcggggagcctgctgagagctacgaggaaactttcctttag
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integrated database retrieval system
