Gasterosteus aculeatus (three-spined stickleback): 120816546
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Entry
120816546 CDS
T07457
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120816546 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120816546 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120816546 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Adeno_E3_CR1
C2-set_3
C2-set_2
Mt_ATP_synt
Motif
Other DBs
NCBI-GeneID:
120816546
NCBI-ProteinID:
XP_040028165
UniProt:
A0AAQ4Q9C1
LinkDB
All DBs
Position
III:complement(12904904..12922677)
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AA seq
1515 aa
AA seq
DB search
MSGSVQVTQQLQQLQQQHQQQHQLQHQHQQHESSCYLSSKSSVKQHSFSTYKTSSRRQKT
TVKTEKRQAVVKLSPLPARAKRTYLAMDTDKEVIGYVIPVFRANHEDVRGLMEAREEEVT
EEGIHYVAMRNLFVREAREAVDVKVETKTRSTHIRESAERMELSKTMEEWAEFRKKMNPD
SLTHRPEFIVKPRGQTVWEGGAVRLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYAIESS
FNMHSLEIKNCDFMDTAQYHASALNVKGEASSVATIVVKRFQEGEEAGPLDPKPHGFCAE
HGVTFETTIIDKFEVAFGREGETLSLGCTVIIYPTVKKYQPEVVWSRNSVPLKPSKWVHT
HWSGQRATLTLVHLNKEDEGMYTLRVNTKSGFDTYSAYVYVRDADVEVEGVPVAPLDVRC
HDANKDYVVVTWKQPAVEGSSSILGYFIDRCEVGTHHWAQCNDAPVKYARFPVTGLVEGR
SYVFRVRATNKEGVSRPSRVSDAVVAMDPSDRARLRAGPSAPWTGMIKFTEEDPTVGVVP
GEPSDVVVTEATKSYVVLAWKPPVQRGHEGVMYYIEKCISGTETWQRVNSGMPVKSPRFA
LFDLAEGKSYSFRVRCCNSSGVGEASVSTGEITVGDKLDLPSSPGNPVATRNTDTSVVVF
WGACKDVKYLVGYYVEYSEVGTDVWIPCNNKPVKQTRFVCHGLTTGSNCMFRVKAVNAAG
YSQSSSSSEAVVVKAAISVPGRATGVTVLEAVKDTMMLTWTEPASKGGADVRGYFVDYRT
VKGHVVGKWHEMNLKALTTTSYKAENLKENVFYQFQVRAMNMAGVSEASLPTSALECKEW
TITVAGPPVGLHVLEVRDTSAVVLWERPAFDGRTPVNGYYLDIKEASAGEKGWKAAHEKA
NKTKYMKVTGLKPGASYDFRVRAQNLAGVGKPSAVLGPILAQTRPGTNEIHVDVDDDGVI
SMIFECAEMKEGSEFVWSKNYQTVTDTSRLTLVTERGRSRAIFNSPSLEDLGTFSCVVTN
TDGFSSSYTLTEEDLKRLLDISHDHKFPVIPFKNEMAIELLEKGRVRFWTQVEKCTSACQ
VDYVFNDVIITEEEKYTVNFDKSTGIIEMFMDSLEVSDEGTFTFDLVDGKAKGATSLVLI
GDEFRELQKKSEFERAEWVRKQGPHFVEYLDFTVTPECNVLLKCKIGNVRAETEITWSKD
NIEIAEDDEDAQKIERKDGDLTFNIGKWVIKQEKPKGKEGKKPSAEDVPPPPRPKISKAD
AGTYQVLLRDDRGKDKSTFNLTDAGYQAVMNELFRVIANSSCDIKVISTEHGIILYSMIT
YYNEELRVGWLHKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYTMDIFDGKDGVKR
VFDLTGKAWEEAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPAP
EVSWTKNDRELVCDERYQLKFEHGKFASITIAAVTTADSGKYALLVKNKYGTEAGEFTVS
VYNPDDEENKEGKKG
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagtacaagtgacgcagcagctgcagcagctgcagcagcagcatcagcag
cagcatcagctgcagcatcagcatcagcagcatgagagcagctgttacctgagctccaag
tcgtccgttaaacagcactcgttctccacgtacaagaccagcagccgtcgccagaagacc
actgtgaagacggagaagcggcaggcggtggtcaagctgagcccgctgcccgcgagagcc
aaacgcacctacctggccatggacacggacaaggaagtcatcggctacgtcattcccgta
ttcagagccaatcacgaggatgttcgcggcctgatggaggcgcgggaggaggaggtcacg
gaggagggcattcactatgtggccatgaggaacctgtttgtcagggaggccagggaggct
gtggacgttaaagtggagacgaaaaccagatcaacgcacatccgggagtccgccgaacgc
atggagctcagcaagacgatggaggagtgggcggagttccgtaagaagatgaacccagac
agcctgacgcaccgtccggagttcatcgtcaagccccgtgggcaaacagtgtgggagggc
ggggccgtcaggctgcactgcaccgtggccggatggcctaagcccaggatcgcatggtac
aaaaacaacgtcctcattgatgccaaggcccacccggagaagtacgcaatcgagagcagt
ttcaacatgcactccctggagatcaagaactgtgatttcatggacactgctcagtatcac
gcctctgccctcaacgtgaaaggcgaagcttcttccgtggccaccatcgttgtcaaaagg
ttccaggagggcgaggaagcaggcccactcgatcccaaaccacatggtttctgcgctgag
catggcgtcacattcgaaacaaccattattgacaaattcgaagtggcctttggccgtgaa
ggtgaaacattgagtctgggctgcaccgtcatcatttaccccactgtgaaaaagtaccag
cctgaggtcgtgtggtccagaaactctgtccccctgaagccctctaagtgggtgcacacc
cactggtccggccaacgagccaccctcacacttgtccacctcaacaaggaggacgagggc
atgtacaccctgcgtgtcaacaccaaatctggctttgacacctactccgcgtatgtgtat
gtcagagatgccgatgtggaggtggagggcgttcccgtggcccccctggatgtgcgctgc
cacgacgccaacaaggactacgtggtggtgacctggaagcagccagcggtggagggcagc
agctccatcctgggatacttcatcgacaggtgcgaggtgggcactcaccactgggctcag
tgtaacgacgccccggtgaagtacgcccgcttccccgtcactggactggtggaggggcgc
tcttacgtcttcagggtgcgggccacgaacaaggaaggagtcagccgcccgtcccgcgtc
tccgacgccgtggttgccatggatccctcggacagggcccgcctcagagccggcccgtca
gctccttggactggaatgattaagttcaccgaggaggatcccactgtgggagttgtcccc
ggagagccttctgacgtggtggtgactgaggccaccaagagctacgtggtgctcgcctgg
aagcctccagtccagaggggtcatgaaggagtcatgtattacattgagaagtgtatctca
gggacagagacctggcagagggtgaactctggcatgccagtcaagtctccccgcttcgcc
ctgttcgacttggccgaggggaaatcctacagcttccgcgtgcgctgctgcaactcctct
ggtgtgggcgaggcctccgtgtccacaggagagatcacggtgggagataaactggacctt
ccctcatcccccggcaatccagtggccaccaggaacactgacacctcagtggtggtcttc
tggggggcctgtaaggatgttaaatacctggttggatactacgttgaatatagcgaggtg
ggcaccgatgtgtggataccttgtaacaacaaacccgtcaagcagaccaggtttgtgtgc
cacggcctgactacggggtcaaactgcatgtttcgggtcaaagccgtcaacgctgctgga
tacagccagagctcctccagttccgaggccgtggttgtgaaagccgccatctccgtccct
ggaagggccaccggtgtgaccgtgctggaggccgtgaaggacaccatgatgctgacctgg
actgaacccgctagcaagggaggagcggatgtccgaggatactttgtggactacaggact
gtgaaggggcacgttgttggaaaatggcatgaaatgaacctcaaggcattgactaccacc
tcttataaagctgagaacttgaaggagaacgtcttctaccagttccaggtgcgcgctatg
aacatggcaggtgtgagtgaagcctctctgcccacctcagctctggagtgcaaggagtgg
accatcactgtggcaggtcctcctgttggtcttcacgtgctggaggtccgggacacctcc
gccgtggtcctgtgggagcgacccgccttcgatggccgcacacctgtcaacggctactac
ctggacatcaaggaagcctctgcgggagagaaaggctggaaggctgctcacgaaaaggcc
aacaagactaaatacatgaaggtgacggggctgaagccgggtgcgtcctacgacttccgc
gtgcgtgctcaaaacctggctggagtcggaaagccatcagcagtcttgggtccgatcctg
gcccagactcgccccggcaccaatgagattcacgtggacgttgacgatgatggcgtcatc
tcgatgatctttgagtgcgctgagatgaaggagggctctgagtttgtttggtccaagaat
taccagaccgtgacagacacctctcgcctgacgctcgtcactgaacggggaaggtccaga
gctatcttcaacagtccctcactggaggatctgggcaccttctcctgtgtggtcaccaac
actgacggcttctcctccagctacacactcactgaggaggatctcaagcgtcttctggac
atcagccatgaccacaagttccctgttattcccttcaagaatgaaatggccattgagctg
ctggagaagggtcgcgttcgtttctggactcaggtggagaagtgcacttcggcctgccaa
gtggattatgtctttaacgatgtcatcattaccgaggaagagaaatacacagtgaacttc
gacaagtccaccggcatcatcgaaatgttcatggactctctggaggtcagcgatgaggga
acattcacctttgacctggtggatggcaaggctaagggtgcaaccagcctggtgctcatt
ggagatgagttcagggagcttcagaagaagtctgaatttgagagggcagaatgggtcagg
aaacaaggtcctcactttgtcgagtaccttgacttcaccgttactccagaatgtaatgtg
ctgttgaagtgcaagataggaaatgtcagagcagagactgagatcacctggtctaaggac
aacatcgagatcgcagaggatgatgaggacgctcagaaaatcgagagaaaggacggcgat
ctgacctttaatatcggaaagtgggtaattaagcaggagaaaccgaaaggaaaagaagga
aaaaagccatctgcagaggacgttcccccgccgccaagacccaaaatctccaaggcggat
gcaggcacttaccaggtcctgctgagggacgacagaggcaaagacaagagcaccttcaat
ttgacggacgcaggataccaagccgtaatgaacgagctgttcagggttatcgccaactcc
tcctgtgatatcaaagtgatcagtactgaacatggcatcatcctctactccatgatcacg
tattacaatgaggaactgcgcgtcgggtggctccacaaagatgcgaagattgcagcctca
gagagagtaaagtctggagtcacaggagagcagctttggcttaagatcaatgagcccact
gagaaggacaaaggcaaatacaccatggacatcttcgatggcaaggacggtgtaaagaga
gtctttgatctgactggcaaggcttgggaagaggcatttgaagaattccaaaggctcaag
gcggcagcaatcgcagagagaaatcgtgctcgtgttgttggaggcctgccagatgtggtt
gcgatccaagagggcaagtcgctgaacctgaccggcaacgtctggggcgagccggcacct
gaggtcagctggacgaagaacgacagggagctggtgtgcgacgagcgctaccagctcaag
ttcgagcacggcaagttcgccagcatcacgatcgccgccgtcaccacggctgactctggc
aaatacgccctgctggtcaaaaacaagtacggcacggaggccggcgagttcaccgtcagc
gtctacaacccggacgacgaagagaacaaggaggggaagaaaggctaa
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