Gasterosteus aculeatus (three-spined stickleback): 120816518
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Entry
120816518 CDS
T07457
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120816518 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120816518 (rorcb)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120816518 (rorcb)
Nuclear receptors [BR:
gat03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120816518 (rorcb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
E217_GP41
Motif
Other DBs
NCBI-GeneID:
120816518
NCBI-ProteinID:
XP_040028113
UniProt:
A0AAQ4PWF6
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Position
III:complement(7544336..7556429)
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AA seq
519 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDGNHTQTQCTVKFGRMSKKQRDSLYAEVQKHQKSQECAGSAGG
GATALSVPKEEGVCGGGGGGGGGGGGEDSKEALSRSYSSGGSSSTLSDLEDIAALPDLFD
LPLTPEGSGEYCGLELLGGGASAGNTSNSSSASSSSSSSSNQNSPQPTMPDGADAAGIHL
LCAHSLTHPLLKRTHALLDHLPEDCSITELERITQSILKSHLETCQYSAEDMKRFTWAQY
TPEETRAFQSKSAEWMWQQCAHHITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEV
LLIRMCRAFNVNNSSIFFNGKFALAQFFKALGCDDLVSAVFDLGKGLCRLQLSDEEMALF
SAAVLLSPDRHWLTEGQKIKKLQEKVYLALQHSLHKSGASEEKMDKIVSKLPMMKSICNL
HVDKLEFFRLVHPETAYSFPPLYREVFGSEMSLPDSTNG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagatcgaggtcattccctgtaagatctgtggagataagtcctcaggaatc
cactatggagtcatcacctgcgaaggctgcaagggtttcttccggcgcagccagcagaac
aacgccatgtactcgtgttcccgccagaggaactgcctgatcgaccgaactaaccgcaac
cgctgccagcactgccgcctacagaaatgtctggctttgggcatgagcagagacggtaac
cacacgcaaacgcaatgtacggtcaaattcggccgcatgtccaagaagcagcgcgacagc
ctctacgctgaagtgcaaaagcaccaaaagtcccaggagtgtgcgggctccgctggcggg
ggcgctactgctctgtccgtgcccaaggaggagggcgtctgtggtggtggaggtggaggt
ggtggtggtggtggaggggaggacagcaaggaggctctgagtcggtcctacagcagcggg
ggctccagctccaccctcagcgacctagaggacatcgcagcgctgccggacctgtttgac
ctgccgctgacccccgaggggtccggcgagtactgcggcctggagctgctgggcggcgga
gccagcgcggggaacacctccaactcatcttccgcctcttcctcctcgtcctcctcgtcc
aatcagaattccccgcagccgacaatgccggacggagcggacgccgccgggatccacctc
ctgtgcgcacactctctcacgcaccctctgctgaagcgcacgcatgcgctgctggatcat
ctgcccgaggactgctccataacagaacttgagcgcatcactcagagtattctcaagtct
cacttggagacatgtcagtacagcgctgaagacatgaagagattcacctgggcacaatac
acacctgaggaaacgcgtgcttttcaaagcaagtcagctgagtggatgtggcagcagtgt
gcacaccacatcaccaacgccattcagtacgtggtggagtttgccaagcgtatcgctggc
ttcatggacttgtgccagaatgaccagattatattgctgaaagcaggctgtctggaggtc
ctgctgatccgcatgtgccgagctttcaacgtcaacaacagcagcattttcttcaatgga
aagttcgccctcgctcagttcttcaaagcacttggttgtgatgacctggtcagcgcggtg
tttgacctgggaaaaggactctgccgtctccagctgtctgatgaggagatggctctgttt
agcgctgccgttctattatctccagatcggcactggctaacagaaggccaaaaaataaaa
aaactccaggagaaggtgtacctggctctgcagcacagtctacacaagagtggagcttca
gaagagaaaatggacaagattgtgtccaagctgcccatgatgaagtctatctgcaacctc
cacgtggataaactagagtttttccgtttggtccacccagagaccgcctacagcttccca
ccactgtaccgggaagtgttcggcagtgagatgtctctgccggactccaccaacggctag
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