Gasterosteus aculeatus (three-spined stickleback): 120816619
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Entry
120816619 CDS
T07457
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04382
Cornified envelope formation
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
gat04514
Cell adhesion molecules
gat04810
Regulation of actin cytoskeleton
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120816619
04514 Cell adhesion molecules
120816619
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120816619
09142 Cell motility
04820 Cytoskeleton in muscle cells
120816619
04810 Regulation of actin cytoskeleton
120816619
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120816619
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120816619
04515 Cell adhesion molecules [BR:
gat04515
]
120816619
04090 CD molecules [BR:
gat04090
]
120816619
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120816619
Exosomal proteins of breast milk
120816619
Cell adhesion molecules [BR:
gat04515
]
Integrins
Integrin alpha subunits
120816619
CD molecules [BR:
gat04090
]
Proteins
120816619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
DUF11
Motif
Other DBs
NCBI-GeneID:
120816619
NCBI-ProteinID:
XP_040028299
UniProt:
G3PRV2
LinkDB
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Position
III:complement(7972900..7985137)
Genome browser
AA seq
1080 aa
AA seq
DB search
MEVGSPRALWTAVFLLACGRLSAFNLDTGDVVRKDGEAGSLFGFSLAMHRQLQPVDKRIL
LVGAPTAKGLAGQKSKVTGGLYNCDVTSASRGCSRVMFDNNEDTGTESKENQWMGVIVKS
QGPGGKILTCAHRYQRRKKDVDSRDIIGRCYVLSESLTIDPRVPEEGKDWHFCAGRPKTH
EMFGSCQQGMSATFDKDYHYYIFGAPGAYNWKGVVRLEQNNMTLLTMGVYSDGPFETGDE
NLKDPEMVPAPPNSFLGFSLDSSKALTKMGQLTVVAGAPRANHSGAVVLLKKGDDTTKAL
LEEFTLQGEGLASSFGYDLTVLDLNGDKWLDIVVGAPQYFEKDGEIGGAVYVYVNKAGKW
NQVTPIRIDGTKDSMFGQAVENLGDINQDGFEDFAVGAPYENEGAGAVFVYHGGANGLHS
KTASQVLSGETLGVRQFGYSLAGNMDLDRNAYPDLAVGSLSDSVFVFKARPVISIKKEIK
FSPKEIDLTKKNCGSGVCLEVEACFTYTANPKDYGPSLTVEYSLAADADKTRNNFKSRAT
FKEPSENGHQSKGTITMDTKGKEKCIKRQLEIQENIQDKLHGIPIDVSVDIKGSGRKRRQ
SSSSVTPVLNANEPSTIRSEVQFLKEGCGSDNVCRSNLKVMYRYGYMITDDTFTPLQLEG
DTPVISLSEQKDIALEVKVSNLNGDDAHEASVVALFPRALSYSAYSVADGGQVTCKANKN
GSRADCELGNPFKRNSEATFYIILGTSRISLDTTELEIDLQLETTSNQDNIAPVKAKAKV
LITLQLSVLGQAEPSQVYFSGKVKGEAAMKQESDIGSAITHNFRIINLGKRLKDFGTATL
DIHWPKEVASGKWLLYLMNISSTGVDMECSPKTAINPLNKEPSDTRVRRAAGIPPRSEEG
TISRLLDTKKFKTLTCLEGAKCVTIKCPLRGLDSNAVITLKSRLWDSTFIEDYSSLHRVE
VIVKASLHVDTTSKNTVLTNAETQVKLTVFPERVEARSGGVPWWIIVLSILFALLLLALL
AFLLWKSVFFKRDRNEDKVPIYNAVRIKREERGINPRNGHWENLEKKPWMTTWHDKEHYS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcggatccccgcgcgcgctgtggaccgccgtcttcctcctggcgtgcggacgc
ctgtcggcattcaacctggacaccggggacgtggtgcggaaggacggggaagcgggcagc
ttgttcggcttctcgctcgccatgcaccggcagctgcagccggtggacaagcgaatactg
ctggtcggcgccccgacagccaaaggattggcgggtcaaaaatccaaagtgacgggggga
ctctacaactgtgacgtgacctccgcctcacgtggttgcagcagagtgatgtttgacaac
aacgaggatactggaactgaaagcaaagaaaaccagtggatgggagtgatagtcaaaagt
cagggcccaggaggcaagattctgacctgtgcccatcgctaccagcggcggaaaaaggac
gtggattcccgtgacatcatcggccgctgctacgtgctgagtgagtccttgactattgat
ccaagggtgccagaagaggggaaagactggcatttctgtgccggccggcctaaaacccac
gagatgtttggctcctgccagcagggcatgtctgccacctttgacaaagactaccactac
tatatctttggagctcctggcgcatacaactggaaaggggtggtacgcttggaacaaaat
aacatgacattacttactatgggtgtctattccgacggaccttttgagaccggagatgag
aacctcaaagaccctgagatggtccccgccccgcccaacagcttcctgggcttttccttg
gactcgagtaaggctctgaccaagatgggccagctcacagtcgtggccggagctcccaga
gccaatcacagtggagccgtggtgctgctgaagaagggcgatgacacgaccaaagcgttg
ctagaagagttcaccctgcaaggggaggggctggcctcgtcgttcggctacgatctgacc
gtgctggatctcaacggggacaagtggctggacatagtggtgggagcccctcagtacttt
gagaaggatggggaaataggaggagccgtctacgtctacgtcaacaaagccgggaagtgg
aaccaagtcacccccatcagaatagatggaactaaggactccatgtttggtcaggctgtg
gaaaacctgggggacatcaatcaggatggtttcgaggatttcgcagttggagctccttat
gagaatgaaggcgcaggggctgtatttgtctaccatggaggagccaacggtctccactct
aaaacagcctcacaggttttgtccggcgagactttaggggtgagacagtttggctactcg
ttggcaggaaacatggacctggacaggaacgcttaccccgacttggctgtcggatcgctc
tctgactccgtctttgtcttcaaagcccgtccagtaattagcatcaagaaggaaatcaag
ttctcgccgaaggaaatcgacctcaccaaaaagaactgtggcagcggcgtctgcttggag
gttgaggcctgcttcacctacactgccaaccccaaggattacggtcccagtctgaccgtg
gaatactccctcgcggcagacgccgacaagacgcgtaacaatttcaaatccagggccacc
ttcaaagagccttcggaaaatggccaccagtccaaagggaccatcaccatggacaccaaa
ggaaaggaaaagtgcattaagcgtcagcttgagatccaggaaaatattcaagacaagctg
cacgggatccccatcgacgtgtccgtggacatcaagggcagcggccgtaaacgcaggcag
agctcatcctcggtgacacctgtcctcaacgccaatgagccatcgacgattcgctcagag
gtgcaattcctgaaggagggatgcggtagcgacaatgtttgccgaagcaacttgaaagtg
atgtatcggtacggctacatgataacggacgacacattcactccgttacaactggagggc
gacacgccggtgatctcgctcagtgagcagaaggacatcgccttggaggtcaaagtgtcc
aatctaaatggagatgacgcgcacgaagcctctgtggtcgccctcttcccgcgcgccctt
tcctactctgcttacagcgttgcggatggcgggcaggtaacctgcaaagccaataaaaat
ggttctcgggccgattgtgagctcggaaaccccttcaaacgcaactcagaggcaaccttc
tacattattctgggtacatcacgcatctctctagatactactgagttggagattgatctt
cagctagaaacgacaagcaatcaagataacattgcccccgttaaagcaaaggcaaaggtg
ctcatcacgttgcagctgtctgtattaggacaagctgagccgtcccaggtgtacttttca
ggaaaggtcaaaggtgaggcagccatgaagcaagaaagtgacattggcagcgccatcaca
cacaacttcagaataatcaatctgggaaagcgcttgaaagactttggcacggccaccctc
gacatccactggccaaaagaagtagcgtcagggaaatggcttctgtacctgatgaatatc
agctccactggagtggacatggagtgctctcctaaaacggcgatcaaccctcttaacaag
gaaccaagtgacaccagggtgagaagagcagcaggaatccccccaagaagtgaagaaggc
accatttcacgtttactcgacacaaagaaatttaaaactctgacctgtctcgaaggggcc
aaatgtgtgacgataaagtgccccctacggggcttggacagtaatgccgtcatcactctc
aaatctcgcctctgggacagcacattcatagaggattactcctcgctgcatcgcgtggag
gtgatcgtaaaggcctctctgcatgtcgataccacatcaaagaacacagtactaacaaat
gctgagacacaggtgaagctgacggtgttcccagagagggtggaggcccggtccggagga
gtgccgtggtggatcatcgtgctgtccatcctgttcgcgctgctgctgttggccctgttg
gctttccttctgtggaagtctgtcttttttaagcgggacagaaatgaagacaaggttcca
atttacaacgctgttcgcatcaagcgggaggagaggggaataaaccccaggaatggacac
tgggagaacctggaaaagaagccctggatgacaacctggcatgacaaggaacattattct
taa
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