Gasterosteus aculeatus (three-spined stickleback): 120816569
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Entry
120816569 CDS
T07457
Symbol
wdr47a
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 47
KO
K24746
WD repeat-containing protein 47
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120816569 (wdr47a)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120816569 (wdr47a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
WDR47_COR
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
LisH_TPL
Beta-prop_EML
Beta-prop_NOL10_N
Beta-prop_SCAP
TPR1-like_2nd
DSE1_N
WDR90_beta-prop_4th
Beta-prop_EIPR1
Vir_act_alpha_C
ASA1
MCM22_C
WD40_MABP1-WDR62_1st
eIF3h_C
Motif
Other DBs
NCBI-GeneID:
120816569
NCBI-ProteinID:
XP_040028212
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All DBs
Position
3:6959742..6969700
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AA seq
914 aa
AA seq
DB search
MTAEETINVKEVEIIKAILDFLNSRKLHISMLALEKESGVINGLYSDDMLFLRQLVLDGQ
WDEVLQFIQPLECMDKFDRKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVKC
LHALEEFCPSKDDYSKLCLLLTLPRLTHHAEFKDWNPSTARVQCFDEACTMVAEFIPADR
KLSEAGFKASRDRLFQLLLKGVLYECCVEFCQSKATGEEMPEGEVLLGVDMLCGNGCDDL
DLSLLSWMQNLSHTVFSCAFEQKQLNIHVDRLVKPTKTGYGDLLTPLISKLSPYPSSPLR
RPQSADTYMSRSLNPALDGLSFGLSGXDKRASGGETAPGKGVSPMSHSFANFHYPGARWQ
SLNRSLMMESTDCHSISEESPETSRTDTPVDKMMGSGGTQNLRPSPAPGEDAPSAAAAAA
DRNELRDSTEKYEEYYRQRLRVQQHLEQKQQQRQLYQQMLLEGGVQHEPPPSEMQHSLTE
KFLNRSIQKLEELNVGMEDLGEEVKSLTQQCNGNTPTSEDNKEPPSVTPEQTRGGGVLSS
TPQRAAAGRPVQPPNESPVLSQSGQKQKGSPQCDSPGSLSRSKEGDKPKRLFVPVHTLED
TQAIRAVAFHPSGSLYAVGSNSKTLRVCAYPETLDSSGSSPIKQPVVRFKRNKHHKGSIY
CAAWSHCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGA
ILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYSWGGWMIASGSQDKTVRFWDIRV
PSCVRVVGTAFHGSGSPVATVAVDPSGRLLATGQEDSACMLYDIRGGRIVQVYRPHTSDV
RSIRFSPGAHYLLTGSYDNKVIVSNLQGDLTKPLPQTVVGEHGDKVIQCRWHPQDLSFLS
SSADRTVTLWTHNP
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggaggaaaccataaacgtgaaggaggtggagatcatcaaggcgatcctggac
tttctgaactccaggaagttgcacatcagcatgttggctctggagaaggagagcggcgtc
atcaacgggctctactccgacgacatgctcttcctcaggcaactggtgctggatggccag
tgggacgaggtgttgcagttcattcagcctttggagtgcatggataagtttgacagaaaa
aggtttcgttacatcatcctcaagcagaagtttctcgaggctctgtgcgttaacaacgcc
atgtctgcagaagacgaaccgcagcatttggagttcaccatgcaggaagcagtgaagtgt
ctccacgctctggaggagttctgtccctctaaagatgactacagcaaactgtgtctgctc
ctcacgctgcctcgcctcacacaccatgctgagttcaaggactggaacccgagcacggcc
agggtgcagtgtttcgatgaggcctgcaccatggtagcggagttcatccctgccgaccgg
aagctgagcgaggctggattcaaggccagcagggaccgactcttccagctgctcctcaag
ggagtcctctatgagtgctgtgtggagttctgccagagcaaggcgacgggggaggagatg
cccgagggcgaggtcctcctcggcgtcgacatgctttgcggtaacggctgtgacgacctg
gacctgtctctgctctcctggatgcagaacctgtcccacaccgtcttctcctgcgccttc
gagcagaagcaactcaacatccacgtggaccgcctggtcaagcccaccaagaccggctac
ggagacctcctcaccccgctcatcagcaagctgtctccgtacccgtcgtccccgctgcgc
cggccccagtccgccgacacctacatgtcccgctccttgaaccccgcgctggacgggctg
tccttcggcctgtccggcncagacaagagagcgagcggcggggagacggcgccaggcaaa
ggggtctctcccatgtcccactcctttgccaactttcactacccgggagcacgctggcag
agcctgaacaggagtctcatgatggagagcaccgactgccacagcatctccgaggaatcc
cctgaaacgtcgaggacggacacgcctgtggataagatgatgggctcgggcgggactcag
aacctgcgcccttccccggctccgggcgaggacgctccgtcagccgccgccgccgccgcc
gacaggaacgagcttcgtgactcaacagagaagtatgaggagtactatcggcaacgcctc
cgcgtgcagcagcacctggagcagaagcagcagcagaggcaattgtaccagcagatgcta
ctggaggggggggtccagcacgagcccccgcccagcgaaatgcagcacagcctcaccgag
aagttcctcaacaggtccatccagaagctggaggagctgaatgtggggatggaggacctc
ggggaggaggtgaagtctctgacccagcagtgcaacgggaacacacccacctctgaggac
aacaaggagcctccatccgtgacgccggagcagacgcgagggggaggggtgctcagcagc
accccgcagcgcgccgcggcggggcgcccggttcagcctcccaacgagtcgcccgtcctg
tcccagagtggacagaaacaaaaaggaagtccacaatgtgactcaccgggctccttgtcc
cgaagcaaagagggcgacaaacccaaaaggctgtttgtgcccgtgcacactttagaagat
actcaagccattcgagctgtcgcctttcacccgtctggttctctctacgctgttgggtcc
aactccaaaactctacgtgtgtgtgcttatccagaaacattggactcaagcggttccagt
ccaataaagcagcccgtcgtccgcttcaagaggaacaaacaccacaaagggtccatctac
tgcgcggcctggagccactgtgggcagctgctggcgaccggctccaatgacaaatatgtc
aaagtcctcccgttcagtgcagagacgtgcaacgccacaggcccagacctggagttcagc
atgcatgacggcaccatcagagacctggccttcatggagggcccagaaagcggaggagcc
atcttgatcagcgccggagctggagactgtaacatctacaccaccgattgtcagagagga
cagggtctgcacgccctgagcggacacacgggtcacatcctgtctctgtattcatgggga
ggctggatgattgcctccggctctcaagacaagacggtgcgtttctgggacatcagggtg
cccagctgcgtgcgagtagtgggaactgctttccacggctcaggcagtcctgttgccacg
gtagcagtcgatccgagcggtcgtctcctagcaacaggacaggaagacagtgcgtgcatg
ctgtacgacatccgaggaggacgaatcgtccaggtgtatcggccgcacaccagcgatgtg
cgatccatccgcttctccccgggagcacattacctgctgaccggctcctacgacaataag
gtcatagtgtccaacctgcagggcgacctgaccaagccgctgcctcagaccgtggtgggg
gagcacggcgacaaggtgattcagtgtcgatggcatccacaagacctgtccttcctctcg
tcctcggctgaccgcaccgtcacactgtggacacacaacccgtaa
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