Gasterosteus aculeatus (three-spined stickleback): 120816621
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Entry
120816621 CDS
T07457
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145
Phagosome
gat04814
Motor proteins
gat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120816621
09142 Cell motility
04814 Motor proteins
120816621
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120816621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120816621
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120816621
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
120816621
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120816621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Nbas_N
Knl1_RWD_C
Motif
Other DBs
NCBI-GeneID:
120816621
NCBI-ProteinID:
XP_040028304
LinkDB
All DBs
Position
III:complement(8004920..8012397)
Genome browser
AA seq
650 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDSKRGAEAGGGSSGGHEDSDLER
KRREAEALLQSVGITPDIHHAQPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGD
GNAGPRTLHWDPDPSTLQLHSDSELMGRGAVRLGMSKVTQVDFPPKESVSYSKETQTPTE
TQTHTDQKADEEEDEEITGPVAEDTQEDKDEHGEQPDEDTPKELTEEEKLQVLHSEDFLS
FFERGSRIVERALAEHVDVCFDYSGRDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTC
LDWSPQYPELLVASYNNNEDAPHEPDGVALVWNLKYKKSTPEYIFQCQSEVMSAGFAKFH
PNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISISTD
GKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGS
KAGITEVFEGHHGPVTGLSCHSAGGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSC
DYVYDAMWSPTHPALFACVDLAGRLDLWNLNNDTEVPTASVCVEGAPAVNRVRWAHSGKE
IATGDSDGQVQVYDVGEQICVPKADEWTRFVRTLTEINESRDEAEELANA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagcgagctgaaggccgaactggagcggaagaagcagcggatcgcgcag
attcgagaggagaagaagagaaaagaggaagagaagaaaaagaaggatggagactccaag
cgaggagctgaggccggtgggggatcctcaggtggccacgaggactccgacctggagagg
aagaggagggaggcggaggcgctgctgcagagtgtcggcatcacccccgacatccaccac
gctcagcccctgagggtagtaacagaagatacatgtctgtttcactacctagtccccgcc
cccatgtctccctccaacaaatcagtgggcagcgatgcaggaagccaagattccggggat
ggaaacgcaggaccaaggacattgcattgggatcctgacccctctactctgcagctgcac
tccgactctgagctgatggggcgtggagccgtgaggctgggaatgtccaaagtgacccag
gtggattttcccccgaaggaaagtgtgtcctattccaaagaaacacagacacccaccgag
acacagacacacaccgatcaaaaagcagatgaggaagaggatgaggagatcaccggccca
gttgcagaggacacccaggaggataaagacgaacatggggaacagccagatgaggacacg
cccaaagagctcacagaggaagagaagctgcaggtcctgcactccgaggacttcctatcc
ttcttcgaacgaggcagcagaatcgtggagcgagcgctcgccgagcatgtggacgtctgc
ttcgactacagcggcagagacctggaagacaaagagggagatctgcaagccggcgcaaag
ctggtgctcaacagacagtttgccgatgagcgctggactaaaaaccgagtggtcacctgc
ctggactggtcacctcagtatccagagctgctggtggcctcgtacaacaacaacgaggac
gctccccatgagcccgacggagtggcgctggtctggaacctcaagtacaagaagagcaca
ccagagtacatcttccaatgccagtccgaggtgatgtcagccgggttcgcaaagttccac
cccaacctggtggtgggcgggacgtactccggacagattgtcttgtgggacaacaggagc
aacaagcgcacccctgttcagagaacgcccctgtctgcggcagcgcacacacacccggtt
tactgcgtgaacgtggtgggaacccaaaacgctaacaacctgatcagcatttccaccgac
ggcaagatgtgctcctggagcctggacatgctctcccagccgcaggacagcctggagctg
gtgttcaaacagagcaaagcggtggccgtcacctccatggccttccccctgggcgacgtc
aacaactttgtggtggggagcgaggacggctcagtctacacagcctgtcgccacgggagc
aaagcggggatcaccgaggtgttcgagggccatcacggcccggtgacggggctgagctgt
cacagcgccggaggacccgtcgacttctctcatctcttcatctcctcctcttttgactgg
actgtcaagctgtggagcactaagagcacccgtccgttgtactcgtttgaagacagctgt
gactacgtctacgatgccatgtggtcgccgacgcacccggctctgttcgcctgtgtggac
ctggccggacgcctggacctgtggaacctcaacaatgatacagaagttcccactgccagc
gtgtgtgtggagggcgcgccagcagtgaaccgcgtcagatgggctcactccggtaaagag
atcgccaccggggactcggacgggcaggtgcaggtctacgacgtaggagagcaaatatgc
gtgcccaaggccgacgagtggacgcgcttcgtcaggacgctgaccgagatcaacgagagc
cgagacgaagccgaggagctggccaacgcctga
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